RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 LGALS9CQ6DKI2 356 aa11.82□□□□□ -0.52
VPS29-207ENST00000549970 OR8I2Q8N0Y5 310 aa11.82□□□□□ -0.52
VPS29-207ENST00000549970 RPP25LQ8N5L8 163 aaKnown RBP11.82□□□□□ -0.52
VPS29-207ENST00000549970 C1QTNF4Q9BXJ3 329 aa11.82□□□□□ -0.52
VPS29-207ENST00000549970 HRH4Q9H3N8 390 aa11.82□□□□□ -0.52
VPS29-207ENST00000549970 HLA-DRB4X5D2U9 266 aa11.82□□□□□ -0.52
VPS29-207ENST00000549970 IGKV3-20P01619 116 aa11.81□□□□□ -0.52
VPS29-207ENST00000549970 HLA-DMBP28068 263 aa11.81□□□□□ -0.52
VPS29-207ENST00000549970 POLR2GP62487 172 aaKnown RBP eCLIP11.81□□□□□ -0.52
VPS29-207ENST00000549970 AKR1C1Q04828 323 aa11.81□□□□□ -0.52
VPS29-207ENST00000549970 COQ8AQ8NI60 647 aa11.81□□□□□ -0.52
VPS29-207ENST00000549970 SDHCQ99643 169 aaPredicted RBP11.81□□□□□ -0.52
VPS29-207ENST00000549970 STRAPQ9Y3F4 350 aaKnown RBP11.81□□□□□ -0.52
VPS29-207ENST00000549970 IGLL5B9A064 214 aa11.8□□□□□ -0.52
VPS29-207ENST00000549970 C11orf94C9JXX5 98 aa11.8□□□□□ -0.52
VPS29-207ENST00000549970 SOCS3O14543 225 aa11.8□□□□□ -0.52
VPS29-207ENST00000549970 GATA2P23769 480 aaPredicted RBP11.8□□□□□ -0.52
VPS29-207ENST00000549970 PSMB3P49720 205 aa11.8□□□□□ -0.52
VPS29-207ENST00000549970 FXYD7P58549 80 aa11.8□□□□□ -0.52
VPS29-207ENST00000549970 Q6ZTC4 211 aa11.8□□□□□ -0.52
VPS29-207ENST00000549970 ACOT7LQ6ZUV0 252 aa11.8□□□□□ -0.52
VPS29-207ENST00000549970 SLC25A22Q9H936 323 aa11.8□□□□□ -0.52
VPS29-207ENST00000549970 SMCO3A2RU48 225 aa11.79□□□□□ -0.52
VPS29-207ENST00000549970 SSSCA1O60232 199 aa11.79□□□□□ -0.52
VPS29-207ENST00000549970 CFDP00746 253 aaPredicted RBP11.79□□□□□ -0.52
VPS29-207ENST00000549970 IFNA21P01568 189 aa11.79□□□□□ -0.52
VPS29-207ENST00000549970 OR4E1P0C645 316 aa11.79□□□□□ -0.52
VPS29-207ENST00000549970 ANXA7P20073 488 aaKnown RBP11.79□□□□□ -0.52
VPS29-207ENST00000549970 ID3Q02535 119 aa11.79□□□□□ -0.52
VPS29-207ENST00000549970 C4orf46Q504U0 113 aa11.79□□□□□ -0.52
VPS29-207ENST00000549970 TMEM182Q6ZP80 229 aaPredicted RBP11.79□□□□□ -0.52
VPS29-207ENST00000549970 FOXI2Q6ZQN5 318 aa11.79□□□□□ -0.52
VPS29-207ENST00000549970 BPIFCQ8NFQ6 507 aa11.79□□□□□ -0.52
VPS29-207ENST00000549970 SAV1Q9H4B6 383 aaPredicted RBP11.79□□□□□ -0.52
VPS29-207ENST00000549970 PSENENQ9NZ42 101 aa11.79□□□□□ -0.52
VPS29-207ENST00000549970 CELA1Q9UNI1 258 aa11.79□□□□□ -0.52
VPS29-207ENST00000549970 CENPXA8MT69 81 aa11.78□□□□□ -0.52
VPS29-207ENST00000549970 ORM2P19652 201 aa11.78□□□□□ -0.52
VPS29-207ENST00000549970 BTCP35070 178 aa11.78□□□□□ -0.52
VPS29-207ENST00000549970 GALR1P47211 349 aa11.78□□□□□ -0.52
VPS29-207ENST00000549970 OR4B1Q8NGF8 309 aa11.78□□□□□ -0.52
VPS29-207ENST00000549970 OR4D5Q8NGN0 318 aa11.78□□□□□ -0.52
VPS29-207ENST00000549970 OR1B1Q8NGR6 318 aa11.78□□□□□ -0.52
VPS29-207ENST00000549970 SLC25A32Q9H2D1 315 aa11.78□□□□□ -0.52
VPS29-207ENST00000549970 TRAV10A0A0B4J240 114 aa11.77□□□□□ -0.53
VPS29-207ENST00000549970 ZNF98A6NK75 572 aa11.77□□□□□ -0.53
VPS29-207ENST00000549970 F6UB75 175 aa11.77□□□□□ -0.53
VPS29-207ENST00000549970 ISLRO14498 428 aa11.77□□□□□ -0.53
VPS29-207ENST00000549970 SCGB1D2O95969 90 aa11.77□□□□□ -0.53
VPS29-207ENST00000549970 IL7P13232 177 aa11.77□□□□□ -0.53
VPS29-207ENST00000549970 TCTAP57738 103 aa11.77□□□□□ -0.53
VPS29-207ENST00000549970 ZNF767PQ75MW2 155 aa11.77□□□□□ -0.53
VPS29-207ENST00000549970 C16orf92Q96LL3 132 aa11.77□□□□□ -0.53
VPS29-207ENST00000549970 TMEM147Q9BVK8 224 aa11.77□□□□□ -0.53
VPS29-207ENST00000549970 APLNQ9ULZ1 77 aa11.77□□□□□ -0.53
VPS29-207ENST00000549970 SLC45A2Q9UMX9 530 aa11.77□□□□□ -0.53
VPS29-207ENST00000549970 IGHV3OR16-12A0A075B7B8 117 aa11.76□□□□□ -0.53
VPS29-207ENST00000549970 EBLN2Q6P2I7 272 aa11.76□□□□□ -0.53
VPS29-207ENST00000549970 TMEM144Q7Z5S9 345 aa11.76□□□□□ -0.53
VPS29-207ENST00000549970 C20orf173Q96LM9 149 aa11.76□□□□□ -0.53
VPS29-207ENST00000549970 C7orf50Q9BRJ6 194 aaKnown RBP11.76□□□□□ -0.53
VPS29-207ENST00000549970 RSG1Q9BU20 258 aa11.76□□□□□ -0.53
VPS29-207ENST00000549970 DOK5Q9P104 306 aa11.76□□□□□ -0.53
VPS29-207ENST00000549970 PMS2P5A8MQ11 134 aa11.75□□□□□ -0.53
VPS29-207ENST00000549970 CCNKO75909 580 aa11.75□□□□□ -0.53
VPS29-207ENST00000549970 IL5P05113 134 aa11.75□□□□□ -0.53
VPS29-207ENST00000549970 MEOX2P50222 304 aa11.75□□□□□ -0.53
VPS29-207ENST00000549970 RRAS2P62070 204 aaPredicted RBP11.75□□□□□ -0.53
VPS29-207ENST00000549970 C12orf74Q32Q52 190 aa11.75□□□□□ -0.53
VPS29-207ENST00000549970 FAM78BQ5VT40 261 aa11.75□□□□□ -0.53
VPS29-207ENST00000549970 SAMD13Q5VXD3 122 aa11.75□□□□□ -0.53
VPS29-207ENST00000549970 ZNF705AQ6ZN79 300 aaPredicted RBP11.75□□□□□ -0.53
VPS29-207ENST00000549970 CYP2G1PQ6ZSU1 146 aa11.75□□□□□ -0.53
VPS29-207ENST00000549970 ZNF709Q8N972 641 aa11.75□□□□□ -0.53
VPS29-207ENST00000549970 SMIM8Q96KF7 97 aa11.75□□□□□ -0.53
VPS29-207ENST00000549970 SCRT1Q9BWW7 348 aa11.75□□□□□ -0.53
VPS29-207ENST00000549970 SLC35B3Q9H1N7 401 aa11.75□□□□□ -0.53
VPS29-207ENST00000549970 RPRMQ9NS64 109 aa11.75□□□□□ -0.53
VPS29-207ENST00000549970 METTL15P1P0C7V9 234 aa11.74□□□□□ -0.53
VPS29-207ENST00000549970 S100A7P31151 101 aa11.74□□□□□ -0.53
VPS29-207ENST00000549970 EMP1P54849 157 aa11.74□□□□□ -0.53
VPS29-207ENST00000549970 PAX9P55771 341 aa11.74□□□□□ -0.53
VPS29-207ENST00000549970 PRR20EP86478 221 aa11.74□□□□□ -0.53
VPS29-207ENST00000549970 PRR20CP86479 221 aa11.74□□□□□ -0.53
VPS29-207ENST00000549970 PRR20DP86480 221 aa11.74□□□□□ -0.53
VPS29-207ENST00000549970 PRR20BP86481 221 aa11.74□□□□□ -0.53
VPS29-207ENST00000549970 PRR20AP86496 221 aa11.74□□□□□ -0.53
VPS29-207ENST00000549970 IAH1Q2TAA2 248 aaPredicted RBP11.74□□□□□ -0.53
VPS29-207ENST00000549970 SPATA31B1PQ5VZV4 182 aa11.74□□□□□ -0.53
VPS29-207ENST00000549970 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.74□□□□□ -0.53
VPS29-207ENST00000549970 C17orf77Q96MU5 243 aa11.74□□□□□ -0.53
VPS29-207ENST00000549970 GSKIPQ9P0R6 139 aa11.74□□□□□ -0.53
VPS29-207ENST00000549970 IGHV4-4A0A075B6R2 117 aa11.73□□□□□ -0.53
VPS29-207ENST00000549970 A0A0J9YX75 114 aa11.73□□□□□ -0.53
VPS29-207ENST00000549970 ZNF705FA8MVS1 300 aaPredicted RBP11.73□□□□□ -0.53
VPS29-207ENST00000549970 H3BRN7 92 aa11.73□□□□□ -0.53
VPS29-207ENST00000549970 LINC00869P0C866 280 aa11.73□□□□□ -0.53
VPS29-207ENST00000549970 ZNF705DP0CH99 300 aaPredicted RBP11.73□□□□□ -0.53
VPS29-207ENST00000549970 ZNF705BP0CI00 300 aaPredicted RBP11.73□□□□□ -0.53
VPS29-207ENST00000549970 RAP2BP61225 183 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms