RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 GDF5OSQ5U4N7 250 aa16.41■□□□□ 0.22
CHD4-214ENST00000545942 TRIQKQ629K1 86 aa16.41■□□□□ 0.22
CHD4-214ENST00000545942 FOXI2Q6ZQN5 318 aa16.41■□□□□ 0.22
CHD4-214ENST00000545942 Q6ZTC4 211 aa16.41■□□□□ 0.22
CHD4-214ENST00000545942 SAV1Q9H4B6 383 aaPredicted RBP16.41■□□□□ 0.22
CHD4-214ENST00000545942 TRAV10A0A0B4J240 114 aa16.4■□□□□ 0.22
CHD4-214ENST00000545942 C9orf170A2RU37 121 aa16.4■□□□□ 0.22
CHD4-214ENST00000545942 NDUFB6O95139 128 aa16.4■□□□□ 0.22
CHD4-214ENST00000545942 BAK1Q16611 211 aa16.4■□□□□ 0.22
CHD4-214ENST00000545942 SAMD13Q5VXD3 122 aa16.4■□□□□ 0.22
CHD4-214ENST00000545942 SLC45A2Q9UMX9 530 aa16.4■□□□□ 0.22
CHD4-214ENST00000545942 STRAPQ9Y3F4 350 aaKnown RBP16.4■□□□□ 0.22
CHD4-214ENST00000545942 ISLRO14498 428 aa16.39■□□□□ 0.21
CHD4-214ENST00000545942 ADAP1O75689 374 aa16.39■□□□□ 0.21
CHD4-214ENST00000545942 DEFB1P60022 68 aa16.39■□□□□ 0.21
CHD4-214ENST00000545942 ID3Q02535 119 aa16.39■□□□□ 0.21
CHD4-214ENST00000545942 APLNQ9ULZ1 77 aa16.39■□□□□ 0.21
CHD4-214ENST00000545942 CELA1Q9UNI1 258 aa16.39■□□□□ 0.21
CHD4-214ENST00000545942 H3BP45 60 aa16.38■□□□□ 0.21
CHD4-214ENST00000545942 IGKV3-20P01619 116 aa16.38■□□□□ 0.21
CHD4-214ENST00000545942 MEOX2P50222 304 aa16.38■□□□□ 0.21
CHD4-214ENST00000545942 AKR1C1Q04828 323 aa16.38■□□□□ 0.21
CHD4-214ENST00000545942 SPATA31B1PQ5VZV4 182 aa16.38■□□□□ 0.21
CHD4-214ENST00000545942 BPIFCQ8NFQ6 507 aa16.38■□□□□ 0.21
CHD4-214ENST00000545942 CLUHP3Q96NS8 147 aa16.38■□□□□ 0.21
CHD4-214ENST00000545942 GALR1P47211 349 aa16.37■□□□□ 0.21
CHD4-214ENST00000545942 ZNF705AQ6ZN79 300 aaPredicted RBP16.37■□□□□ 0.21
CHD4-214ENST00000545942 ACOT7LQ6ZUV0 252 aa16.37■□□□□ 0.21
CHD4-214ENST00000545942 NEU1Q99519 415 aa16.37■□□□□ 0.21
CHD4-214ENST00000545942 FLVCR2Q9UPI3 526 aa16.37■□□□□ 0.21
CHD4-214ENST00000545942 IFNA21P01568 189 aa16.36■□□□□ 0.21
CHD4-214ENST00000545942 OR4E1P0C645 316 aa16.36■□□□□ 0.21
CHD4-214ENST00000545942 ORM2P19652 201 aa16.36■□□□□ 0.21
CHD4-214ENST00000545942 POLR2GP62487 172 aaKnown RBP eCLIP16.36■□□□□ 0.21
CHD4-214ENST00000545942 PRR20EP86478 221 aa16.36■□□□□ 0.21
CHD4-214ENST00000545942 PRR20CP86479 221 aa16.36■□□□□ 0.21
CHD4-214ENST00000545942 PRR20DP86480 221 aa16.36■□□□□ 0.21
CHD4-214ENST00000545942 PRR20BP86481 221 aa16.36■□□□□ 0.21
CHD4-214ENST00000545942 PRR20AP86496 221 aa16.36■□□□□ 0.21
CHD4-214ENST00000545942 OR4B1Q8NGF8 309 aa16.36■□□□□ 0.21
CHD4-214ENST00000545942 SLC25A32Q9H2D1 315 aa16.36■□□□□ 0.21
CHD4-214ENST00000545942 SLC25A22Q9H936 323 aa16.36■□□□□ 0.21
CHD4-214ENST00000545942 ZNF98A6NK75 572 aa16.35■□□□□ 0.21
CHD4-214ENST00000545942 ZNF705FA8MVS1 300 aaPredicted RBP16.35■□□□□ 0.21
CHD4-214ENST00000545942 ZNF705DP0CH99 300 aaPredicted RBP16.35■□□□□ 0.21
CHD4-214ENST00000545942 ZNF705BP0CI00 300 aaPredicted RBP16.35■□□□□ 0.21
CHD4-214ENST00000545942 GATA2P23769 480 aaPredicted RBP16.35■□□□□ 0.21
CHD4-214ENST00000545942 S100A7P31151 101 aa16.35■□□□□ 0.21
CHD4-214ENST00000545942 FXYD7P58549 80 aa16.35■□□□□ 0.21
CHD4-214ENST00000545942 C12orf74Q32Q52 190 aa16.35■□□□□ 0.21
CHD4-214ENST00000545942 EBLN2Q6P2I7 272 aa16.35■□□□□ 0.21
CHD4-214ENST00000545942 GSG1LQ6UXU4 331 aa16.35■□□□□ 0.21
CHD4-214ENST00000545942 TMEM144Q7Z5S9 345 aa16.35■□□□□ 0.21
CHD4-214ENST00000545942 ZNF709Q8N972 641 aa16.35■□□□□ 0.21
CHD4-214ENST00000545942 OR4D5Q8NGN0 318 aa16.35■□□□□ 0.21
CHD4-214ENST00000545942 C16orf92Q96LL3 132 aa16.35■□□□□ 0.21
CHD4-214ENST00000545942 TMEM147Q9BVK8 224 aa16.35■□□□□ 0.21
CHD4-214ENST00000545942 IGHV4-4A0A075B6R2 117 aa16.34■□□□□ 0.21
CHD4-214ENST00000545942 LINC00854A0A1B0GVQ3 168 aa16.34■□□□□ 0.21
CHD4-214ENST00000545942 SMIM9A6NGZ8 99 aa16.34■□□□□ 0.21
CHD4-214ENST00000545942 CENPXA8MT69 81 aa16.34■□□□□ 0.21
CHD4-214ENST00000545942 PAX9P55771 341 aa16.34■□□□□ 0.21
CHD4-214ENST00000545942 TMEM182Q6ZP80 229 aaPredicted RBP16.34■□□□□ 0.21
CHD4-214ENST00000545942 RNF126Q9BV68 326 aa16.34■□□□□ 0.21
CHD4-214ENST00000545942 RPRMQ9NS64 109 aa16.34■□□□□ 0.21
CHD4-214ENST00000545942 PSENENQ9NZ42 101 aa16.34■□□□□ 0.21
CHD4-214ENST00000545942 SMCO3A2RU48 225 aa16.33■□□□□ 0.2
CHD4-214ENST00000545942 TMEM189A5PLL7 270 aa16.33■□□□□ 0.2
CHD4-214ENST00000545942 C4orf46Q504U0 113 aa16.33■□□□□ 0.2
CHD4-214ENST00000545942 FAM78BQ5VT40 261 aa16.33■□□□□ 0.2
CHD4-214ENST00000545942 ZNF767PQ75MW2 155 aa16.33■□□□□ 0.2
CHD4-214ENST00000545942 OR1B1Q8NGR6 318 aa16.33■□□□□ 0.2
CHD4-214ENST00000545942 GPR82Q96P67 336 aa16.33■□□□□ 0.2
CHD4-214ENST00000545942 SDHCQ99643 169 aaPredicted RBP16.33■□□□□ 0.2
CHD4-214ENST00000545942 C7orf50Q9BRJ6 194 aaKnown RBP16.33■□□□□ 0.2
CHD4-214ENST00000545942 RSG1Q9BU20 258 aa16.33■□□□□ 0.2
CHD4-214ENST00000545942 IGHV3OR16-12A0A075B7B8 117 aa16.32■□□□□ 0.2
CHD4-214ENST00000545942 DEFB131BA0A096LNP1 70 aa16.32■□□□□ 0.2
CHD4-214ENST00000545942 A0A0J9YX75 114 aa16.32■□□□□ 0.2
CHD4-214ENST00000545942 F6UB75 175 aa16.32■□□□□ 0.2
CHD4-214ENST00000545942 SSSCA1O60232 199 aa16.32■□□□□ 0.2
CHD4-214ENST00000545942 ANXA7P20073 488 aaKnown RBP16.32■□□□□ 0.2
CHD4-214ENST00000545942 PSG9Q00887 426 aa16.32■□□□□ 0.2
CHD4-214ENST00000545942 SMIM8Q96KF7 97 aa16.32■□□□□ 0.2
CHD4-214ENST00000545942 SLC35B3Q9H1N7 401 aa16.32■□□□□ 0.2
CHD4-214ENST00000545942 FRAS1Q86XX4 4008 aa16.32■□□□□ 0.2
CHD4-214ENST00000545942 IL5P05113 134 aa16.31■□□□□ 0.2
CHD4-214ENST00000545942 BTCP35070 178 aa16.31■□□□□ 0.2
CHD4-214ENST00000545942 CYP2G1PQ6ZSU1 146 aa16.31■□□□□ 0.2
CHD4-214ENST00000545942 C20orf173Q96LM9 149 aa16.31■□□□□ 0.2
CHD4-214ENST00000545942 C17orf77Q96MU5 243 aa16.31■□□□□ 0.2
CHD4-214ENST00000545942 RFNGQ9Y644 331 aa16.31■□□□□ 0.2
CHD4-214ENST00000545942 PMS2P5A8MQ11 134 aa16.3■□□□□ 0.2
CHD4-214ENST00000545942 SPART-AS1P0CW21 52 aa16.3■□□□□ 0.2
CHD4-214ENST00000545942 EMP1P54849 157 aa16.3■□□□□ 0.2
CHD4-214ENST00000545942 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.3■□□□□ 0.2
CHD4-214ENST00000545942 DOK5Q9P104 306 aa16.3■□□□□ 0.2
CHD4-214ENST00000545942 AMBPP02760 352 aa16.29■□□□□ 0.2
CHD4-214ENST00000545942 IL7P13232 177 aa16.29■□□□□ 0.2
CHD4-214ENST00000545942 IAH1Q2TAA2 248 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms