RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 ATP1A1-AS1Q5TC04 95 aa13.01□□□□□ -0.33
RBFOX1-212ENST00000550418 TEX43Q6ZNM6 134 aa13.01□□□□□ -0.33
RBFOX1-212ENST00000550418 ZFHX2Q9C0A1 2572 aaPredicted RBP13.01□□□□□ -0.33
RBFOX1-212ENST00000550418 MYLKQ15746 1914 aa13□□□□□ -0.33
RBFOX1-212ENST00000550418 MMP23AO75900 390 aa13□□□□□ -0.33
RBFOX1-212ENST00000550418 SELLP14151 372 aa13□□□□□ -0.33
RBFOX1-212ENST00000550418 SUMO2P61956 95 aaKnown RBP13□□□□□ -0.33
RBFOX1-212ENST00000550418 C20orf204Q6ZNR8 217 aa13□□□□□ -0.33
RBFOX1-212ENST00000550418 DDB2Q92466 427 aa13□□□□□ -0.33
RBFOX1-212ENST00000550418 IGKV1-6A0A0C4DH72 117 aa13□□□□□ -0.33
RBFOX1-212ENST00000550418 E9PLN8 166 aa13□□□□□ -0.33
RBFOX1-212ENST00000550418 NCR2O95944 276 aa13□□□□□ -0.33
RBFOX1-212ENST00000550418 KLF17Q5JT82 389 aaPredicted RBP13□□□□□ -0.33
RBFOX1-212ENST00000550418 PPP1R27Q86WC6 154 aa13□□□□□ -0.33
RBFOX1-212ENST00000550418 CEACAM4O75871 244 aa13□□□□□ -0.33
RBFOX1-212ENST00000550418 FAM71F2Q6NXP2 309 aa13□□□□□ -0.33
RBFOX1-212ENST00000550418 ADAMTSL5Q6ZMM2 481 aa13□□□□□ -0.33
RBFOX1-212ENST00000550418 PCNTO95613 3336 aa12.99□□□□□ -0.33
RBFOX1-212ENST00000550418 CREBBPQ92793 2442 aa12.99□□□□□ -0.33
RBFOX1-212ENST00000550418 F2Z2F3 143 aa12.99□□□□□ -0.33
RBFOX1-212ENST00000550418 SMAD7O15105 426 aaKnown RBP12.99□□□□□ -0.33
RBFOX1-212ENST00000550418 FAM106AQ4KMX7 169 aa12.99□□□□□ -0.33
RBFOX1-212ENST00000550418 C10orf55Q5SWW7 151 aa12.99□□□□□ -0.33
RBFOX1-212ENST00000550418 Q6P435 159 aa12.99□□□□□ -0.33
RBFOX1-212ENST00000550418 DOCK7Q96N67 2140 aa12.99□□□□□ -0.33
RBFOX1-212ENST00000550418 IGHV4-39P01824 125 aa12.99□□□□□ -0.33
RBFOX1-212ENST00000550418 DYNLRB2Q8TF09 96 aa12.99□□□□□ -0.33
RBFOX1-212ENST00000550418 SHANK1Q9Y566 2161 aa12.99□□□□□ -0.33
RBFOX1-212ENST00000550418 FER1L5A0AVI2 2057 aa12.99□□□□□ -0.33
RBFOX1-212ENST00000550418 NPIPB5A8MRT5 1133 aa12.99□□□□□ -0.33
RBFOX1-212ENST00000550418 IGLL1P15814 213 aa12.99□□□□□ -0.33
RBFOX1-212ENST00000550418 FXYD7P58549 80 aa12.99□□□□□ -0.33
RBFOX1-212ENST00000550418 LHFPL4Q7Z7J7 247 aa12.99□□□□□ -0.33
RBFOX1-212ENST00000550418 GGNQ86UU5 652 aa12.99□□□□□ -0.33
RBFOX1-212ENST00000550418 EXOC3-AS1Q8N2X6 119 aa12.99□□□□□ -0.33
RBFOX1-212ENST00000550418 LINC00479Q96M42 142 aa12.99□□□□□ -0.33
RBFOX1-212ENST00000550418 RNASE1P07998 156 aaKnown RBP12.99□□□□□ -0.33
RBFOX1-212ENST00000550418 COA6Q5JTJ3 125 aaKnown RBP12.99□□□□□ -0.33
RBFOX1-212ENST00000550418 NCOR1P1Q9H4R4 102 aa12.99□□□□□ -0.33
RBFOX1-212ENST00000550418 WDR87Q6ZQQ6 2873 aa12.98□□□□□ -0.33
RBFOX1-212ENST00000550418 LOC105371242A0A075B767 164 aa12.98□□□□□ -0.33
RBFOX1-212ENST00000550418 PRR19A6NJB7 356 aa12.98□□□□□ -0.33
RBFOX1-212ENST00000550418 H7C1H1 209 aa12.98□□□□□ -0.33
RBFOX1-212ENST00000550418 IGKV1D-33P01593 117 aa12.98□□□□□ -0.33
RBFOX1-212ENST00000550418 IGKV1-33P01594 117 aa12.98□□□□□ -0.33
RBFOX1-212ENST00000550418 WIPF3A6NGB9 483 aa12.98□□□□□ -0.33
RBFOX1-212ENST00000550418 UBE2L6O14933 153 aa12.98□□□□□ -0.33
RBFOX1-212ENST00000550418 CFHR1Q03591 330 aa12.98□□□□□ -0.33
RBFOX1-212ENST00000550418 ZC2HC1BQ5TFG8 222 aa12.98□□□□□ -0.33
RBFOX1-212ENST00000550418 LYZL1Q6UWQ5 148 aa12.98□□□□□ -0.33
RBFOX1-212ENST00000550418 TRAV8-4A0A0B4J246 113 aa12.98□□□□□ -0.33
RBFOX1-212ENST00000550418 LINC00205P59089 165 aa12.98□□□□□ -0.33
RBFOX1-212ENST00000550418 CYYR1Q96J86 154 aa12.98□□□□□ -0.33
RBFOX1-212ENST00000550418 RPUSD1Q9UJJ7 312 aaKnown RBP12.98□□□□□ -0.33
RBFOX1-212ENST00000550418 PMS2P5A8MQ11 134 aa12.97□□□□□ -0.33
RBFOX1-212ENST00000550418 TMEM190Q8WZ59 177 aa12.97□□□□□ -0.33
RBFOX1-212ENST00000550418 DLX4Q92988 240 aaPredicted RBP12.97□□□□□ -0.33
RBFOX1-212ENST00000550418 SRRM5B3KS81 715 aa12.97□□□□□ -0.33
RBFOX1-212ENST00000550418 FOXL2NBQ6ZUU3 175 aa12.97□□□□□ -0.33
RBFOX1-212ENST00000550418 LSM4Q9Y4Z0 139 aaKnown RBP12.97□□□□□ -0.33
RBFOX1-212ENST00000550418 ANAPC1Q9H1A4 1944 aa12.97□□□□□ -0.33
RBFOX1-212ENST00000550418 CD300EQ496F6 205 aaPredicted RBP12.97□□□□□ -0.33
RBFOX1-212ENST00000550418 ARPC1AQ92747 370 aa12.97□□□□□ -0.33
RBFOX1-212ENST00000550418 KIR2DL5BA0A0G2JN68 375 aa12.97□□□□□ -0.33
RBFOX1-212ENST00000550418 KIR2DL5BA0A0G2JPC4 375 aa12.97□□□□□ -0.33
RBFOX1-212ENST00000550418 KIR2DL5AQ8N109 375 aa12.97□□□□□ -0.33
RBFOX1-212ENST00000550418 SLC50A1Q9BRV3 221 aa12.97□□□□□ -0.33
RBFOX1-212ENST00000550418 THADAQ6YHU6 1953 aa12.97□□□□□ -0.33
RBFOX1-212ENST00000550418 H3BRM9 83 aa12.96□□□□□ -0.33
RBFOX1-212ENST00000550418 SPINK8P0C7L1 97 aa12.96□□□□□ -0.33
RBFOX1-212ENST00000550418 LAGE3Q14657 143 aa12.96□□□□□ -0.33
RBFOX1-212ENST00000550418 DOCK10Q96BY6 2186 aa12.96□□□□□ -0.33
RBFOX1-212ENST00000550418 TRAV8-1A0A0A6YYK1 113 aa12.96□□□□□ -0.34
RBFOX1-212ENST00000550418 TRAV2A0A0B4J234 112 aa12.96□□□□□ -0.34
RBFOX1-212ENST00000550418 PSMB11A5LHX3 300 aa12.96□□□□□ -0.34
RBFOX1-212ENST00000550418 K7EP13 123 aa12.96□□□□□ -0.34
RBFOX1-212ENST00000550418 FAM27E3Q08E93 113 aa12.96□□□□□ -0.34
RBFOX1-212ENST00000550418 ZNF114Q8NC26 417 aa12.96□□□□□ -0.34
RBFOX1-212ENST00000550418 PRTN3P24158 256 aa12.96□□□□□ -0.34
RBFOX1-212ENST00000550418 ERG28Q9UKR5 140 aa12.96□□□□□ -0.34
RBFOX1-212ENST00000550418 IGHV2-26A0A0B4J1V2 119 aa12.95□□□□□ -0.34
RBFOX1-212ENST00000550418 IGKV3-20P01619 116 aa12.95□□□□□ -0.34
RBFOX1-212ENST00000550418 UNQ6494/PRO21346Q6UXR6 183 aa12.95□□□□□ -0.34
RBFOX1-212ENST00000550418 OR13C6PQ8NH95 151 aa12.95□□□□□ -0.34
RBFOX1-212ENST00000550418 CHAC1Q9BUX1 264 aa12.95□□□□□ -0.34
RBFOX1-212ENST00000550418 PKDREJQ9NTG1 2253 aa12.95□□□□□ -0.34
RBFOX1-212ENST00000550418 FNDC10F2Z333 226 aa12.95□□□□□ -0.34
RBFOX1-212ENST00000550418 HS3ST6Q96QI5 342 aa12.95□□□□□ -0.34
RBFOX1-212ENST00000550418 TNFRSF18Q9Y5U5 241 aa12.95□□□□□ -0.34
RBFOX1-212ENST00000550418 HEATR1Q9H583 2144 aaKnown RBP12.95□□□□□ -0.34
RBFOX1-212ENST00000550418 B9A039 149 aa12.95□□□□□ -0.34
RBFOX1-212ENST00000550418 PRB4P10163 310 aaPredicted RBP12.95□□□□□ -0.34
RBFOX1-212ENST00000550418 MYOD1P15172 320 aa12.95□□□□□ -0.34
RBFOX1-212ENST00000550418 SCRT1Q9BWW7 348 aa12.95□□□□□ -0.34
RBFOX1-212ENST00000550418 C9orf118A6NHY6 69 aa12.94□□□□□ -0.34
RBFOX1-212ENST00000550418 C17orf100A8MU93 164 aa12.94□□□□□ -0.34
RBFOX1-212ENST00000550418 TRGV9Q99603 122 aa12.94□□□□□ -0.34
RBFOX1-212ENST00000550418 SLC25A39Q9BZJ4 359 aaPredicted RBP12.94□□□□□ -0.34
RBFOX1-212ENST00000550418 V9GYV3 84 aa12.94□□□□□ -0.34
RBFOX1-212ENST00000550418 DNAH12Q6ZR08 3092 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms