RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 LGALS9O00182 355 aa4.81□□□□□ -1.64
PRKDC-211ENST00000546304 YIF1AO95070 293 aa4.81□□□□□ -1.64
PRKDC-211ENST00000546304 FABP1P07148 127 aa4.81□□□□□ -1.64
PRKDC-211ENST00000546304 IGLL1P15814 213 aa4.81□□□□□ -1.64
PRKDC-211ENST00000546304 FAM106AQ4KMX7 169 aa4.81□□□□□ -1.64
PRKDC-211ENST00000546304 TMEM144Q7Z5S9 345 aa4.81□□□□□ -1.64
PRKDC-211ENST00000546304 THAP8Q8NA92 274 aa4.81□□□□□ -1.64
PRKDC-211ENST00000546304 WFDC9Q8NEX5 89 aa4.81□□□□□ -1.64
PRKDC-211ENST00000546304 OR5C1Q8NGR4 320 aa4.81□□□□□ -1.64
PRKDC-211ENST00000546304 TRGV9Q99603 122 aa4.81□□□□□ -1.64
PRKDC-211ENST00000546304 GINS3Q9BRX5 216 aa4.81□□□□□ -1.64
PRKDC-211ENST00000546304 MCRIP2Q9BUT9 160 aaKnown RBP4.81□□□□□ -1.64
PRKDC-211ENST00000546304 C20orf24Q9BUV8 137 aa4.81□□□□□ -1.64
PRKDC-211ENST00000546304 RNF126Q9BV68 326 aa4.81□□□□□ -1.64
PRKDC-211ENST00000546304 TMEM147Q9BVK8 224 aa4.81□□□□□ -1.64
PRKDC-211ENST00000546304 GPR61Q9BZJ8 451 aa4.81□□□□□ -1.64
PRKDC-211ENST00000546304 UQCC1Q9NVA1 299 aa4.81□□□□□ -1.64
PRKDC-211ENST00000546304 PEMTQ9UBM1 199 aa4.81□□□□□ -1.64
PRKDC-211ENST00000546304 UFC1Q9Y3C8 167 aa4.81□□□□□ -1.64
PRKDC-211ENST00000546304 HSPB11Q9Y547 144 aa4.81□□□□□ -1.64
PRKDC-211ENST00000546304 PUS1Q9Y606 427 aaKnown RBP eCLIP4.81□□□□□ -1.64
PRKDC-211ENST00000546304 C2orf70A6NJV1 201 aa4.8□□□□□ -1.64
PRKDC-211ENST00000546304 SMLR1H3BR10 107 aa4.8□□□□□ -1.64
PRKDC-211ENST00000546304 SAP30O75446 220 aa4.8□□□□□ -1.64
PRKDC-211ENST00000546304 TOMM40O96008 361 aa4.8□□□□□ -1.64
PRKDC-211ENST00000546304 IL4P05112 153 aa4.8□□□□□ -1.64
PRKDC-211ENST00000546304 EDN2P20800 178 aa4.8□□□□□ -1.64
PRKDC-211ENST00000546304 RPL12P30050 165 aaKnown RBP4.8□□□□□ -1.64
PRKDC-211ENST00000546304 S100A11P31949 105 aa4.8□□□□□ -1.64
PRKDC-211ENST00000546304 ELLP55199 621 aaPredicted RBP4.8□□□□□ -1.64
PRKDC-211ENST00000546304 YPEL3P61236 119 aaPredicted RBP4.8□□□□□ -1.64
PRKDC-211ENST00000546304 BLOC1S1P78537 153 aa4.8□□□□□ -1.64
PRKDC-211ENST00000546304 ZNF90Q03938 601 aa4.8□□□□□ -1.64
PRKDC-211ENST00000546304 CLINT1Q14677 625 aa4.8□□□□□ -1.64
PRKDC-211ENST00000546304 VWC2Q2TAL6 325 aa4.8□□□□□ -1.64
PRKDC-211ENST00000546304 Q5BKY6 102 aa4.8□□□□□ -1.64
PRKDC-211ENST00000546304 C9orf66Q5T8R8 295 aa4.8□□□□□ -1.64
PRKDC-211ENST00000546304 TOMM20LQ6UXN7 152 aa4.8□□□□□ -1.64
PRKDC-211ENST00000546304 ZNF546Q86UE3 836 aa4.8□□□□□ -1.64
PRKDC-211ENST00000546304 DYNLRB2Q8TF09 96 aa4.8□□□□□ -1.64
PRKDC-211ENST00000546304 RNF125Q96EQ8 232 aa4.8□□□□□ -1.64
PRKDC-211ENST00000546304 AQP10Q96PS8 301 aa4.8□□□□□ -1.64
PRKDC-211ENST00000546304 ATP5SQ99766 215 aa4.8□□□□□ -1.64
PRKDC-211ENST00000546304 ELOVL1Q9BW60 279 aa4.8□□□□□ -1.64
PRKDC-211ENST00000546304 FBXL17Q9UF56 701 aa4.8□□□□□ -1.64
PRKDC-211ENST00000546304 WDR83OSQ9Y284 106 aa4.8□□□□□ -1.64
PRKDC-211ENST00000546304 LSM4Q9Y4Z0 139 aaKnown RBP4.8□□□□□ -1.64
PRKDC-211ENST00000546304 A0A1B0GVG6 124 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 RNF222A6NCQ9 220 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 G3V4G9 280 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 ARPC5O15511 151 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 ZNF207O43670 478 aaKnown RBP4.79□□□□□ -1.64
PRKDC-211ENST00000546304 DFFBO76075 338 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 CSN3P07498 182 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 LINC00869P0C866 280 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 RD3LP0DJH9 198 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 PSG1P11464 419 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 FOLR2P14207 255 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 FGF7P21781 194 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 GCSHP23434 173 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 NUP62P37198 522 aaPredicted RBP4.79□□□□□ -1.64
PRKDC-211ENST00000546304 INSL3P51460 131 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 LYZP61626 148 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 OR2F1Q13607 317 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 USF2Q15853 346 aaPredicted RBP4.79□□□□□ -1.64
PRKDC-211ENST00000546304 ATP6V1FQ16864 119 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 BTNL8Q6UX41 500 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 IL34Q6ZMJ4 242 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 CYP2G1PQ6ZSU1 146 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 AKAP14Q86UN6 197 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 TCTE3Q8IZS6 198 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 INO80EQ8NBZ0 244 aaPredicted RBP4.79□□□□□ -1.64
PRKDC-211ENST00000546304 BPIFCQ8NFQ6 507 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 OR51G1Q8NGK1 321 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 Q8WTZ3 238 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 LINC00476Q8WZB0 136 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 MARC2Q969Z3 335 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 ST6GAL2Q96JF0 529 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 METTL26Q96S19 204 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 MGST2Q99735 147 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 PBDC1Q9BVG4 233 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 GGTLC1Q9BX51 225 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 SMIM3Q9BZL3 60 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 NPVFQ9HCQ7 196 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 SIGLEC8Q9NYZ4 499 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 TNFSF18Q9UNG2 199 aa4.79□□□□□ -1.64
PRKDC-211ENST00000546304 IGHV3-49A0A0A0MS15 119 aa4.78□□□□□ -1.64
PRKDC-211ENST00000546304 IGHV7-4-1A0A0J9YVY3 117 aa4.78□□□□□ -1.64
PRKDC-211ENST00000546304 K7EMT4 169 aa4.78□□□□□ -1.64
PRKDC-211ENST00000546304 AGPAT2O15120 278 aa4.78□□□□□ -1.64
PRKDC-211ENST00000546304 MPDU1O75352 247 aa4.78□□□□□ -1.64
PRKDC-211ENST00000546304 CFDP00746 253 aaPredicted RBP4.78□□□□□ -1.64
PRKDC-211ENST00000546304 IGLV1-51P01701 117 aa4.78□□□□□ -1.64
PRKDC-211ENST00000546304 CBLN1P23435 193 aa4.78□□□□□ -1.64
PRKDC-211ENST00000546304 GATA2P23769 480 aaPredicted RBP4.78□□□□□ -1.64
PRKDC-211ENST00000546304 BMI1P35226 326 aa4.78□□□□□ -1.64
PRKDC-211ENST00000546304 CAMLGP49069 296 aa4.78□□□□□ -1.64
PRKDC-211ENST00000546304 SELENOTP62341 195 aa4.78□□□□□ -1.64
PRKDC-211ENST00000546304 RAB31Q13636 194 aa4.78□□□□□ -1.64
PRKDC-211ENST00000546304 ZNF266Q14584 549 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms