RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 NDUFB3O43676 98 aa7□□□□□ -1.29
TDP1-204ENST00000545686 WT1P19544 449 aaPredicted RBP7□□□□□ -1.29
TDP1-204ENST00000545686 COL8A1P27658 744 aa7□□□□□ -1.29
TDP1-204ENST00000545686 RPL27AP46776 148 aaKnown RBP7□□□□□ -1.29
TDP1-204ENST00000545686 ANKRD39Q53RE8 183 aa7□□□□□ -1.29
TDP1-204ENST00000545686 MPV17L2Q567V2 206 aa7□□□□□ -1.29
TDP1-204ENST00000545686 Q6ZVH6 145 aa7□□□□□ -1.29
TDP1-204ENST00000545686 H1FXQ92522 213 aaKnown RBP7□□□□□ -1.29
TDP1-204ENST00000545686 PMCHL2Q9BQD1 86 aa7□□□□□ -1.29
TDP1-204ENST00000545686 GSX1Q9H4S2 264 aaPredicted RBP7□□□□□ -1.29
TDP1-204ENST00000545686 HIGD1AQ9Y241 93 aa7□□□□□ -1.29
TDP1-204ENST00000545686 MALRD1Q5VYJ5 2156 aa6.99□□□□□ -1.29
TDP1-204ENST00000545686 PPIAL4EA0A075B759 164 aa6.99□□□□□ -1.29
TDP1-204ENST00000545686 PPIAL4DF5H284 164 aa6.99□□□□□ -1.29
TDP1-204ENST00000545686 FCN3O75636 299 aa6.99□□□□□ -1.29
TDP1-204ENST00000545686 PPIAL4FP0DN26 164 aa6.99□□□□□ -1.29
TDP1-204ENST00000545686 CEACAM8P31997 349 aaPredicted RBP6.99□□□□□ -1.29
TDP1-204ENST00000545686 DLX6P56179 175 aa6.99□□□□□ -1.29
TDP1-204ENST00000545686 CCL8P80075 99 aa6.99□□□□□ -1.29
TDP1-204ENST00000545686 HIST1H1AQ02539 215 aaPredicted RBP6.99□□□□□ -1.29
TDP1-204ENST00000545686 DIAPH2-AS1Q14236 149 aa6.99□□□□□ -1.29
TDP1-204ENST00000545686 VAMP3Q15836 100 aa6.99□□□□□ -1.29
TDP1-204ENST00000545686 SAPCD1Q5SSQ6 148 aa6.99□□□□□ -1.29
TDP1-204ENST00000545686 LINC01545Q5VT33 79 aa6.99□□□□□ -1.29
TDP1-204ENST00000545686 TMEM108Q6UXF1 575 aa6.99□□□□□ -1.29
TDP1-204ENST00000545686 TNFRSF14Q92956 283 aa6.99□□□□□ -1.29
TDP1-204ENST00000545686 SGK494Q96LW2 274 aa6.99□□□□□ -1.29
TDP1-204ENST00000545686 TPSG1Q9NRR2 321 aa6.99□□□□□ -1.29
TDP1-204ENST00000545686 COL6A3P12111 3177 aa6.99□□□□□ -1.29
TDP1-204ENST00000545686 hDV102S1A0JD36 115 aa6.99□□□□□ -1.29
TDP1-204ENST00000545686 TMEM178BH3BS89 294 aa6.99□□□□□ -1.29
TDP1-204ENST00000545686 M0QZ24 198 aa6.99□□□□□ -1.29
TDP1-204ENST00000545686 TNFRSF13BO14836 293 aaPredicted RBP6.99□□□□□ -1.29
TDP1-204ENST00000545686 TAX1BP3O14907 124 aa6.99□□□□□ -1.29
TDP1-204ENST00000545686 CRYGBP07316 175 aa6.99□□□□□ -1.29
TDP1-204ENST00000545686 C21orf62-AS1Q17RA5 79 aa6.99□□□□□ -1.29
TDP1-204ENST00000545686 Q6AWC8 147 aa6.99□□□□□ -1.29
TDP1-204ENST00000545686 IGFL3Q6UXB1 125 aa6.99□□□□□ -1.29
TDP1-204ENST00000545686 LINC00173Q6ZV60 143 aa6.99□□□□□ -1.29
TDP1-204ENST00000545686 RNF24Q9Y225 148 aa6.99□□□□□ -1.29
TDP1-204ENST00000545686 A0A1B0GUT8 65 aa6.98□□□□□ -1.29
TDP1-204ENST00000545686 TOX4O94842 621 aa6.98□□□□□ -1.29
TDP1-204ENST00000545686 NUDT3O95989 172 aa6.98□□□□□ -1.29
TDP1-204ENST00000545686 IGLV2-11P01706 119 aa6.98□□□□□ -1.29
TDP1-204ENST00000545686 FAM87AP0C7U9 286 aa6.98□□□□□ -1.29
TDP1-204ENST00000545686 RIGQ13278 110 aa6.98□□□□□ -1.29
TDP1-204ENST00000545686 TMEM155Q4W5P6 130 aa6.98□□□□□ -1.29
TDP1-204ENST00000545686 TMEM75Q8N9X5 138 aa6.98□□□□□ -1.29
TDP1-204ENST00000545686 DPF1Q92782 380 aa6.98□□□□□ -1.29
TDP1-204ENST00000545686 KAAG1Q9UBP8 84 aa6.98□□□□□ -1.29
TDP1-204ENST00000545686 ZNF835Q9Y2P0 537 aa6.98□□□□□ -1.29
TDP1-204ENST00000545686 F11RQ9Y624 299 aaKnown RBP6.98□□□□□ -1.29
TDP1-204ENST00000545686 OVOL3O00110 214 aa6.98□□□□□ -1.29
TDP1-204ENST00000545686 CD5LO43866 347 aa6.98□□□□□ -1.29
TDP1-204ENST00000545686 PPBPP02775 128 aa6.98□□□□□ -1.29
TDP1-204ENST00000545686 HTR1DP28221 377 aa6.98□□□□□ -1.29
TDP1-204ENST00000545686 RBPJQ06330 500 aa6.98□□□□□ -1.29
TDP1-204ENST00000545686 ADIPOQQ15848 244 aa6.98□□□□□ -1.29
TDP1-204ENST00000545686 DEFB109BQ30KR1 87 aa6.98□□□□□ -1.29
TDP1-204ENST00000545686 RUSC1-AS1Q66K80 236 aa6.98□□□□□ -1.29
TDP1-204ENST00000545686 HCP5Q6MZN7 132 aa6.98□□□□□ -1.29
TDP1-204ENST00000545686 IGF2-ASQ6U949 168 aa6.98□□□□□ -1.29
TDP1-204ENST00000545686 RPRMLQ8N4K4 120 aa6.98□□□□□ -1.29
TDP1-204ENST00000545686 SPENQ96T58 3664 aaKnown RBP6.97□□□□□ -1.29
TDP1-204ENST00000545686 IGHV1-8P0DP01 117 aa6.97□□□□□ -1.29
TDP1-204ENST00000545686 LOXP28300 417 aaPredicted RBP6.97□□□□□ -1.29
TDP1-204ENST00000545686 CSN1S1P47710 185 aa6.97□□□□□ -1.29
TDP1-204ENST00000545686 FAM27E3Q08E93 113 aa6.97□□□□□ -1.29
TDP1-204ENST00000545686 PIP4P1Q86T03 277 aa6.97□□□□□ -1.29
TDP1-204ENST00000545686 LYPD1Q8N2G4 141 aa6.97□□□□□ -1.29
TDP1-204ENST00000545686 SRSF8Q9BRL6 282 aaKnown RBP6.97□□□□□ -1.29
TDP1-204ENST00000545686 SLC25A39Q9BZJ4 359 aaPredicted RBP6.97□□□□□ -1.29
TDP1-204ENST00000545686 AP5S1Q9NUS5 200 aa6.97□□□□□ -1.29
TDP1-204ENST00000545686 K7EQM0 130 aa6.96□□□□□ -1.29
TDP1-204ENST00000545686 IGLC1P0CG04 106 aa6.96□□□□□ -1.29
TDP1-204ENST00000545686 COX8AP10176 69 aa6.96□□□□□ -1.29
TDP1-204ENST00000545686 CIARTQ8N365 385 aaPredicted RBP6.96□□□□□ -1.29
TDP1-204ENST00000545686 ARL6IP6Q8N6S5 226 aa6.96□□□□□ -1.29
TDP1-204ENST00000545686 NEU4Q8WWR8 484 aaPredicted RBP6.96□□□□□ -1.29
TDP1-204ENST00000545686 TMEM133Q9H2Q1 129 aa6.96□□□□□ -1.29
TDP1-204ENST00000545686 COLQQ9Y215 455 aaPredicted RBP6.96□□□□□ -1.29
TDP1-204ENST00000545686 SIGLEC9Q9Y336 463 aa6.96□□□□□ -1.29
TDP1-204ENST00000545686 MUC3AQ02505 3323 aa6.96□□□□□ -1.3
TDP1-204ENST00000545686 MUC21A0A0G2JKD1 596 aa6.96□□□□□ -1.3
TDP1-204ENST00000545686 MUC21A0A140T8X8 626 aa6.96□□□□□ -1.3
TDP1-204ENST00000545686 CD24P25063 80 aa6.96□□□□□ -1.3
TDP1-204ENST00000545686 LYZP61626 148 aa6.96□□□□□ -1.3
TDP1-204ENST00000545686 MUC21Q5SSG8 566 aa6.96□□□□□ -1.3
TDP1-204ENST00000545686 Q6ZS92 163 aa6.96□□□□□ -1.3
TDP1-204ENST00000545686 C22orf34Q6ZV56 151 aa6.96□□□□□ -1.3
TDP1-204ENST00000545686 GOLT1AQ6ZVE7 132 aa6.96□□□□□ -1.3
TDP1-204ENST00000545686 PRNTQ86SH4 94 aa6.96□□□□□ -1.3
TDP1-204ENST00000545686 OR10AG1Q8NH19 301 aa6.96□□□□□ -1.3
TDP1-204ENST00000545686 RITA1Q96K30 269 aa6.96□□□□□ -1.3
TDP1-204ENST00000545686 TMUB1Q9BVT8 246 aa6.96□□□□□ -1.3
TDP1-204ENST00000545686 SCNM1Q9BWG6 230 aa6.96□□□□□ -1.3
TDP1-204ENST00000545686 LOC400499M0QZD8 3231 aa6.96□□□□□ -1.3
TDP1-204ENST00000545686 TRAV8-1A0A0A6YYK1 113 aa6.95□□□□□ -1.3
TDP1-204ENST00000545686 TEX22C9J3V5 150 aa6.95□□□□□ -1.3
TDP1-204ENST00000545686 ENSAO43768 121 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms