RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 SLC35B3Q9H1N7 401 aa3.69□□□□□ -1.82
SCAF11-212ENST00000549162 CACNG5Q9UF02 275 aa3.69□□□□□ -1.82
SCAF11-212ENST00000549162 TRBV19A0A075B6N1 114 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 A0A1B0GVG6 124 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 IGKV1-16P04430 117 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 HIST1H1EP10412 219 aaKnown RBP3.68□□□□□ -1.82
SCAF11-212ENST00000549162 AKR1D1P51857 326 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 CCL20P78556 96 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 IBA57Q5T440 356 aaKnown RBP3.68□□□□□ -1.82
SCAF11-212ENST00000549162 FAM210BQ96KR6 192 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 PLEKHA3Q9HB20 300 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 FAM74A7A6NL05 159 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 DNASE2O00115 360 aaPredicted RBP3.68□□□□□ -1.82
SCAF11-212ENST00000549162 NDUFB4O95168 129 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 NDPQ00604 133 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 SOHLH1Q5JUK2 328 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 OR10P1Q8NGE3 313 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 ZNF479Q96JC4 524 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 C5orf42Q9H799 3197 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 TRBV6-5A0A0K0K1A5 114 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 KANTRA0A1W2PQU2 76 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 SMIM9A6NGZ8 99 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 K7EP13 123 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 CA2P00918 260 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 IGLC6P0CF74 106 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 BCL2P10415 239 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 RPS20P60866 119 aaKnown RBP3.68□□□□□ -1.82
SCAF11-212ENST00000549162 RHOBP62745 196 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 AMTNQ6UX39 209 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 SLC7A5P1Q8MH63 180 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 SPATA3Q8NHX4 192 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 TMPRSS5Q9H3S3 457 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 KCNS2Q9ULS6 477 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 SMAD5-AS1Q9Y6J3 95 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 AKAP13Q12802 2813 aa3.68□□□□□ -1.82
SCAF11-212ENST00000549162 TRAV41A0A0B4J266 112 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 LOC100131303A0A0U1RQF7 123 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 K7EQG2 157 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 IGLV1-51P01701 117 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 TAS2R45P59539 299 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 RPL39P5Q59GN2 51 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 FFAR4Q5NUL3 377 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 ZNF329Q86UD4 541 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 C15orf54Q8N8G6 183 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 OR2T35Q8NGX2 323 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 TMEM158Q8WZ71 300 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 TMEM18Q96B42 140 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 RCHY1Q96PM5 261 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 ACTR3CQ9C0K3 210 aaPredicted RBP3.67□□□□□ -1.82
SCAF11-212ENST00000549162 PIEZO1Q92508 2521 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 CFAP46Q8IYW2 2715 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 SPTBP11277 2137 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 DNAH2Q9P225 4427 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 TEX48A0A1B0GUV7 120 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 ZNF705EA8MWA4 302 aaPredicted RBP3.67□□□□□ -1.82
SCAF11-212ENST00000549162 M0R1X1 148 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 OVOL1O14753 267 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 GAGE2BQ13066 116 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 LINC01620Q4KN68 170 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 GAGE2EQ4V326 116 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 GAGE2AQ6NT46 116 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 LCN15Q6UWW0 184 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 TMEM183AQ8IXX5 376 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 INO80EQ8NBZ0 244 aaPredicted RBP3.67□□□□□ -1.82
SCAF11-212ENST00000549162 GAGE2DQ9UEU5 116 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 TRAV8-2A0A0B4J237 113 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 TCAPO15273 167 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 SIX6O95475 246 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 PGAM2P15259 253 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 CCL3L1P16619 93 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 CX3CL1P78423 397 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 TMEM256Q8N2U0 113 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 RPP25LQ8N5L8 163 aaKnown RBP3.67□□□□□ -1.82
SCAF11-212ENST00000549162 C9orf85Q96MD7 179 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 LINC01600Q96MT4 127 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 OR51M1Q9H341 326 aa3.67□□□□□ -1.82
SCAF11-212ENST00000549162 IGHV4OR15-8A0A075B7B6 117 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 A0A087WW49 117 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 IGHV7-4-1A0A0J9YVY3 117 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 IGKV1D-33P01593 117 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 IGKV1-33P01594 117 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 OR5AL1P0C617 328 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 INPP1P49441 399 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 TCTAP57738 103 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 CCL8P80075 99 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 HIST1H1AQ02539 215 aaPredicted RBP3.66□□□□□ -1.82
SCAF11-212ENST00000549162 RNASEKQ6P5S7 137 aaKnown RBP3.66□□□□□ -1.82
SCAF11-212ENST00000549162 ZFP2Q6ZN57 461 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 TCTEX1D2Q8WW35 142 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 UBTD1Q9HAC8 227 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 SDF2L1Q9HCN8 221 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 LINC01619G3V211 115 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 H7C423 109 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 BMPR1BO00238 502 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 AGPAT2O15120 278 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 MT-CO2P00403 227 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 CSNK1G2-AS1Q8NCQ2 148 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 ISOC2Q96AB3 205 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 RPEQ96AT9 228 aa3.66□□□□□ -1.82
SCAF11-212ENST00000549162 TSSC4Q9Y5U2 329 aaPredicted RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms