RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 RPH3ALQ9UNE2 315 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 ORC6Q9Y5N6 252 aa2.51□□□□□ -2.01
LIMA1-206ENST00000550611 IGKV1D-8A0A087WSZ0 117 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 DEFB131BA0A096LNP1 70 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 TRAV2A0A0B4J234 112 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 TRAV3A0A0B4J244 114 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 IGHV7-4-1A0A0J9YVY3 117 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 PNMA8CA0A1B0GUJ8 204 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 CENPXA8MT69 81 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 LINC00587B1AMM8 73 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 K7EIM0 57 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 MFNGO00587 321 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 SLC17A2O00624 439 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 TCAPO15273 167 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 MRPS14O60783 128 aaKnown RBP2.5□□□□□ -2.01
LIMA1-206ENST00000550611 NDUFS6O75380 124 aaKnown RBP2.5□□□□□ -2.01
LIMA1-206ENST00000550611 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 SLC22A5O76082 557 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 CA1P00915 261 aaPredicted RBP2.5□□□□□ -2.01
LIMA1-206ENST00000550611 SMR3BP02814 79 aaPredicted RBP2.5□□□□□ -2.01
LIMA1-206ENST00000550611 S100A8P05109 93 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 REG1AP05451 166 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 CTSGP08311 255 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 UCHL1P09936 223 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 DEFA4P12838 97 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 MIFP14174 115 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 HLA-GP17693 338 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 MYL12AP19105 171 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 TAGLN2P37802 199 aaKnown RBP2.5□□□□□ -2.01
LIMA1-206ENST00000550611 ATP5IP56385 69 aaPredicted RBP2.5□□□□□ -2.01
LIMA1-206ENST00000550611 RPL8P62917 257 aaKnown RBP2.5□□□□□ -2.01
LIMA1-206ENST00000550611 ST3GAL4Q11206 333 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 P2RY14Q15391 338 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 POU2AF1Q16633 256 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 GPR107Q5VW38 600 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 MORN3Q6PF18 240 aaPredicted RBP2.5□□□□□ -2.01
LIMA1-206ENST00000550611 ZNF773Q6PK81 442 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 TMEM91Q6ZNR0 172 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 MS4A15Q8N5U1 240 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 FAM24BQ8N5W8 94 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 BPIFCQ8NFQ6 507 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 OR56B1Q8NGI3 324 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 MITD1Q8WV92 249 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 DCUN1D5Q9BTE7 237 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 RHPN1-AS1Q9BWJ2 59 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 MND1Q9BWT6 205 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 OR51M1Q9H341 326 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 VSIRQ9H7M9 311 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 BIN3Q9NQY0 253 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 BET1LQ9NYM9 111 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 PSORS1C1Q9UIG5 152 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 CELA1Q9UNI1 258 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 GPR132Q9UNW8 380 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 RNF24Q9Y225 148 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 DNAH8Q96JB1 4490 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 PKHD1L1Q86WI1 4243 aa2.5□□□□□ -2.01
LIMA1-206ENST00000550611 IGLV2-18A0A075B6J9 118 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 TRAV18A0A075B6X5 111 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 IGHV3OR16-8A0A075B7F1 116 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 IGKV1D-13A0A0B4J2D9 117 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 OR2T8A6NH00 312 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 UPK2O00526 184 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 RBFOX2O43251 390 aaKnown RBP eCLIP2.49□□□□□ -2.01
LIMA1-206ENST00000550611 ZNF207O43670 478 aaKnown RBP2.49□□□□□ -2.01
LIMA1-206ENST00000550611 HRASP01112 189 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 SERPINE2P07093 398 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 STAG3L2P0CL84 134 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 IGKV1-13P0DP09 117 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 HIST1H1DP16402 221 aaKnown RBP2.49□□□□□ -2.01
LIMA1-206ENST00000550611 FUSP35637 526 aaKnown RBP eCLIP2.49□□□□□ -2.01
LIMA1-206ENST00000550611 RPL35P42766 123 aaKnown RBP2.49□□□□□ -2.01
LIMA1-206ENST00000550611 CDKN1BP46527 198 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 TFPI2P48307 235 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 WNT4P56705 351 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 CLDN12P56749 244 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 AP3S2P59780 193 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 DEFB131AP59861 70 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 WT1-ASQ06250 92 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 IL18Q14116 193 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 MSMO1Q15800 293 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 TIMM50Q3ZCQ8 353 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 RNF212Q495C1 297 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 HSD17B12Q53GQ0 312 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 TMEM41BQ5BJD5 291 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 OR2B11Q5JQS5 317 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 SOHLH1Q5JUK2 328 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 RBM48Q5RL73 367 aaKnown RBP2.49□□□□□ -2.01
LIMA1-206ENST00000550611 C1orf134Q5TEV5 83 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 Q5VSD8 79 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 LIPKQ5VXJ0 399 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 ZNF767PQ75MW2 155 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 TMEM17Q86X19 198 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 GDPD1Q8N9F7 314 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 OR10W1Q8NGF6 305 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 OR5H6Q8NGV6 325 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 OR4S2Q8NH73 311 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 UFD1Q92890 307 aa2.49□□□□□ -2.01
LIMA1-206ENST00000550611 FAM3DQ96BQ1 224 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms