RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 VMA21Q3ZAQ7 101 aa11.31□□□□□ -0.6
RAPGEF3-218ENST00000548919 PIP4P1Q86T03 277 aa11.31□□□□□ -0.6
RAPGEF3-218ENST00000548919 TMEM70Q9BUB7 260 aa11.31□□□□□ -0.6
RAPGEF3-218ENST00000548919 hDV102S1A0JD36 115 aa11.3□□□□□ -0.6
RAPGEF3-218ENST00000548919 TMEM178BH3BS89 294 aa11.3□□□□□ -0.6
RAPGEF3-218ENST00000548919 RELQ04864 619 aaPredicted RBP11.3□□□□□ -0.6
RAPGEF3-218ENST00000548919 BSPH1Q075Z2 132 aa11.3□□□□□ -0.6
RAPGEF3-218ENST00000548919 TMEM108Q6UXF1 575 aa11.3□□□□□ -0.6
RAPGEF3-218ENST00000548919 ERASQ7Z444 233 aa11.3□□□□□ -0.6
RAPGEF3-218ENST00000548919 PRSS22Q9GZN4 317 aa11.3□□□□□ -0.6
RAPGEF3-218ENST00000548919 MALRD1Q5VYJ5 2156 aa11.3□□□□□ -0.6
RAPGEF3-218ENST00000548919 OR4C46A6NHA9 309 aa11.3□□□□□ -0.6
RAPGEF3-218ENST00000548919 NDUFB3O43676 98 aa11.3□□□□□ -0.6
RAPGEF3-218ENST00000548919 LTAP01374 205 aa11.3□□□□□ -0.6
RAPGEF3-218ENST00000548919 TCRAP04437 139 aa11.3□□□□□ -0.6
RAPGEF3-218ENST00000548919 CIARTQ8N365 385 aaPredicted RBP11.3□□□□□ -0.6
RAPGEF3-218ENST00000548919 NUP37Q8NFH4 326 aa11.3□□□□□ -0.6
RAPGEF3-218ENST00000548919 POLEQ07864 2286 aa11.29□□□□□ -0.6
RAPGEF3-218ENST00000548919 A8MWL6 223 aa11.29□□□□□ -0.6
RAPGEF3-218ENST00000548919 H0Y8G0 127 aa11.29□□□□□ -0.6
RAPGEF3-218ENST00000548919 TOMM40O96008 361 aa11.29□□□□□ -0.6
RAPGEF3-218ENST00000548919 CA7P43166 264 aa11.29□□□□□ -0.6
RAPGEF3-218ENST00000548919 STXBP6Q8NFX7 210 aa11.29□□□□□ -0.6
RAPGEF3-218ENST00000548919 ORAOV1Q8WV07 137 aa11.29□□□□□ -0.6
RAPGEF3-218ENST00000548919 TIMM8BQ9Y5J9 83 aaPredicted RBP11.29□□□□□ -0.6
RAPGEF3-218ENST00000548919 C19orf71A6NCJ1 209 aa11.29□□□□□ -0.6
RAPGEF3-218ENST00000548919 CRYGCP07315 174 aa11.29□□□□□ -0.6
RAPGEF3-218ENST00000548919 LOXP28300 417 aaPredicted RBP11.29□□□□□ -0.6
RAPGEF3-218ENST00000548919 CEACAM8P31997 349 aaPredicted RBP11.29□□□□□ -0.6
RAPGEF3-218ENST00000548919 LRRC10Q5BKY1 277 aa11.29□□□□□ -0.6
RAPGEF3-218ENST00000548919 EXOC3-AS1Q8N2X6 119 aa11.29□□□□□ -0.6
RAPGEF3-218ENST00000548919 C5orf17Q8NAS9 161 aa11.29□□□□□ -0.6
RAPGEF3-218ENST00000548919 SH3BGRL2Q9UJC5 107 aa11.29□□□□□ -0.6
RAPGEF3-218ENST00000548919 COX11Q9Y6N1 276 aa11.29□□□□□ -0.6
RAPGEF3-218ENST00000548919 DAZAP1Q96EP5 407 aaKnown RBP11.28□□□□□ -0.6
RAPGEF3-218ENST00000548919 FMC1Q96HJ9 113 aa11.28□□□□□ -0.6
RAPGEF3-218ENST00000548919 TRGV9Q99603 122 aa11.28□□□□□ -0.6
RAPGEF3-218ENST00000548919 LYZP61626 148 aa11.28□□□□□ -0.6
RAPGEF3-218ENST00000548919 MUC15Q8N387 334 aa11.28□□□□□ -0.6
RAPGEF3-218ENST00000548919 PRSS33Q8NF86 280 aa11.28□□□□□ -0.6
RAPGEF3-218ENST00000548919 CBY1Q9Y3M2 126 aa11.28□□□□□ -0.6
RAPGEF3-218ENST00000548919 SYS1-DBNDD2H3BUS1 97 aa11.27□□□□□ -0.61
RAPGEF3-218ENST00000548919 IGHV1-8P0DP01 117 aa11.27□□□□□ -0.61
RAPGEF3-218ENST00000548919 RPL27AP46776 148 aaKnown RBP11.27□□□□□ -0.61
RAPGEF3-218ENST00000548919 DLX6P56179 175 aa11.27□□□□□ -0.61
RAPGEF3-218ENST00000548919 ETFRF1Q6IPR1 90 aa11.27□□□□□ -0.61
RAPGEF3-218ENST00000548919 RBPMS2Q6ZRY4 209 aaKnown RBP11.27□□□□□ -0.61
RAPGEF3-218ENST00000548919 PRNTQ86SH4 94 aa11.27□□□□□ -0.61
RAPGEF3-218ENST00000548919 TMEM116Q8NCL8 245 aa11.27□□□□□ -0.61
RAPGEF3-218ENST00000548919 RELNP78509 3460 aa11.27□□□□□ -0.61
RAPGEF3-218ENST00000548919 A0A0G2JNJ9 132 aa11.27□□□□□ -0.61
RAPGEF3-218ENST00000548919 LEPROTL1O95214 131 aa11.27□□□□□ -0.61
RAPGEF3-218ENST00000548919 CSN3P07498 182 aa11.27□□□□□ -0.61
RAPGEF3-218ENST00000548919 Q6ZS92 163 aa11.27□□□□□ -0.61
RAPGEF3-218ENST00000548919 GOLT1AQ6ZVE7 132 aa11.27□□□□□ -0.61
RAPGEF3-218ENST00000548919 LINC00311Q8N616 119 aa11.27□□□□□ -0.61
RAPGEF3-218ENST00000548919 RNASE8Q8TDE3 154 aaKnown RBP11.27□□□□□ -0.61
RAPGEF3-218ENST00000548919 C22orf15Q8WYQ4 148 aa11.27□□□□□ -0.61
RAPGEF3-218ENST00000548919 PMCHL2Q9BQD1 86 aa11.27□□□□□ -0.61
RAPGEF3-218ENST00000548919 Q9UFV3 132 aa11.27□□□□□ -0.61
RAPGEF3-218ENST00000548919 ZNF292O60281 2723 aa11.26□□□□□ -0.61
RAPGEF3-218ENST00000548919 C16orf97H3BN30 126 aa11.26□□□□□ -0.61
RAPGEF3-218ENST00000548919 CHEK1O14757 476 aa11.26□□□□□ -0.61
RAPGEF3-218ENST00000548919 THBDP07204 575 aa11.26□□□□□ -0.61
RAPGEF3-218ENST00000548919 PSG1P11464 419 aa11.26□□□□□ -0.61
RAPGEF3-218ENST00000548919 COL8A1P27658 744 aa11.26□□□□□ -0.61
RAPGEF3-218ENST00000548919 MPV17L2Q567V2 206 aa11.26□□□□□ -0.61
RAPGEF3-218ENST00000548919 ZNF738Q8NE65 137 aa11.26□□□□□ -0.61
RAPGEF3-218ENST00000548919 C8orf46Q8TAG6 207 aa11.26□□□□□ -0.61
RAPGEF3-218ENST00000548919 LOC102724200A0A096LPH7 203 aaPredicted RBP11.26□□□□□ -0.61
RAPGEF3-218ENST00000548919 IGHV1-69-2A0A0G2JMI3 117 aa11.26□□□□□ -0.61
RAPGEF3-218ENST00000548919 TNFRSF13BO14836 293 aaPredicted RBP11.26□□□□□ -0.61
RAPGEF3-218ENST00000548919 MC5RP33032 325 aa11.26□□□□□ -0.61
RAPGEF3-218ENST00000548919 FAM71F2Q6NXP2 309 aa11.26□□□□□ -0.61
RAPGEF3-218ENST00000548919 Q86TA4 180 aa11.26□□□□□ -0.61
RAPGEF3-218ENST00000548919 SMIM12Q96EX1 92 aa11.26□□□□□ -0.61
RAPGEF3-218ENST00000548919 ACACAQ13085 2346 aa11.26□□□□□ -0.61
RAPGEF3-218ENST00000548919 APC2O95996 2303 aa11.25□□□□□ -0.61
RAPGEF3-218ENST00000548919 UBE2V1Q13404 147 aa11.25□□□□□ -0.61
RAPGEF3-218ENST00000548919 TMEM155Q4W5P6 130 aa11.25□□□□□ -0.61
RAPGEF3-218ENST00000548919 IGFL3Q6UXB1 125 aa11.25□□□□□ -0.61
RAPGEF3-218ENST00000548919 FAM57AQ8TBR7 257 aa11.25□□□□□ -0.61
RAPGEF3-218ENST00000548919 ZNF492Q9P255 531 aa11.25□□□□□ -0.61
RAPGEF3-218ENST00000548919 HIGD1AQ9Y241 93 aa11.25□□□□□ -0.61
RAPGEF3-218ENST00000548919 SVEP1Q4LDE5 3571 aa11.25□□□□□ -0.61
RAPGEF3-218ENST00000548919 CRXO43186 299 aaPredicted RBP11.25□□□□□ -0.61
RAPGEF3-218ENST00000548919 IGLV2-11P01706 119 aa11.25□□□□□ -0.61
RAPGEF3-218ENST00000548919 LGALS7P47929 136 aa11.25□□□□□ -0.61
RAPGEF3-218ENST00000548919 C17orf77Q96MU5 243 aa11.25□□□□□ -0.61
RAPGEF3-218ENST00000548919 CT83Q5H943 113 aa11.24□□□□□ -0.61
RAPGEF3-218ENST00000548919 CHCHD1Q96BP2 118 aaKnown RBP11.24□□□□□ -0.61
RAPGEF3-218ENST00000548919 TMEM133Q9H2Q1 129 aa11.24□□□□□ -0.61
RAPGEF3-218ENST00000548919 SIGLEC9Q9Y336 463 aa11.24□□□□□ -0.61
RAPGEF3-218ENST00000548919 ZNF785A8K8V0 405 aa11.24□□□□□ -0.61
RAPGEF3-218ENST00000548919 RBP4P02753 201 aa11.24□□□□□ -0.61
RAPGEF3-218ENST00000548919 PCP4P48539 62 aa11.24□□□□□ -0.61
RAPGEF3-218ENST00000548919 TMUB1Q9BVT8 246 aa11.24□□□□□ -0.61
RAPGEF3-218ENST00000548919 SLC25A39Q9BZJ4 359 aaPredicted RBP11.24□□□□□ -0.61
RAPGEF3-218ENST00000548919 PVRIGQ6DKI7 326 aa11.23□□□□□ -0.61
RAPGEF3-218ENST00000548919 C8orf31Q8N9H6 132 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms