RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 RND2P52198 227 aa9.25□□□□□ -0.93
PTCH1-218ENST00000548945 SUPT4H1P63272 117 aaKnown RBP9.25□□□□□ -0.93
PTCH1-218ENST00000548945 NOXA1Q86UR1 476 aa9.25□□□□□ -0.93
PTCH1-218ENST00000548945 POM121L12Q8N7R1 296 aa9.25□□□□□ -0.93
PTCH1-218ENST00000548945 COQ8AQ8NI60 647 aa9.25□□□□□ -0.93
PTCH1-218ENST00000548945 MITD1Q8WV92 249 aa9.25□□□□□ -0.93
PTCH1-218ENST00000548945 RBPMSQ93062 196 aaKnown RBP9.25□□□□□ -0.93
PTCH1-218ENST00000548945 PPP1R14BQ96C90 147 aa9.25□□□□□ -0.93
PTCH1-218ENST00000548945 NEU1Q99519 415 aa9.25□□□□□ -0.93
PTCH1-218ENST00000548945 NDUFAF3Q9BU61 184 aa9.25□□□□□ -0.93
PTCH1-218ENST00000548945 HEYLQ9NQ87 328 aaPredicted RBP9.25□□□□□ -0.93
PTCH1-218ENST00000548945 SHPKQ9UHJ6 478 aa9.25□□□□□ -0.93
PTCH1-218ENST00000548945 CELA1Q9UNI1 258 aa9.25□□□□□ -0.93
PTCH1-218ENST00000548945 KCNIP3Q9Y2W7 256 aa9.25□□□□□ -0.93
PTCH1-218ENST00000548945 H3BMM0 161 aa9.24□□□□□ -0.93
PTCH1-218ENST00000548945 CCNKO75909 580 aa9.24□□□□□ -0.93
PTCH1-218ENST00000548945 SULT1A3P0DMM9 295 aa9.24□□□□□ -0.93
PTCH1-218ENST00000548945 SULT1A4P0DMN0 295 aa9.24□□□□□ -0.93
PTCH1-218ENST00000548945 NUP62P37198 522 aaPredicted RBP9.24□□□□□ -0.93
PTCH1-218ENST00000548945 FCN2Q15485 313 aa9.24□□□□□ -0.93
PTCH1-218ENST00000548945 SLC24A4Q8NFF2 622 aa9.24□□□□□ -0.93
PTCH1-218ENST00000548945 GLYATL2Q8WU03 294 aa9.24□□□□□ -0.93
PTCH1-218ENST00000548945 PKD1P98161 4303 aa9.24□□□□□ -0.93
PTCH1-218ENST00000548945 TMEM189A5PLL7 270 aa9.23□□□□□ -0.93
PTCH1-218ENST00000548945 SMIM9A6NGZ8 99 aa9.23□□□□□ -0.93
PTCH1-218ENST00000548945 BUB3O43684 328 aa9.23□□□□□ -0.93
PTCH1-218ENST00000548945 TOMM40O96008 361 aa9.23□□□□□ -0.93
PTCH1-218ENST00000548945 IL4P05112 153 aa9.23□□□□□ -0.93
PTCH1-218ENST00000548945 OR5AC1P0C628 307 aa9.23□□□□□ -0.93
PTCH1-218ENST00000548945 HLA-DRB4P13762 266 aa9.23□□□□□ -0.93
PTCH1-218ENST00000548945 NKX2-1P43699 371 aaPredicted RBP9.23□□□□□ -0.93
PTCH1-218ENST00000548945 SRPXP78539 464 aa9.23□□□□□ -0.93
PTCH1-218ENST00000548945 USF2Q15853 346 aaPredicted RBP9.23□□□□□ -0.93
PTCH1-218ENST00000548945 SIGLEC15Q6ZMC9 328 aa9.23□□□□□ -0.93
PTCH1-218ENST00000548945 ZNF705AQ6ZN79 300 aaPredicted RBP9.23□□□□□ -0.93
PTCH1-218ENST00000548945 OR11H7Q8NGC8 314 aa9.23□□□□□ -0.93
PTCH1-218ENST00000548945 FAM210BQ96KR6 192 aa9.23□□□□□ -0.93
PTCH1-218ENST00000548945 XCL2Q9UBD3 114 aa9.23□□□□□ -0.93
PTCH1-218ENST00000548945 MGAT4CQ9UBM8 478 aa9.23□□□□□ -0.93
PTCH1-218ENST00000548945 CACNG5Q9UF02 275 aa9.23□□□□□ -0.93
PTCH1-218ENST00000548945 HLA-DRB4X5D2U9 266 aa9.23□□□□□ -0.93
PTCH1-218ENST00000548945 PIGBOS1A0A0B4J2F0 54 aa9.22□□□□□ -0.93
PTCH1-218ENST00000548945 CEBPZOSA8MTT3 80 aa9.22□□□□□ -0.93
PTCH1-218ENST00000548945 ZNF705FA8MVS1 300 aaPredicted RBP9.22□□□□□ -0.93
PTCH1-218ENST00000548945 ZNF705DP0CH99 300 aaPredicted RBP9.22□□□□□ -0.93
PTCH1-218ENST00000548945 ZNF705BP0CI00 300 aaPredicted RBP9.22□□□□□ -0.93
PTCH1-218ENST00000548945 RD3LP0DJH9 198 aa9.22□□□□□ -0.93
PTCH1-218ENST00000548945 MED14OSP0DP75 135 aa9.22□□□□□ -0.93
PTCH1-218ENST00000548945 LGALS9BQ3B8N2 356 aa9.22□□□□□ -0.93
PTCH1-218ENST00000548945 SELENOHQ8IZQ5 122 aaKnown RBP9.22□□□□□ -0.93
PTCH1-218ENST00000548945 LHFPL5Q8TAF8 219 aa9.22□□□□□ -0.93
PTCH1-218ENST00000548945 TMEM170AQ8WVE7 144 aa9.22□□□□□ -0.93
PTCH1-218ENST00000548945 ASB13Q8WXK3 278 aa9.22□□□□□ -0.93
PTCH1-218ENST00000548945 CLUHP3Q96NS8 147 aa9.22□□□□□ -0.93
PTCH1-218ENST00000548945 PFDN2Q9UHV9 154 aa9.22□□□□□ -0.93
PTCH1-218ENST00000548945 TEX48A0A1B0GUV7 120 aa9.21□□□□□ -0.94
PTCH1-218ENST00000548945 GOSR2O14653 212 aa9.21□□□□□ -0.94
PTCH1-218ENST00000548945 SPART-AS1P0CW21 52 aa9.21□□□□□ -0.94
PTCH1-218ENST00000548945 CXCL3P19876 107 aa9.21□□□□□ -0.94
PTCH1-218ENST00000548945 NMSQ5H8A3 153 aa9.21□□□□□ -0.94
PTCH1-218ENST00000548945 LGI3Q8N145 548 aa9.21□□□□□ -0.94
PTCH1-218ENST00000548945 LRTM2Q8N967 370 aa9.21□□□□□ -0.94
PTCH1-218ENST00000548945 NPIPB3Q92617 1050 aa9.21□□□□□ -0.94
PTCH1-218ENST00000548945 IL22RA2Q969J5 263 aa9.21□□□□□ -0.94
PTCH1-218ENST00000548945 GPR146Q96CH1 333 aa9.21□□□□□ -0.94
PTCH1-218ENST00000548945 ST6GAL2Q96JF0 529 aa9.21□□□□□ -0.94
PTCH1-218ENST00000548945 TMEM56-RWDD3S4R434 201 aa9.21□□□□□ -0.94
PTCH1-218ENST00000548945 U3KQ87 197 aa9.21□□□□□ -0.94
PTCH1-218ENST00000548945 RTL8CO15255 209 aa9.2□□□□□ -0.94
PTCH1-218ENST00000548945 NXPH3O95157 252 aa9.2□□□□□ -0.94
PTCH1-218ENST00000548945 GIPP09681 153 aaPredicted RBP9.2□□□□□ -0.94
PTCH1-218ENST00000548945 PSG1P11464 419 aa9.2□□□□□ -0.94
PTCH1-218ENST00000548945 ATP5IP56385 69 aaPredicted RBP9.2□□□□□ -0.94
PTCH1-218ENST00000548945 TMEM268Q5VZI3 342 aa9.2□□□□□ -0.94
PTCH1-218ENST00000548945 SPATA31B1PQ5VZV4 182 aa9.2□□□□□ -0.94
PTCH1-218ENST00000548945 OR8G2PQ6IF36 304 aa9.2□□□□□ -0.94
PTCH1-218ENST00000548945 ZNF767PQ75MW2 155 aa9.2□□□□□ -0.94
PTCH1-218ENST00000548945 TCTE3Q8IZS6 198 aa9.2□□□□□ -0.94
PTCH1-218ENST00000548945 OR51G1Q8NGK1 321 aa9.2□□□□□ -0.94
PTCH1-218ENST00000548945 ACY3Q96HD9 319 aa9.2□□□□□ -0.94
PTCH1-218ENST00000548945 DUXBA0A1W2PPF3 345 aa9.19□□□□□ -0.94
PTCH1-218ENST00000548945 PRSS29PA6NIE9 313 aa9.19□□□□□ -0.94
PTCH1-218ENST00000548945 ID1P41134 155 aa9.19□□□□□ -0.94
PTCH1-218ENST00000548945 RAP2BP61225 183 aa9.19□□□□□ -0.94
PTCH1-218ENST00000548945 C1orf194Q5T5A4 169 aa9.19□□□□□ -0.94
PTCH1-218ENST00000548945 FOXI2Q6ZQN5 318 aa9.19□□□□□ -0.94
PTCH1-218ENST00000548945 RNF125Q96EQ8 232 aa9.19□□□□□ -0.94
PTCH1-218ENST00000548945 PRR13Q9NZ81 148 aa9.19□□□□□ -0.94
PTCH1-218ENST00000548945 NACAE9PAV3 2078 aa9.19□□□□□ -0.94
PTCH1-218ENST00000548945 DNAH11Q96DT5 4516 aa9.18□□□□□ -0.94
PTCH1-218ENST00000548945 IFNA10P01566 189 aa9.18□□□□□ -0.94
PTCH1-218ENST00000548945 IFNA21P01568 189 aa9.18□□□□□ -0.94
PTCH1-218ENST00000548945 PSMB3P49720 205 aa9.18□□□□□ -0.94
PTCH1-218ENST00000548945 H2BFSP57053 126 aa9.18□□□□□ -0.94
PTCH1-218ENST00000548945 CD300CQ08708 224 aa9.18□□□□□ -0.94
PTCH1-218ENST00000548945 GSG1LQ6UXU4 331 aa9.18□□□□□ -0.94
PTCH1-218ENST00000548945 SAV1Q9H4B6 383 aaPredicted RBP9.18□□□□□ -0.94
PTCH1-218ENST00000548945 DKK2Q9UBU2 259 aa9.18□□□□□ -0.94
PTCH1-218ENST00000548945 HSPB7Q9UBY9 170 aa9.18□□□□□ -0.94
PTCH1-218ENST00000548945 TMED3Q9Y3Q3 217 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms