RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 USF2Q15853 346 aaPredicted RBP12.3□□□□□ -0.44
BRF1-212ENST00000547562 KIAA1644Q3SXP7 199 aa12.3□□□□□ -0.44
BRF1-212ENST00000547562 DTX2Q86UW9 622 aa12.3□□□□□ -0.44
BRF1-212ENST00000547562 FMC1Q96HJ9 113 aa12.3□□□□□ -0.44
BRF1-212ENST00000547562 TMEM14CQ9P0S9 112 aa12.3□□□□□ -0.44
BRF1-212ENST00000547562 NAGKQ9UJ70 344 aa12.3□□□□□ -0.44
BRF1-212ENST00000547562 OR10J3Q5JRS4 329 aa12.29□□□□□ -0.44
BRF1-212ENST00000547562 RASL11AQ6T310 242 aa12.29□□□□□ -0.44
BRF1-212ENST00000547562 WIPF2Q8TF74 440 aaPredicted RBP12.29□□□□□ -0.44
BRF1-212ENST00000547562 MLST8Q9BVC4 326 aa12.29□□□□□ -0.44
BRF1-212ENST00000547562 ZNF331Q9NQX6 463 aaPredicted RBP12.29□□□□□ -0.44
BRF1-212ENST00000547562 MRPL27Q9P0M9 148 aaKnown RBP12.29□□□□□ -0.44
BRF1-212ENST00000547562 WNK2Q9Y3S1 2297 aa12.29□□□□□ -0.44
BRF1-212ENST00000547562 BMPR1BO00238 502 aa12.29□□□□□ -0.44
BRF1-212ENST00000547562 TOMM40O96008 361 aa12.29□□□□□ -0.44
BRF1-212ENST00000547562 TCRAP04437 139 aa12.29□□□□□ -0.44
BRF1-212ENST00000547562 GPR6P46095 362 aaPredicted RBP12.29□□□□□ -0.44
BRF1-212ENST00000547562 Q6ZWC4 215 aa12.29□□□□□ -0.44
BRF1-212ENST00000547562 NUP35Q8NFH5 326 aa12.29□□□□□ -0.44
BRF1-212ENST00000547562 FAM103A1Q9BTL3 118 aaKnown RBP12.29□□□□□ -0.44
BRF1-212ENST00000547562 A0A1W2PRD5 423 aa12.28□□□□□ -0.44
BRF1-212ENST00000547562 A0A1W2PRF3 423 aa12.28□□□□□ -0.44
BRF1-212ENST00000547562 A0A1W2PRM7 423 aa12.28□□□□□ -0.44
BRF1-212ENST00000547562 HES1Q14469 280 aa12.28□□□□□ -0.44
BRF1-212ENST00000547562 C5orf64Q2M2E5 130 aa12.28□□□□□ -0.44
BRF1-212ENST00000547562 FBLN7Q53RD9 439 aa12.28□□□□□ -0.44
BRF1-212ENST00000547562 TSKUQ8WUA8 353 aa12.28□□□□□ -0.44
BRF1-212ENST00000547562 LTAP01374 205 aa12.28□□□□□ -0.44
BRF1-212ENST00000547562 C1orf122Q6ZSJ8 110 aa12.28□□□□□ -0.44
BRF1-212ENST00000547562 ZNF586Q9NXT0 402 aa12.28□□□□□ -0.44
BRF1-212ENST00000547562 APCSP02743 223 aa12.27□□□□□ -0.44
BRF1-212ENST00000547562 SRIP30626 198 aa12.27□□□□□ -0.44
BRF1-212ENST00000547562 BRS3P32247 399 aa12.27□□□□□ -0.44
BRF1-212ENST00000547562 TMEM68Q96MH6 324 aa12.27□□□□□ -0.44
BRF1-212ENST00000547562 RBM14Q96PK6 669 aaKnown RBP12.27□□□□□ -0.44
BRF1-212ENST00000547562 HSPB9Q9BQS6 159 aa12.27□□□□□ -0.44
BRF1-212ENST00000547562 SAMD10Q9BYL1 202 aa12.27□□□□□ -0.44
BRF1-212ENST00000547562 OTORQ9NRC9 128 aa12.27□□□□□ -0.44
BRF1-212ENST00000547562 CHD8Q9HCK8 2581 aa12.27□□□□□ -0.45
BRF1-212ENST00000547562 NCOR2Q9Y618 2525 aa12.27□□□□□ -0.45
BRF1-212ENST00000547562 A0A1W2PPR1 153 aa12.27□□□□□ -0.45
BRF1-212ENST00000547562 VMO1Q7Z5L0 202 aa12.27□□□□□ -0.45
BRF1-212ENST00000547562 NEU1Q99519 415 aa12.27□□□□□ -0.45
BRF1-212ENST00000547562 HIGD1CA8MV81 97 aa12.26□□□□□ -0.45
BRF1-212ENST00000547562 CD33P20138 364 aa12.26□□□□□ -0.45
BRF1-212ENST00000547562 SLAQ13239 276 aa12.26□□□□□ -0.45
BRF1-212ENST00000547562 ZNF124Q15973 351 aa12.26□□□□□ -0.45
BRF1-212ENST00000547562 CCDC144NLQ6NUI1 221 aa12.26□□□□□ -0.45
BRF1-212ENST00000547562 KIR3DL3Q8N743 410 aa12.26□□□□□ -0.45
BRF1-212ENST00000547562 POLR3KQ9Y2Y1 108 aaPredicted RBP12.26□□□□□ -0.45
BRF1-212ENST00000547562 ZNF253O75346 499 aa12.26□□□□□ -0.45
BRF1-212ENST00000547562 KLF17Q5JT82 389 aaPredicted RBP12.26□□□□□ -0.45
BRF1-212ENST00000547562 LINC00322Q6ZN03 302 aaPredicted RBP12.26□□□□□ -0.45
BRF1-212ENST00000547562 SHANK2-AS3Q9BTD1 123 aa12.26□□□□□ -0.45
BRF1-212ENST00000547562 BTF3P20290 206 aaKnown RBP12.25□□□□□ -0.45
BRF1-212ENST00000547562 ZFP36P26651 326 aaKnown RBP12.25□□□□□ -0.45
BRF1-212ENST00000547562 DYNAPQ8N1N2 210 aa12.25□□□□□ -0.45
BRF1-212ENST00000547562 RCHY1Q96PM5 261 aa12.25□□□□□ -0.45
BRF1-212ENST00000547562 NDUFAF3Q9BU61 184 aa12.25□□□□□ -0.45
BRF1-212ENST00000547562 PRSS22Q9GZN4 317 aa12.25□□□□□ -0.45
BRF1-212ENST00000547562 RPP21Q9H633 154 aaKnown RBP12.25□□□□□ -0.45
BRF1-212ENST00000547562 ZNF492Q9P255 531 aa12.25□□□□□ -0.45
BRF1-212ENST00000547562 NPIPB5A8MRT5 1133 aa12.25□□□□□ -0.45
BRF1-212ENST00000547562 H3BRN7 92 aa12.25□□□□□ -0.45
BRF1-212ENST00000547562 GPX1P07203 203 aa12.25□□□□□ -0.45
BRF1-212ENST00000547562 CDKN1AP38936 164 aa12.25□□□□□ -0.45
BRF1-212ENST00000547562 GDF5OSQ5U4N7 250 aa12.25□□□□□ -0.45
BRF1-212ENST00000547562 ZNF562Q6V9R5 426 aa12.25□□□□□ -0.45
BRF1-212ENST00000547562 SIGLECL1Q8N7X8 197 aa12.25□□□□□ -0.45
BRF1-212ENST00000547562 ZNF491Q8N8L2 437 aa12.25□□□□□ -0.45
BRF1-212ENST00000547562 KCNS1Q96KK3 526 aa12.25□□□□□ -0.45
BRF1-212ENST00000547562 TBX15Q96SF7 602 aa12.25□□□□□ -0.45
BRF1-212ENST00000547562 C19orf71A6NCJ1 209 aa12.24□□□□□ -0.45
BRF1-212ENST00000547562 ZNF705FA8MVS1 300 aaPredicted RBP12.24□□□□□ -0.45
BRF1-212ENST00000547562 OOSP1A8MZH6 123 aa12.24□□□□□ -0.45
BRF1-212ENST00000547562 ZNF705DP0CH99 300 aaPredicted RBP12.24□□□□□ -0.45
BRF1-212ENST00000547562 ZNF705BP0CI00 300 aaPredicted RBP12.24□□□□□ -0.45
BRF1-212ENST00000547562 HOXB4P17483 251 aaPredicted RBP12.24□□□□□ -0.45
BRF1-212ENST00000547562 C1orf194Q5T5A4 169 aa12.24□□□□□ -0.45
BRF1-212ENST00000547562 ATP5L2Q7Z4Y8 100 aa12.24□□□□□ -0.45
BRF1-212ENST00000547562 BPIFA4PQ86YQ2 179 aa12.24□□□□□ -0.45
BRF1-212ENST00000547562 EXOC3-AS1Q8N2X6 119 aa12.24□□□□□ -0.45
BRF1-212ENST00000547562 ARPC1AQ92747 370 aa12.24□□□□□ -0.45
BRF1-212ENST00000547562 RNF125Q96EQ8 232 aa12.24□□□□□ -0.45
BRF1-212ENST00000547562 IGLV11-55A0A075B6I3 123 aa12.23□□□□□ -0.45
BRF1-212ENST00000547562 VWC2LB2RUY7 222 aa12.23□□□□□ -0.45
BRF1-212ENST00000547562 IL4P05112 153 aa12.23□□□□□ -0.45
BRF1-212ENST00000547562 LY6DQ14210 128 aa12.23□□□□□ -0.45
BRF1-212ENST00000547562 CT83Q5H943 113 aa12.23□□□□□ -0.45
BRF1-212ENST00000547562 MINOS1Q5TGZ0 78 aa12.23□□□□□ -0.45
BRF1-212ENST00000547562 Q86TA4 180 aa12.23□□□□□ -0.45
BRF1-212ENST00000547562 Q8N6K4 173 aa12.23□□□□□ -0.45
BRF1-212ENST00000547562 FANCD2OSQ96PS1 177 aa12.23□□□□□ -0.45
BRF1-212ENST00000547562 MINOS1-NBL1R4GNA1 71 aa12.23□□□□□ -0.45
BRF1-212ENST00000547562 MED13LQ71F56 2210 aa12.23□□□□□ -0.45
BRF1-212ENST00000547562 TRBV19A0A075B6N1 114 aa12.23□□□□□ -0.45
BRF1-212ENST00000547562 A0A1W2PS18 150 aa12.23□□□□□ -0.45
BRF1-212ENST00000547562 A6NNC1 897 aa12.23□□□□□ -0.45
BRF1-212ENST00000547562 NCBP2LA6PVI3 153 aaKnown RBP12.23□□□□□ -0.45
BRF1-212ENST00000547562 NDUFS7O75251 213 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms