RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, human

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-223	ENST00000545215	DNAH5	Q8TE73	4624 aa		5.05	□□□□□ -1.6
LDHA-223	ENST00000545215	IGHV3-72	A0A0B4J1Y9	119 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	SERTM2	A0A1B0GWG4	89 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	PSMB11	A5LHX3	300 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	C5orf51	A6NDU8	294 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	NCBP2L	A6PVI3	153 aa	Known RBP	5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	OR2A4	O95047	310 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	IFNA21	P01568	189 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	HLA-A	P01891	365 aa	Known RBP	5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	PPBP	P02775	128 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	IGKV1-16	P04430	117 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	OR5AC1	P0C628	307 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	SLC25A6	P12236	298 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	HIST1H1B	P16401	226 aa	Known RBP	5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	ZNF25	P17030	456 aa	Predicted RBP	5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	VDAC1	P21796	283 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	MAS1L	P35410	378 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	LPAR6	P43657	344 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	AMT	P48728	403 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	DHRS2	Q13268	280 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	PLGLA	Q15195	96 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	PSG5	Q15238	335 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	C5orf64	Q2M2E5	130 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	AKIRIN2	Q53H80	203 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	MMD2	Q8IY49	270 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	C15orf54	Q8N8G6	183 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	TMEM167A	Q8TBQ9	72 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	MITD1	Q8WV92	249 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	LSM10	Q969L4	123 aa	Known RBP	5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	TMEM230	Q96A57	120 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	OR2A7	Q96R45	310 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	TP53RK	Q96S44	253 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	SPIN2A	Q99865	258 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	RASL11B	Q9BPW5	248 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	SPIN2B	Q9BPZ2	258 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	NDUFAF3	Q9BU61	184 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	FKBP11	Q9NYL4	201 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	ZNF580	Q9UK33	172 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	TMED3	Q9Y3Q3	217 aa		5.04	□□□□□ -1.6
LDHA-223	ENST00000545215	TMEM218	A2RU14	115 aa		5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	ST8SIA3	O43173	380 aa		5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	GAGE7	O76087	117 aa		5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	KBTBD11	O94819	623 aa		5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	HLA-DRB1	P01911	266 aa		5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	CSN3	P07498	182 aa		5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	GAGE12F	P0CL80	117 aa		5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	GAGE12G	P0CL81	117 aa		5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	GAGE12I	P0CL82	117 aa		5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	AKR1C2	P52895	323 aa		5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	BRWD1-AS2	P59051	145 aa		5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	SUPT4H1	P63272	117 aa	Known RBP	5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	FABP9	Q0Z7S8	132 aa		5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	GAGE4	Q13068	117 aa		5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	PPP1R1A	Q13522	171 aa		5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	TMEM187	Q14656	261 aa		5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	PEA15	Q15121	130 aa		5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	ZNF585B	Q52M93	769 aa		5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	ZNF562	Q6V9R5	426 aa		5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	H2BFWT	Q7Z2G1	175 aa		5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	ZNF329	Q86UD4	541 aa		5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	PPP1R27	Q86WC6	154 aa		5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	PUSL1	Q8N0Z8	303 aa	Known RBP	5.03	□□□□□ -1.6
LDHA-223	ENST00000545215		Q8N9W7	124 aa		5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	ADAD2	Q8NCV1	583 aa	Known RBP	5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	OR5B3	Q8NH48	314 aa		5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	SEC22A	Q96IW7	307 aa		5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	FAM210B	Q96KR6	192 aa		5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	SIGLEC8	Q9NYZ4	499 aa		5.03	□□□□□ -1.6
LDHA-223	ENST00000545215	PRND	Q9UKY0	176 aa		5.03	□□□□□ -1.6
LDHA-223	ENST00000545215		A0A1B0GU03	582 aa		5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	KRTAP9-7	A8MTY7	169 aa		5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	TMEM238	C9JI98	176 aa		5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	S1PR2	O95136	353 aa		5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	KRAS	P01116	189 aa		5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	IGLV2-23	P01705	113 aa		5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	NMB	P08949	121 aa		5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	SAA1	P0DJI8	122 aa	Predicted RBP	5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	RBX1	P62877	108 aa		5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	RPL8	P62917	257 aa	Known RBP	5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	EIF5A	P63241	154 aa	Known RBP	5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	SSBP2	P81877	361 aa	Predicted RBP	5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	EWSR1	Q01844	656 aa	Known RBP eCLIP	5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	TMEM267	Q0VDI3	215 aa	Predicted RBP	5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	OPCML	Q14982	345 aa		5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	PRSS8	Q16651	343 aa		5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	MORN5	Q5VZ52	161 aa		5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	SELENOH	Q8IZQ5	122 aa	Known RBP	5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	C5orf56	Q8N8D9	126 aa		5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	HSD17B11	Q8NBQ5	300 aa		5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	CASTOR1	Q8WTX7	329 aa		5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	ASB13	Q8WXK3	278 aa		5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	FRZB	Q92765	325 aa		5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	COMMD5	Q9GZQ3	224 aa		5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	FLVCR2	Q9UPI3	526 aa		5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	ZNF257	Q9Y2Q1	563 aa		5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	FBXO7	Q9Y3I1	522 aa		5.02	□□□□□ -1.61
LDHA-223	ENST00000545215	C7orf66	A4D0T2	115 aa		5.01	□□□□□ -1.61
LDHA-223	ENST00000545215	SRRM4	A7MD48	611 aa	Known RBP	5.01	□□□□□ -1.61
LDHA-223	ENST00000545215		M0R143	59 aa		5.01	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms