RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 TMEM191AQ9H0A3 160 aa7.11□□□□□ -1.27
CLIP1-218ENST00000545889 OOSP1A8MZH6 123 aa7.1□□□□□ -1.27
CLIP1-218ENST00000545889 RPL35AP18077 110 aaKnown RBP7.1□□□□□ -1.27
CLIP1-218ENST00000545889 ZNF474Q6S9Z5 364 aaPredicted RBP7.1□□□□□ -1.27
CLIP1-218ENST00000545889 GLMPQ8WWB7 406 aa7.1□□□□□ -1.27
CLIP1-218ENST00000545889 TRBV5-7A0A0A0MS05 114 aa7.1□□□□□ -1.27
CLIP1-218ENST00000545889 TMEM178BH3BS89 294 aa7.1□□□□□ -1.27
CLIP1-218ENST00000545889 NUDT3O95989 172 aa7.1□□□□□ -1.27
CLIP1-218ENST00000545889 RNASE1P07998 156 aaKnown RBP7.1□□□□□ -1.27
CLIP1-218ENST00000545889 ASIPP42127 132 aa7.1□□□□□ -1.27
CLIP1-218ENST00000545889 PAX8Q06710 450 aa7.1□□□□□ -1.27
CLIP1-218ENST00000545889 NEUROG1Q92886 237 aa7.1□□□□□ -1.27
CLIP1-218ENST00000545889 MRAP2Q96G30 205 aa7.1□□□□□ -1.27
CLIP1-218ENST00000545889 IFI27L2Q9H2X8 130 aa7.1□□□□□ -1.27
CLIP1-218ENST00000545889 CIRBPQ14011 172 aaKnown RBP7.1□□□□□ -1.27
CLIP1-218ENST00000545889 LINC00305Q7Z4B0 112 aa7.1□□□□□ -1.27
CLIP1-218ENST00000545889 OR9G4Q8NGQ1 327 aa7.1□□□□□ -1.27
CLIP1-218ENST00000545889 TMEM170AQ8WVE7 144 aa7.1□□□□□ -1.27
CLIP1-218ENST00000545889 C19orf24Q9BVV8 132 aa7.1□□□□□ -1.27
CLIP1-218ENST00000545889 KLK15Q9H2R5 256 aa7.1□□□□□ -1.27
CLIP1-218ENST00000545889 TOMM7Q9P0U1 55 aa7.1□□□□□ -1.27
CLIP1-218ENST00000545889 PKD1L2Q7Z442 2459 aa7.1□□□□□ -1.27
CLIP1-218ENST00000545889 WFDC12Q8WWY7 111 aa7.1□□□□□ -1.27
CLIP1-218ENST00000545889 TAF15Q92804 592 aaKnown RBP eCLIP7.1□□□□□ -1.27
CLIP1-218ENST00000545889 IMMP2LQ96T52 175 aa7.1□□□□□ -1.27
CLIP1-218ENST00000545889 TNRC6AQ8NDV7 1962 aaKnown RBP7.09□□□□□ -1.27
CLIP1-218ENST00000545889 TRAV24A0A0B4J272 114 aa7.09□□□□□ -1.27
CLIP1-218ENST00000545889 NBEAP1P0C6P0 100 aa7.09□□□□□ -1.27
CLIP1-218ENST00000545889 BCL2P10415 239 aa7.09□□□□□ -1.27
CLIP1-218ENST00000545889 ADIPOQQ15848 244 aa7.09□□□□□ -1.27
CLIP1-218ENST00000545889 TRBV24-1A0A075B6N3 115 aa7.09□□□□□ -1.27
CLIP1-218ENST00000545889 OR11H12B2RN74 326 aa7.09□□□□□ -1.27
CLIP1-218ENST00000545889 OTX1P32242 354 aaPredicted RBP7.09□□□□□ -1.27
CLIP1-218ENST00000545889 CKS1BP61024 79 aa7.09□□□□□ -1.27
CLIP1-218ENST00000545889 ZNF818PQ6ZRF7 136 aa7.09□□□□□ -1.27
CLIP1-218ENST00000545889 OR13C6PQ8NH95 151 aa7.09□□□□□ -1.27
CLIP1-218ENST00000545889 GPR132Q9UNW8 380 aa7.09□□□□□ -1.27
CLIP1-218ENST00000545889 COL8A2P25067 703 aa7.09□□□□□ -1.27
CLIP1-218ENST00000545889 IER3P46695 156 aa7.09□□□□□ -1.27
CLIP1-218ENST00000545889 TXNDC17Q9BRA2 123 aa7.09□□□□□ -1.27
CLIP1-218ENST00000545889 SRRM5B3KS81 715 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 SERF1AO75920 110 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 PSMG4Q5JS54 123 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 IGFL2Q6UWQ7 119 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 TCF23Q7RTU1 214 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 LYZL4Q96KX0 146 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 C1QTNF4Q9BXJ3 329 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 MED12LQ86YW9 2145 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 IGHV2-26A0A0B4J1V2 119 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 E7EQL1 145 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 SAA1P0DJI8 122 aaPredicted RBP7.08□□□□□ -1.28
CLIP1-218ENST00000545889 CYP2G1PQ6ZSU1 146 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 TCF24Q7RTU0 167 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 RAB37Q96AX2 223 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 ANAPC16Q96DE5 110 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 MAP1LC3CQ9BXW4 147 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 FAM215AQ9Y5M1 114 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 C17orf98A8MV24 154 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 RRHO14718 337 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 YPEL1O60688 119 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 NDUFB4O95168 129 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 CD7P09564 240 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 MALP21145 153 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 RNASE4P34096 147 aaKnown RBP7.08□□□□□ -1.28
CLIP1-218ENST00000545889 KIAA1644Q3SXP7 199 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 IBA57Q5T440 356 aaKnown RBP7.08□□□□□ -1.28
CLIP1-218ENST00000545889 YPEL2Q96QA6 119 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 CITED1Q99966 193 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 ZMAT4Q9H898 229 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 SAA2-SAA4A0A096LPE2 208 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 TRBV6-7A0A0A0MS04 114 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 TMEM14DPA8MWL7 114 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 SAA2P0DJI9 122 aaPredicted RBP7.08□□□□□ -1.28
CLIP1-218ENST00000545889 C20orf144Q9BQM9 153 aa7.08□□□□□ -1.28
CLIP1-218ENST00000545889 MRPL32Q9BYC8 188 aaKnown RBP7.08□□□□□ -1.28
CLIP1-218ENST00000545889 FNDC4Q9H6D8 234 aaPredicted RBP7.08□□□□□ -1.28
CLIP1-218ENST00000545889 KIR2DL5BA0A0G2JN68 375 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 KIR2DL5BA0A0G2JPC4 375 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 PITX3O75364 302 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 CBLN1P23435 193 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 MUC21Q5SSG8 566 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 KIR2DL5AQ8N109 375 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 TEX45Q8NA69 505 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 OR5AN1Q8NGI8 311 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 NAA38Q9BRA0 125 aaKnown RBP7.07□□□□□ -1.28
CLIP1-218ENST00000545889 CHCHD5Q9BSY4 110 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 SDF2L1Q9HCN8 221 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 M0R1W7 72 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 TFF1P04155 84 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 SAA4P35542 130 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 ZNF506Q5JVG8 444 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 KCNS1Q96KK3 526 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 SIGMAR1Q99720 223 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 MCRIP2Q9BUT9 160 aaKnown RBP7.07□□□□□ -1.28
CLIP1-218ENST00000545889 WFDC1Q9HC57 220 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 PNRC2Q9NPJ4 139 aaKnown RBP7.07□□□□□ -1.28
CLIP1-218ENST00000545889 IGHV1-8P0DP01 117 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 MRPL52Q86TS9 123 aaKnown RBP7.07□□□□□ -1.28
CLIP1-218ENST00000545889 H1FOOQ8IZA3 346 aaPredicted RBP7.07□□□□□ -1.28
CLIP1-218ENST00000545889 OR4D5Q8NGN0 318 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms