RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 PLP1P60201 277 aa15.51■□□□□ 0.07
CTDSP2-204ENST00000548823 PNRC1Q12796 327 aaPredicted RBP15.51■□□□□ 0.07
CTDSP2-204ENST00000548823 TVP23CQ96ET8 276 aa15.51■□□□□ 0.07
CTDSP2-204ENST00000548823 RASL11BQ9BPW5 248 aa15.51■□□□□ 0.07
CTDSP2-204ENST00000548823 NIPSNAP3BQ9BS92 247 aa15.51■□□□□ 0.07
CTDSP2-204ENST00000548823 DNAJC4Q9NNZ3 241 aa15.51■□□□□ 0.07
CTDSP2-204ENST00000548823 TMEM167BQ9NRX6 74 aa15.51■□□□□ 0.07
CTDSP2-204ENST00000548823 SERTAD4Q9NUC0 356 aa15.51■□□□□ 0.07
CTDSP2-204ENST00000548823 ELOA3CA0A087WX78 387 aaPredicted RBP15.5■□□□□ 0.07
CTDSP2-204ENST00000548823 IGHV7-81A0A0B4J1V7 117 aa15.5■□□□□ 0.07
CTDSP2-204ENST00000548823 PDE6DO43924 150 aa15.5■□□□□ 0.07
CTDSP2-204ENST00000548823 EGFEM1PQ0D2K5 195 aa15.5■□□□□ 0.07
CTDSP2-204ENST00000548823 ASPHD1Q5U4P2 390 aa15.5■□□□□ 0.07
CTDSP2-204ENST00000548823 WIPF2Q8TF74 440 aaPredicted RBP15.5■□□□□ 0.07
CTDSP2-204ENST00000548823 TMEM68Q96MH6 324 aa15.5■□□□□ 0.07
CTDSP2-204ENST00000548823 TUBA4BQ9H853 241 aa15.5■□□□□ 0.07
CTDSP2-204ENST00000548823 C7orf77A4D0Y5 90 aa15.49■□□□□ 0.07
CTDSP2-204ENST00000548823 B4DEV8 164 aa15.49■□□□□ 0.07
CTDSP2-204ENST00000548823 F6UZH7 168 aa15.49■□□□□ 0.07
CTDSP2-204ENST00000548823 C8orf88P0DMB2 117 aa15.49■□□□□ 0.07
CTDSP2-204ENST00000548823 APELAP0DMC3 54 aa15.49■□□□□ 0.07
CTDSP2-204ENST00000548823 GATA2P23769 480 aaPredicted RBP15.49■□□□□ 0.07
CTDSP2-204ENST00000548823 SPATA31B1PQ5VZV4 182 aa15.49■□□□□ 0.07
CTDSP2-204ENST00000548823 MIR17HGQ75NE6 70 aa15.49■□□□□ 0.07
CTDSP2-204ENST00000548823 IQCF2Q8IXL9 164 aa15.49■□□□□ 0.07
CTDSP2-204ENST00000548823 TMEM37Q8WXS4 190 aa15.49■□□□□ 0.07
CTDSP2-204ENST00000548823 SMCO4Q9NRQ5 59 aa15.49■□□□□ 0.07
CTDSP2-204ENST00000548823 IGLV11-55A0A075B6I3 123 aa15.49■□□□□ 0.07
CTDSP2-204ENST00000548823 K7EIM0 57 aa15.49■□□□□ 0.07
CTDSP2-204ENST00000548823 M0R036 132 aa15.49■□□□□ 0.07
CTDSP2-204ENST00000548823 FABP1P07148 127 aa15.49■□□□□ 0.07
CTDSP2-204ENST00000548823 EGR2P11161 476 aaPredicted RBP15.49■□□□□ 0.07
CTDSP2-204ENST00000548823 NDPQ00604 133 aa15.49■□□□□ 0.07
CTDSP2-204ENST00000548823 RBM14Q96PK6 669 aaKnown RBP15.49■□□□□ 0.07
CTDSP2-204ENST00000548823 PUS1Q9Y606 427 aaKnown RBP eCLIP15.49■□□□□ 0.07
CTDSP2-204ENST00000548823 SACSQ9NZJ4 4579 aa15.48■□□□□ 0.07
CTDSP2-204ENST00000548823 A0A087WWC5 75 aa15.48■□□□□ 0.07
CTDSP2-204ENST00000548823 C11orf94C9JXX5 98 aa15.48■□□□□ 0.07
CTDSP2-204ENST00000548823 COX7A2P2O60397 106 aa15.48■□□□□ 0.07
CTDSP2-204ENST00000548823 IGLC1P0CG04 106 aa15.48■□□□□ 0.07
CTDSP2-204ENST00000548823 HIST1H1BP16401 226 aaKnown RBP15.48■□□□□ 0.07
CTDSP2-204ENST00000548823 ZNF90Q03938 601 aa15.48■□□□□ 0.07
CTDSP2-204ENST00000548823 C10orf113Q5VZT2 155 aa15.48■□□□□ 0.07
CTDSP2-204ENST00000548823 C19orf35Q6ZS72 473 aa15.48■□□□□ 0.07
CTDSP2-204ENST00000548823 FANCD2OSQ96PS1 177 aa15.48■□□□□ 0.07
CTDSP2-204ENST00000548823 ZNF702PQ9H963 129 aa15.48■□□□□ 0.07
CTDSP2-204ENST00000548823 THYN1Q9P016 225 aa15.48■□□□□ 0.07
CTDSP2-204ENST00000548823 TRAV30A0A087WSZ9 112 aa15.47■□□□□ 0.07
CTDSP2-204ENST00000548823 CASC10Q5T4H9 136 aa15.47■□□□□ 0.07
CTDSP2-204ENST00000548823 Q8N2B8 174 aa15.47■□□□□ 0.07
CTDSP2-204ENST00000548823 C5orf56Q8N8D9 126 aa15.47■□□□□ 0.07
CTDSP2-204ENST00000548823 PIFOQ8TCI5 191 aa15.47■□□□□ 0.07
CTDSP2-204ENST00000548823 FAM103A1Q9BTL3 118 aaKnown RBP15.47■□□□□ 0.07
CTDSP2-204ENST00000548823 SDF2L1Q9HCN8 221 aa15.47■□□□□ 0.07
CTDSP2-204ENST00000548823 RPS10P5Q9NQ39 176 aa15.47■□□□□ 0.07
CTDSP2-204ENST00000548823 MOB4Q9Y3A3 225 aa15.47■□□□□ 0.07
CTDSP2-204ENST00000548823 ZNF727A8MUV8 499 aa15.46■□□□□ 0.07
CTDSP2-204ENST00000548823 IGHV3-48P01763 117 aa15.46■□□□□ 0.07
CTDSP2-204ENST00000548823 PF4V1P10720 104 aa15.46■□□□□ 0.07
CTDSP2-204ENST00000548823 CEBPGP53567 150 aa15.46■□□□□ 0.07
CTDSP2-204ENST00000548823 PATE2Q6UY27 113 aa15.46■□□□□ 0.07
CTDSP2-204ENST00000548823 NAT8Q9UHE5 227 aa15.46■□□□□ 0.07
CTDSP2-204ENST00000548823 CRIP2P52943 208 aaPredicted RBP15.45■□□□□ 0.06
CTDSP2-204ENST00000548823 CBLN2Q8IUK8 224 aa15.45■□□□□ 0.06
CTDSP2-204ENST00000548823 ZNF503Q96F45 646 aa15.45■□□□□ 0.06
CTDSP2-204ENST00000548823 FAM167A-AS1Q96KT0 104 aa15.45■□□□□ 0.06
CTDSP2-204ENST00000548823 HOXD3P31249 432 aaPredicted RBP15.44■□□□□ 0.06
CTDSP2-204ENST00000548823 FCGR2BP31994 310 aaPredicted RBP15.44■□□□□ 0.06
CTDSP2-204ENST00000548823 CST9LP1Q5W188 147 aa15.44■□□□□ 0.06
CTDSP2-204ENST00000548823 TMEM88Q6PEY1 159 aa15.44■□□□□ 0.06
CTDSP2-204ENST00000548823 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.44■□□□□ 0.06
CTDSP2-204ENST00000548823 STXBP6Q8NFX7 210 aa15.44■□□□□ 0.06
CTDSP2-204ENST00000548823 TXN2Q99757 166 aa15.44■□□□□ 0.06
CTDSP2-204ENST00000548823 SMIM7Q9BQ49 75 aa15.44■□□□□ 0.06
CTDSP2-204ENST00000548823 A0A1W2PRX2 142 aa15.43■□□□□ 0.06
CTDSP2-204ENST00000548823 HYPMO75409 117 aa15.43■□□□□ 0.06
CTDSP2-204ENST00000548823 PF4P02776 101 aa15.43■□□□□ 0.06
CTDSP2-204ENST00000548823 ATP5G3P48201 142 aa15.43■□□□□ 0.06
CTDSP2-204ENST00000548823 MFAP4P55083 255 aa15.43■□□□□ 0.06
CTDSP2-204ENST00000548823 TMEM241Q24JQ0 296 aa15.43■□□□□ 0.06
CTDSP2-204ENST00000548823 AKIRIN2Q53H80 203 aa15.43■□□□□ 0.06
CTDSP2-204ENST00000548823 C16orf82Q7Z2V1 217 aa15.43■□□□□ 0.06
CTDSP2-204ENST00000548823 C15orf54Q8N8G6 183 aa15.43■□□□□ 0.06
CTDSP2-204ENST00000548823 C11orf52Q96A22 123 aa15.43■□□□□ 0.06
CTDSP2-204ENST00000548823 HSPB9Q9BQS6 159 aa15.43■□□□□ 0.06
CTDSP2-204ENST00000548823 SLC25A2Q9BXI2 301 aa15.43■□□□□ 0.06
CTDSP2-204ENST00000548823 PARLQ9H300 379 aa15.43■□□□□ 0.06
CTDSP2-204ENST00000548823 A0A1W2PRE2 83 aa15.42■□□□□ 0.06
CTDSP2-204ENST00000548823 A6NDX4 124 aa15.42■□□□□ 0.06
CTDSP2-204ENST00000548823 M0QZK8 103 aa15.42■□□□□ 0.06
CTDSP2-204ENST00000548823 NUPL2O15504 423 aaKnown RBP15.42■□□□□ 0.06
CTDSP2-204ENST00000548823 IGKV1-17P01599 117 aa15.42■□□□□ 0.06
CTDSP2-204ENST00000548823 UBE2G2P60604 165 aa15.42■□□□□ 0.06
CTDSP2-204ENST00000548823 YPEL3P61236 119 aaPredicted RBP15.42■□□□□ 0.06
CTDSP2-204ENST00000548823 VN1R17PQ8TDU5 208 aa15.42■□□□□ 0.06
CTDSP2-204ENST00000548823 DPF1Q92782 380 aa15.42■□□□□ 0.06
CTDSP2-204ENST00000548823 UHRF2Q96PU4 802 aa15.42■□□□□ 0.06
CTDSP2-204ENST00000548823 C20orf24Q9BUV8 137 aa15.42■□□□□ 0.06
CTDSP2-204ENST00000548823 GPR61Q9BZJ8 451 aa15.42■□□□□ 0.06
CTDSP2-204ENST00000548823 ZNF355PQ9NSJ1 428 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms