RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 PPP1R27Q86WC6 154 aa8.33□□□□□ -1.08
SMARCC2-209ENST00000550164 LOC107984156A0A0G2JMH3 177 aa8.32□□□□□ -1.08
SMARCC2-209ENST00000550164 PMS2P5A8MQ11 134 aa8.32□□□□□ -1.08
SMARCC2-209ENST00000550164 SMIM13P0DJ93 91 aa8.32□□□□□ -1.08
SMARCC2-209ENST00000550164 ARL17AQ8IVW1 177 aa8.32□□□□□ -1.08
SMARCC2-209ENST00000550164 NEUROG1Q92886 237 aa8.32□□□□□ -1.08
SMARCC2-209ENST00000550164 C11orf52Q96A22 123 aa8.32□□□□□ -1.08
SMARCC2-209ENST00000550164 PLSCR4Q9NRQ2 329 aa8.32□□□□□ -1.08
SMARCC2-209ENST00000550164 MRPS16Q9Y3D3 137 aaKnown RBP8.32□□□□□ -1.08
SMARCC2-209ENST00000550164 SLC25A15Q9Y619 301 aa8.32□□□□□ -1.08
SMARCC2-209ENST00000550164 PSG1P11464 419 aa8.32□□□□□ -1.08
SMARCC2-209ENST00000550164 ZNF329Q86UD4 541 aa8.32□□□□□ -1.08
SMARCC2-209ENST00000550164 SPACA3Q8IXA5 215 aa8.32□□□□□ -1.08
SMARCC2-209ENST00000550164 FAM168AQ92567 244 aa8.32□□□□□ -1.08
SMARCC2-209ENST00000550164 FOXC1Q12948 553 aa8.32□□□□□ -1.08
SMARCC2-209ENST00000550164 SRSF6Q13247 344 aaKnown RBP8.32□□□□□ -1.08
SMARCC2-209ENST00000550164 VWC2Q2TAL6 325 aa8.32□□□□□ -1.08
SMARCC2-209ENST00000550164 MEGF9Q9H1U4 602 aa8.32□□□□□ -1.08
SMARCC2-209ENST00000550164 TDGF1P13385 188 aa8.31□□□□□ -1.08
SMARCC2-209ENST00000550164 RPS20P60866 119 aaKnown RBP8.31□□□□□ -1.08
SMARCC2-209ENST00000550164 PSG9Q00887 426 aa8.31□□□□□ -1.08
SMARCC2-209ENST00000550164 RABAC1Q9UI14 185 aa8.31□□□□□ -1.08
SMARCC2-209ENST00000550164 MUC22E2RYF6 1773 aaPredicted RBP8.31□□□□□ -1.08
SMARCC2-209ENST00000550164 IGHV3-66A0A0C4DH42 116 aa8.31□□□□□ -1.08
SMARCC2-209ENST00000550164 LYNX1G3V0Z9 82 aa8.31□□□□□ -1.08
SMARCC2-209ENST00000550164 H0YJW9 148 aa8.31□□□□□ -1.08
SMARCC2-209ENST00000550164 LYNX1P0DP58 116 aa8.31□□□□□ -1.08
SMARCC2-209ENST00000550164 SLC25A48Q6ZT89 311 aaKnown RBP8.31□□□□□ -1.08
SMARCC2-209ENST00000550164 OR5AN1Q8NGI8 311 aa8.31□□□□□ -1.08
SMARCC2-209ENST00000550164 C8orf46Q8TAG6 207 aa8.31□□□□□ -1.08
SMARCC2-209ENST00000550164 FOXC2Q99958 501 aa8.31□□□□□ -1.08
SMARCC2-209ENST00000550164 TRAV30A0A087WSZ9 112 aa8.31□□□□□ -1.08
SMARCC2-209ENST00000550164 H3BVH4 76 aa8.31□□□□□ -1.08
SMARCC2-209ENST00000550164 PPIFP30405 207 aaKnown RBP8.31□□□□□ -1.08
SMARCC2-209ENST00000550164 GAGE1Q13065 139 aa8.31□□□□□ -1.08
SMARCC2-209ENST00000550164 TMEM200BQ69YZ2 307 aa8.31□□□□□ -1.08
SMARCC2-209ENST00000550164 CCDC144NLQ6NUI1 221 aa8.31□□□□□ -1.08
SMARCC2-209ENST00000550164 FER1L6-AS1Q8NA97 138 aa8.31□□□□□ -1.08
SMARCC2-209ENST00000550164 TMEM167AQ8TBQ9 72 aa8.31□□□□□ -1.08
SMARCC2-209ENST00000550164 GAFA1Q96PS6 74 aa8.31□□□□□ -1.08
SMARCC2-209ENST00000550164 CD59P13987 128 aa8.31□□□□□ -1.08
SMARCC2-209ENST00000550164 Q6AWC8 147 aa8.31□□□□□ -1.08
SMARCC2-209ENST00000550164 OR2K2Q8NGT1 345 aa8.31□□□□□ -1.08
SMARCC2-209ENST00000550164 RNF125Q96EQ8 232 aa8.31□□□□□ -1.08
SMARCC2-209ENST00000550164 KMT2EQ8IZD2 1858 aa8.3□□□□□ -1.08
SMARCC2-209ENST00000550164 PLXNB1O43157 2135 aa8.3□□□□□ -1.08
SMARCC2-209ENST00000550164 A0A1B0GWJ7 208 aa8.3□□□□□ -1.08
SMARCC2-209ENST00000550164 FNDC10F2Z333 226 aa8.3□□□□□ -1.08
SMARCC2-209ENST00000550164 MMP23AO75900 390 aa8.3□□□□□ -1.08
SMARCC2-209ENST00000550164 PRR20EP86478 221 aa8.3□□□□□ -1.08
SMARCC2-209ENST00000550164 PRR20CP86479 221 aa8.3□□□□□ -1.08
SMARCC2-209ENST00000550164 PRR20DP86480 221 aa8.3□□□□□ -1.08
SMARCC2-209ENST00000550164 PRR20BP86481 221 aa8.3□□□□□ -1.08
SMARCC2-209ENST00000550164 PRR20AP86496 221 aa8.3□□□□□ -1.08
SMARCC2-209ENST00000550164 GUSBP1Q15486 140 aa8.3□□□□□ -1.08
SMARCC2-209ENST00000550164 TMEM133Q9H2Q1 129 aa8.3□□□□□ -1.08
SMARCC2-209ENST00000550164 WNT2P09544 360 aa8.3□□□□□ -1.08
SMARCC2-209ENST00000550164 PSMB2P49721 201 aa8.3□□□□□ -1.08
SMARCC2-209ENST00000550164 C11orf53Q8IXP5 236 aa8.3□□□□□ -1.08
SMARCC2-209ENST00000550164 C5orf30Q96GV9 206 aa8.3□□□□□ -1.08
SMARCC2-209ENST00000550164 D6R8Y8 96 aa8.3□□□□□ -1.08
SMARCC2-209ENST00000550164 NCR2O95944 276 aa8.3□□□□□ -1.08
SMARCC2-209ENST00000550164 HBDP02042 147 aa8.3□□□□□ -1.08
SMARCC2-209ENST00000550164 TMEM249Q2WGJ8 235 aa8.3□□□□□ -1.08
SMARCC2-209ENST00000550164 IFI27L1Q96BM0 104 aa8.3□□□□□ -1.08
SMARCC2-209ENST00000550164 MS4A6AQ9H2W1 248 aa8.3□□□□□ -1.08
SMARCC2-209ENST00000550164 LAMA2P24043 3122 aaKnown RBP8.29□□□□□ -1.08
SMARCC2-209ENST00000550164 A0A1B0GW15 77 aa8.29□□□□□ -1.08
SMARCC2-209ENST00000550164 SRRM4A7MD48 611 aaKnown RBP8.29□□□□□ -1.08
SMARCC2-209ENST00000550164 C16orf92Q96LL3 132 aa8.29□□□□□ -1.08
SMARCC2-209ENST00000550164 SLC25A39Q9BZJ4 359 aaPredicted RBP8.29□□□□□ -1.08
SMARCC2-209ENST00000550164 NUP210LQ5VU65 1888 aa8.29□□□□□ -1.08
SMARCC2-209ENST00000550164 ZFHX2Q9C0A1 2572 aaPredicted RBP8.29□□□□□ -1.08
SMARCC2-209ENST00000550164 SMIM27A0A1W2PRY6 76 aa8.29□□□□□ -1.08
SMARCC2-209ENST00000550164 NPIPB5A8MRT5 1133 aa8.29□□□□□ -1.08
SMARCC2-209ENST00000550164 M0R3E3 92 aa8.29□□□□□ -1.08
SMARCC2-209ENST00000550164 C17orf58Q2M2W7 97 aa8.29□□□□□ -1.08
SMARCC2-209ENST00000550164 NHP2Q9NX24 153 aaKnown RBP8.29□□□□□ -1.08
SMARCC2-209ENST00000550164 C21orf62Q9NYP8 219 aa8.29□□□□□ -1.08
SMARCC2-209ENST00000550164 JKAMPQ9P055 326 aa8.29□□□□□ -1.08
SMARCC2-209ENST00000550164 LSM4Q9Y4Z0 139 aaKnown RBP8.29□□□□□ -1.08
SMARCC2-209ENST00000550164 KLF17Q5JT82 389 aaPredicted RBP8.29□□□□□ -1.08
SMARCC2-209ENST00000550164 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.29□□□□□ -1.08
SMARCC2-209ENST00000550164 SLC25A2Q9BXI2 301 aa8.29□□□□□ -1.08
SMARCC2-209ENST00000550164 PRRC2CQ9Y520 2896 aaKnown RBP8.29□□□□□ -1.08
SMARCC2-209ENST00000550164 A0A1W2PPI3 338 aa8.28□□□□□ -1.08
SMARCC2-209ENST00000550164 GAGE12BA1L429 117 aa8.28□□□□□ -1.08
SMARCC2-209ENST00000550164 CDX4O14627 284 aaPredicted RBP8.28□□□□□ -1.08
SMARCC2-209ENST00000550164 LEPP41159 167 aa8.28□□□□□ -1.08
SMARCC2-209ENST00000550164 SEC11AP67812 179 aa8.28□□□□□ -1.08
SMARCC2-209ENST00000550164 LYRM7Q5U5X0 104 aa8.28□□□□□ -1.08
SMARCC2-209ENST00000550164 DPM3Q9P2X0 92 aa8.28□□□□□ -1.08
SMARCC2-209ENST00000550164 ARMS2P0C7Q2 107 aa8.28□□□□□ -1.08
SMARCC2-209ENST00000550164 EVI2AP22794 236 aa8.28□□□□□ -1.08
SMARCC2-209ENST00000550164 LOXL3P58215 753 aa8.28□□□□□ -1.08
SMARCC2-209ENST00000550164 HERVK_113P61574 105 aa8.28□□□□□ -1.08
SMARCC2-209ENST00000550164 LINC01560Q8TB33 94 aa8.28□□□□□ -1.08
SMARCC2-209ENST00000550164 HTTP42858 3142 aa8.28□□□□□ -1.08
SMARCC2-209ENST00000550164 TRGV9Q99603 122 aa8.28□□□□□ -1.08
SMARCC2-209ENST00000550164 OR11H12B2RN74 326 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms