RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 ZNF492Q9P255 531 aa12.17□□□□□ -0.46
CNN3-207ENST00000545882 CD24P25063 80 aa12.17□□□□□ -0.46
CNN3-207ENST00000545882 Q71RC1 249 aaPredicted RBP12.17□□□□□ -0.46
CNN3-207ENST00000545882 FMC1Q96HJ9 113 aa12.17□□□□□ -0.46
CNN3-207ENST00000545882 IGHV2-26A0A0B4J1V2 119 aa12.16□□□□□ -0.46
CNN3-207ENST00000545882 M0R2Z0 102 aa12.16□□□□□ -0.46
CNN3-207ENST00000545882 FAM120AOSQ5T036 256 aa12.16□□□□□ -0.46
CNN3-207ENST00000545882 RNASEKQ6P5S7 137 aaKnown RBP12.16□□□□□ -0.46
CNN3-207ENST00000545882 SSX8Q7RTT4 187 aa12.16□□□□□ -0.46
CNN3-207ENST00000545882 OR2D3Q8NGH3 330 aa12.16□□□□□ -0.46
CNN3-207ENST00000545882 F11RQ9Y624 299 aaKnown RBP12.16□□□□□ -0.46
CNN3-207ENST00000545882 IGHV1-3A0A0C4DH29 117 aa12.15□□□□□ -0.46
CNN3-207ENST00000545882 HBBP68871 147 aa12.15□□□□□ -0.46
CNN3-207ENST00000545882 CT83Q5H943 113 aa12.15□□□□□ -0.46
CNN3-207ENST00000545882 CYB5R2Q6BCY4 276 aa12.15□□□□□ -0.46
CNN3-207ENST00000545882 STPG4Q8N801 248 aa12.15□□□□□ -0.46
CNN3-207ENST00000545882 DYNLRB1Q9NP97 96 aa12.15□□□□□ -0.46
CNN3-207ENST00000545882 GOLT1BQ9Y3E0 138 aa12.15□□□□□ -0.46
CNN3-207ENST00000545882 DCHS1Q96JQ0 3298 aa12.15□□□□□ -0.46
CNN3-207ENST00000545882 ABCA1O95477 2261 aa12.15□□□□□ -0.46
CNN3-207ENST00000545882 POLEQ07864 2286 aa12.15□□□□□ -0.46
CNN3-207ENST00000545882 IGHV1-69-2A0A0G2JMI3 117 aa12.15□□□□□ -0.46
CNN3-207ENST00000545882 OVOL3O00110 214 aa12.15□□□□□ -0.46
CNN3-207ENST00000545882 PSG1P11464 419 aa12.15□□□□□ -0.46
CNN3-207ENST00000545882 COL5A1-AS1Q5SY13 56 aa12.15□□□□□ -0.46
CNN3-207ENST00000545882 GFRALQ6UXV0 394 aa12.15□□□□□ -0.46
CNN3-207ENST00000545882 Q6ZN92 141 aa12.15□□□□□ -0.46
CNN3-207ENST00000545882 C22orf15Q8WYQ4 148 aa12.15□□□□□ -0.46
CNN3-207ENST00000545882 TNFRSF14Q92956 283 aa12.15□□□□□ -0.46
CNN3-207ENST00000545882 SH2D7A6NKC9 451 aaPredicted RBP12.14□□□□□ -0.47
CNN3-207ENST00000545882 A8MWL6 223 aa12.14□□□□□ -0.47
CNN3-207ENST00000545882 NDUFB8O95169 186 aa12.14□□□□□ -0.47
CNN3-207ENST00000545882 IGLV2-11P01706 119 aa12.14□□□□□ -0.47
CNN3-207ENST00000545882 IGLC1P0CG04 106 aa12.14□□□□□ -0.47
CNN3-207ENST00000545882 BTF3P20290 206 aaKnown RBP12.14□□□□□ -0.47
CNN3-207ENST00000545882 PMCHL1Q16048 86 aa12.14□□□□□ -0.47
CNN3-207ENST00000545882 PPP1R27Q86WC6 154 aa12.14□□□□□ -0.47
CNN3-207ENST00000545882 PGLYRP4Q96LB8 373 aa12.14□□□□□ -0.47
CNN3-207ENST00000545882 TXN2Q99757 166 aa12.14□□□□□ -0.47
CNN3-207ENST00000545882 HIGD1AQ9Y241 93 aa12.14□□□□□ -0.47
CNN3-207ENST00000545882 TRAV8-1A0A0A6YYK1 113 aa12.13□□□□□ -0.47
CNN3-207ENST00000545882 ZNF785A8K8V0 405 aa12.13□□□□□ -0.47
CNN3-207ENST00000545882 VSTM5A8MXK1 200 aa12.13□□□□□ -0.47
CNN3-207ENST00000545882 LYNX1G3V0Z9 82 aa12.13□□□□□ -0.47
CNN3-207ENST00000545882 BUB1B-PAK6H3BSN5 160 aa12.13□□□□□ -0.47
CNN3-207ENST00000545882 I3L2K1 104 aa12.13□□□□□ -0.47
CNN3-207ENST00000545882 M0QZ24 198 aa12.13□□□□□ -0.47
CNN3-207ENST00000545882 P01737 135 aa12.13□□□□□ -0.47
CNN3-207ENST00000545882 LYNX1P0DP58 116 aa12.13□□□□□ -0.47
CNN3-207ENST00000545882 HNRNPA3P51991 378 aaKnown RBP12.13□□□□□ -0.47
CNN3-207ENST00000545882 FBXL15Q9H469 300 aa12.13□□□□□ -0.47
CNN3-207ENST00000545882 RALYQ9UKM9 306 aaKnown RBP12.13□□□□□ -0.47
CNN3-207ENST00000545882 LAMTOR2Q9Y2Q5 125 aa12.13□□□□□ -0.47
CNN3-207ENST00000545882 INSIG2Q9Y5U4 225 aa12.13□□□□□ -0.47
CNN3-207ENST00000545882 DMXL2Q8TDJ6 3036 aa12.13□□□□□ -0.47
CNN3-207ENST00000545882 NPIPB6E9PJ23 425 aa12.13□□□□□ -0.47
CNN3-207ENST00000545882 K7ENP7 123 aa12.13□□□□□ -0.47
CNN3-207ENST00000545882 HOXB4P17483 251 aaPredicted RBP12.13□□□□□ -0.47
CNN3-207ENST00000545882 FOXA3P55318 350 aaPredicted RBP12.13□□□□□ -0.47
CNN3-207ENST00000545882 PRR30Q53SZ7 412 aaPredicted RBP12.13□□□□□ -0.47
CNN3-207ENST00000545882 Q56UQ5 140 aa12.13□□□□□ -0.47
CNN3-207ENST00000545882 Q86TA4 180 aa12.13□□□□□ -0.47
CNN3-207ENST00000545882 CIARTQ8N365 385 aaPredicted RBP12.13□□□□□ -0.47
CNN3-207ENST00000545882 KLHDC1Q8N7A1 406 aa12.13□□□□□ -0.47
CNN3-207ENST00000545882 SLC25A39Q9BZJ4 359 aaPredicted RBP12.13□□□□□ -0.47
CNN3-207ENST00000545882 GFRA4Q9GZZ7 299 aa12.13□□□□□ -0.47
CNN3-207ENST00000545882 CLEC5AQ9NY25 188 aa12.13□□□□□ -0.47
CNN3-207ENST00000545882 APC2O95996 2303 aa12.12□□□□□ -0.47
CNN3-207ENST00000545882 TRAV9-2A0A087WT02 112 aa12.12□□□□□ -0.47
CNN3-207ENST00000545882 LYZP61626 148 aa12.12□□□□□ -0.47
CNN3-207ENST00000545882 C16orf54Q6UWD8 224 aa12.12□□□□□ -0.47
CNN3-207ENST00000545882 EXOC3-AS1Q8N2X6 119 aa12.12□□□□□ -0.47
CNN3-207ENST00000545882 OTORQ9NRC9 128 aa12.12□□□□□ -0.47
CNN3-207ENST00000545882 TMEM14CQ9P0S9 112 aa12.12□□□□□ -0.47
CNN3-207ENST00000545882 SOX21Q9Y651 276 aaPredicted RBP12.12□□□□□ -0.47
CNN3-207ENST00000545882 ACACAQ13085 2346 aa12.12□□□□□ -0.47
CNN3-207ENST00000545882 APOHP02749 345 aaPredicted RBP12.11□□□□□ -0.47
CNN3-207ENST00000545882 IGLL1P15814 213 aa12.11□□□□□ -0.47
CNN3-207ENST00000545882 TSPOP30536 169 aa12.11□□□□□ -0.47
CNN3-207ENST00000545882 RBPMS2Q6ZRY4 209 aaKnown RBP12.11□□□□□ -0.47
CNN3-207ENST00000545882 SRSF12Q8WXF0 261 aaKnown RBP12.11□□□□□ -0.47
CNN3-207ENST00000545882 ZFP30Q9Y2G7 519 aa12.11□□□□□ -0.47
CNN3-207ENST00000545882 MAP1BP46821 2468 aaKnown RBP12.11□□□□□ -0.47
CNN3-207ENST00000545882 APOBEC3AP31941 199 aaPredicted RBP12.11□□□□□ -0.47
CNN3-207ENST00000545882 RBPJQ06330 500 aa12.11□□□□□ -0.47
CNN3-207ENST00000545882 FOXC1Q12948 553 aa12.11□□□□□ -0.47
CNN3-207ENST00000545882 LDLRAD2Q5SZI1 272 aa12.11□□□□□ -0.47
CNN3-207ENST00000545882 LINC00173Q6ZV60 143 aa12.11□□□□□ -0.47
CNN3-207ENST00000545882 LY6LH3BQJ8 138 aa12.1□□□□□ -0.47
CNN3-207ENST00000545882 KALRNO60229 2985 aa12.1□□□□□ -0.47
CNN3-207ENST00000545882 IGKV1-17P01599 117 aa12.1□□□□□ -0.47
CNN3-207ENST00000545882 COX7A1P24310 79 aa12.1□□□□□ -0.47
CNN3-207ENST00000545882 RBM14Q96PK6 669 aaKnown RBP12.1□□□□□ -0.47
CNN3-207ENST00000545882 MRPS16Q9Y3D3 137 aaKnown RBP12.1□□□□□ -0.47
CNN3-207ENST00000545882 LOC102724200A0A096LPH7 203 aaPredicted RBP12.09□□□□□ -0.47
CNN3-207ENST00000545882 IGHV1-24A0A0C4DH33 117 aa12.09□□□□□ -0.47
CNN3-207ENST00000545882 FAM231BA6NCW3 169 aa12.09□□□□□ -0.47
CNN3-207ENST00000545882 LINC00614P0C842 121 aa12.09□□□□□ -0.47
CNN3-207ENST00000545882 GOLT1AQ6ZVE7 132 aa12.09□□□□□ -0.47
CNN3-207ENST00000545882 DAZAP1Q96EP5 407 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms