RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 C2CD4CQ8TF44 421 aa12.02□□□□□ -0.49
SSH1-208ENST00000548522 NUPL2O15504 423 aaKnown RBP12.01□□□□□ -0.49
SSH1-208ENST00000548522 PITX3O75364 302 aa12.01□□□□□ -0.49
SSH1-208ENST00000548522 YIF1AO95070 293 aa12.01□□□□□ -0.49
SSH1-208ENST00000548522 IFNA4P05014 189 aa12.01□□□□□ -0.49
SSH1-208ENST00000548522 NKX2-1P43699 371 aaPredicted RBP12.01□□□□□ -0.49
SSH1-208ENST00000548522 LEMD1Q68G75 181 aa12.01□□□□□ -0.49
SSH1-208ENST00000548522 FAM24BQ8N5W8 94 aa12.01□□□□□ -0.49
SSH1-208ENST00000548522 ATP6V0BQ99437 205 aa12.01□□□□□ -0.49
SSH1-208ENST00000548522 ARV1Q9H2C2 271 aa12.01□□□□□ -0.49
SSH1-208ENST00000548522 PKD1P98161 4303 aa12□□□□□ -0.49
SSH1-208ENST00000548522 FAM90A26D6RGX4 464 aa12□□□□□ -0.49
SSH1-208ENST00000548522 LPAR6P43657 344 aa12□□□□□ -0.49
SSH1-208ENST00000548522 BAXQ07812 192 aa12□□□□□ -0.49
SSH1-208ENST00000548522 LILRB2Q8N423 598 aa12□□□□□ -0.49
SSH1-208ENST00000548522 RNF141Q8WVD5 230 aa12□□□□□ -0.49
SSH1-208ENST00000548522 SAT2Q96F10 170 aaPredicted RBP12□□□□□ -0.49
SSH1-208ENST00000548522 SLC25A31Q9H0C2 315 aa12□□□□□ -0.49
SSH1-208ENST00000548522 APLNQ9ULZ1 77 aa12□□□□□ -0.49
SSH1-208ENST00000548522 IGHV3-66A0A0C4DH42 116 aa11.99□□□□□ -0.49
SSH1-208ENST00000548522 IGLL5B9A064 214 aa11.99□□□□□ -0.49
SSH1-208ENST00000548522 I3L2K1 104 aa11.99□□□□□ -0.49
SSH1-208ENST00000548522 APOHP02749 345 aaPredicted RBP11.99□□□□□ -0.49
SSH1-208ENST00000548522 TCF24Q7RTU0 167 aa11.99□□□□□ -0.49
SSH1-208ENST00000548522 Q8NAQ8 132 aa11.99□□□□□ -0.49
SSH1-208ENST00000548522 MISP3Q96FF7 219 aa11.99□□□□□ -0.49
SSH1-208ENST00000548522 RCL1Q9Y2P8 373 aaKnown RBP11.99□□□□□ -0.49
SSH1-208ENST00000548522 LSM5Q9Y4Y9 91 aaKnown RBP11.99□□□□□ -0.49
SSH1-208ENST00000548522 BORCS7-ASMTA0A0B4J1R7 106 aa11.98□□□□□ -0.49
SSH1-208ENST00000548522 TAS2R30P59541 319 aa11.98□□□□□ -0.49
SSH1-208ENST00000548522 RELQ04864 619 aaPredicted RBP11.98□□□□□ -0.49
SSH1-208ENST00000548522 OR1P1Q8NH06 330 aa11.98□□□□□ -0.49
SSH1-208ENST00000548522 RAB40CQ96S21 281 aa11.98□□□□□ -0.49
SSH1-208ENST00000548522 LYRM2Q9NU23 88 aaPredicted RBP11.98□□□□□ -0.49
SSH1-208ENST00000548522 TMEM14BQ9NUH8 114 aa11.98□□□□□ -0.49
SSH1-208ENST00000548522 CACFD1Q9UGQ2 172 aa11.98□□□□□ -0.49
SSH1-208ENST00000548522 C15orf61A6NNL5 157 aa11.97□□□□□ -0.49
SSH1-208ENST00000548522 KRBOX1C9JBD0 128 aa11.97□□□□□ -0.49
SSH1-208ENST00000548522 SCGB1D2O95969 90 aa11.97□□□□□ -0.49
SSH1-208ENST00000548522 MT-CO2P00403 227 aa11.97□□□□□ -0.49
SSH1-208ENST00000548522 GIG44P09565 113 aaPredicted RBP11.97□□□□□ -0.49
SSH1-208ENST00000548522 DEFB131AP59861 70 aa11.97□□□□□ -0.49
SSH1-208ENST00000548522 UQCC3Q6UW78 93 aa11.97□□□□□ -0.49
SSH1-208ENST00000548522 MS4A6AQ9H2W1 248 aa11.97□□□□□ -0.49
SSH1-208ENST00000548522 PRNDQ9UKY0 176 aa11.97□□□□□ -0.49
SSH1-208ENST00000548522 IGHV4-28A0A0C4DH34 117 aa11.96□□□□□ -0.49
SSH1-208ENST00000548522 RAB19A4D1S5 217 aa11.96□□□□□ -0.49
SSH1-208ENST00000548522 SEC11BP0C7V7 166 aa11.96□□□□□ -0.49
SSH1-208ENST00000548522 P0C879 139 aa11.96□□□□□ -0.49
SSH1-208ENST00000548522 RBMY1A1P0DJD3 496 aaKnown RBP11.96□□□□□ -0.49
SSH1-208ENST00000548522 RBMY1CP0DJD4 496 aa11.96□□□□□ -0.49
SSH1-208ENST00000548522 RAB5CP51148 216 aa11.96□□□□□ -0.49
SSH1-208ENST00000548522 MFAP4P55083 255 aa11.96□□□□□ -0.49
SSH1-208ENST00000548522 ZNF266Q14584 549 aa11.96□□□□□ -0.49
SSH1-208ENST00000548522 RBMY1FQ15415 496 aaKnown RBP11.96□□□□□ -0.49
SSH1-208ENST00000548522 TOMM20LQ6UXN7 152 aa11.96□□□□□ -0.49
SSH1-208ENST00000548522 PINX1Q96BK5 328 aaKnown RBP11.96□□□□□ -0.49
SSH1-208ENST00000548522 DFFBO76075 338 aa11.95□□□□□ -0.5
SSH1-208ENST00000548522 SULT1A2P50226 295 aa11.95□□□□□ -0.5
SSH1-208ENST00000548522 SPINK9Q5DT21 86 aa11.95□□□□□ -0.5
SSH1-208ENST00000548522 TOR2AQ5JU69 321 aa11.95□□□□□ -0.5
SSH1-208ENST00000548522 Q6ZTC4 211 aa11.95□□□□□ -0.5
SSH1-208ENST00000548522 GPR146Q96CH1 333 aa11.95□□□□□ -0.5
SSH1-208ENST00000548522 GINS3Q9BRX5 216 aa11.95□□□□□ -0.5
SSH1-208ENST00000548522 ZFAND3Q9H8U3 227 aa11.95□□□□□ -0.5
SSH1-208ENST00000548522 A0A1B0GVY2 172 aa11.94□□□□□ -0.5
SSH1-208ENST00000548522 IGKV1-39P01597 117 aa11.94□□□□□ -0.5
SSH1-208ENST00000548522 IGKV1D-39P04432 117 aa11.94□□□□□ -0.5
SSH1-208ENST00000548522 HLA-DMBP28068 263 aa11.94□□□□□ -0.5
SSH1-208ENST00000548522 CMC4P56277 68 aaPredicted RBP11.94□□□□□ -0.5
SSH1-208ENST00000548522 TCTAP57738 103 aa11.94□□□□□ -0.5
SSH1-208ENST00000548522 VAMP2P63027 116 aa11.94□□□□□ -0.5
SSH1-208ENST00000548522 BLOC1S1P78537 153 aa11.94□□□□□ -0.5
SSH1-208ENST00000548522 AARDQ4LEZ3 155 aa11.94□□□□□ -0.5
SSH1-208ENST00000548522 RPL7L1Q6DKI1 246 aaKnown RBP11.94□□□□□ -0.5
SSH1-208ENST00000548522 SMIM8Q96KF7 97 aa11.94□□□□□ -0.5
SSH1-208ENST00000548522 VSIRQ9H7M9 311 aa11.94□□□□□ -0.5
SSH1-208ENST00000548522 TEX46H3BTG2 121 aa11.93□□□□□ -0.5
SSH1-208ENST00000548522 WRBO00258 174 aa11.93□□□□□ -0.5
SSH1-208ENST00000548522 GNG7O60262 68 aa11.93□□□□□ -0.5
SSH1-208ENST00000548522 MED6O75586 246 aa11.93□□□□□ -0.5
SSH1-208ENST00000548522 IGKV1-5P01602 117 aa11.93□□□□□ -0.5
SSH1-208ENST00000548522 AKR1C2P52895 323 aa11.93□□□□□ -0.5
SSH1-208ENST00000548522 PAFAH1B2P68402 229 aa11.93□□□□□ -0.5
SSH1-208ENST00000548522 IZUMO4Q1ZYL8 232 aa11.93□□□□□ -0.5
SSH1-208ENST00000548522 CCDC28AQ8IWP9 274 aa11.93□□□□□ -0.5
SSH1-208ENST00000548522 TMEM252Q8N6L7 170 aa11.93□□□□□ -0.5
SSH1-208ENST00000548522 ZNF114Q8NC26 417 aa11.93□□□□□ -0.5
SSH1-208ENST00000548522 HRH4Q9H3N8 390 aa11.93□□□□□ -0.5
SSH1-208ENST00000548522 PUS1Q9Y606 427 aaKnown RBP eCLIP11.93□□□□□ -0.5
SSH1-208ENST00000548522 IGHV4-4A0A075B6R2 117 aa11.92□□□□□ -0.5
SSH1-208ENST00000548522 ELOA3CA0A087WX78 387 aaPredicted RBP11.92□□□□□ -0.5
SSH1-208ENST00000548522 DNASE2O00115 360 aaPredicted RBP11.92□□□□□ -0.5
SSH1-208ENST00000548522 POLR2GP62487 172 aaKnown RBP eCLIP11.92□□□□□ -0.5
SSH1-208ENST00000548522 RPL11P62913 178 aaKnown RBP11.92□□□□□ -0.5
SSH1-208ENST00000548522 PRCDQ00LT1 54 aa11.92□□□□□ -0.5
SSH1-208ENST00000548522 TRPT1Q86TN4 253 aaKnown RBP11.92□□□□□ -0.5
SSH1-208ENST00000548522 RNASE11Q8TAA1 199 aaKnown RBP11.92□□□□□ -0.5
SSH1-208ENST00000548522 TXN2Q99757 166 aa11.92□□□□□ -0.5
SSH1-208ENST00000548522 SCRT1Q9BWW7 348 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms