RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 ZNF524Q96C55 264 aa10.47□□□□□ -0.73
CHD4-211ENST00000544484 JMJD8Q96S16 334 aa10.47□□□□□ -0.73
CHD4-211ENST00000544484 AGMATQ9BSE5 352 aa10.47□□□□□ -0.73
CHD4-211ENST00000544484 B4DSR2 109 aa10.47□□□□□ -0.73
CHD4-211ENST00000544484 HIST1H2BKO60814 126 aa10.47□□□□□ -0.73
CHD4-211ENST00000544484 DNAL4O96015 105 aa10.47□□□□□ -0.73
CHD4-211ENST00000544484 HIST1H2BJP06899 126 aa10.47□□□□□ -0.73
CHD4-211ENST00000544484 HIST1H2BOP23527 126 aa10.47□□□□□ -0.73
CHD4-211ENST00000544484 HIST1H2BBP33778 126 aa10.47□□□□□ -0.73
CHD4-211ENST00000544484 HIST1H2BDP58876 126 aa10.47□□□□□ -0.73
CHD4-211ENST00000544484 HIST1H2BCP62807 126 aa10.47□□□□□ -0.73
CHD4-211ENST00000544484 HIST2H2BEQ16778 126 aa10.47□□□□□ -0.73
CHD4-211ENST00000544484 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.47□□□□□ -0.73
CHD4-211ENST00000544484 TMEM14EPQ6UXP3 125 aa10.47□□□□□ -0.73
CHD4-211ENST00000544484 HIST1H2BHQ93079 126 aa10.47□□□□□ -0.73
CHD4-211ENST00000544484 HIST1H2BNQ99877 126 aa10.47□□□□□ -0.73
CHD4-211ENST00000544484 HIST1H2BMQ99879 126 aa10.47□□□□□ -0.73
CHD4-211ENST00000544484 Q6ZRM9 215 aa10.47□□□□□ -0.73
CHD4-211ENST00000544484 ALKBH7Q9BT30 221 aaPredicted RBP10.47□□□□□ -0.73
CHD4-211ENST00000544484 DUSP14O95147 198 aaKnown RBP10.46□□□□□ -0.73
CHD4-211ENST00000544484 ZNF688P0C7X2 276 aa10.46□□□□□ -0.73
CHD4-211ENST00000544484 TDGF1P13385 188 aa10.46□□□□□ -0.73
CHD4-211ENST00000544484 SAMD13Q5VXD3 122 aa10.46□□□□□ -0.73
CHD4-211ENST00000544484 FOXL2NBQ6ZUU3 175 aa10.46□□□□□ -0.73
CHD4-211ENST00000544484 TICRRQ7Z2Z1 1910 aa10.46□□□□□ -0.73
CHD4-211ENST00000544484 C19orf67A6NJJ6 358 aa10.46□□□□□ -0.73
CHD4-211ENST00000544484 RSPO3Q9BXY4 272 aaPredicted RBP10.46□□□□□ -0.74
CHD4-211ENST00000544484 GSN-AS1Q9NRJ2 163 aa10.46□□□□□ -0.74
CHD4-211ENST00000544484 SIGLEC9Q9Y336 463 aa10.46□□□□□ -0.74
CHD4-211ENST00000544484 CD5P06127 495 aa10.46□□□□□ -0.74
CHD4-211ENST00000544484 CXCL1P09341 107 aa10.46□□□□□ -0.74
CHD4-211ENST00000544484 LINC00614P0C842 121 aa10.46□□□□□ -0.74
CHD4-211ENST00000544484 SFTA2Q6UW10 78 aa10.46□□□□□ -0.74
CHD4-211ENST00000544484 VCX2Q9H322 139 aa10.45□□□□□ -0.74
CHD4-211ENST00000544484 Q8TAT8 98 aa10.45□□□□□ -0.74
CHD4-211ENST00000544484 MSRB2Q9Y3D2 182 aa10.45□□□□□ -0.74
CHD4-211ENST00000544484 MINOS1Q5TGZ0 78 aa10.45□□□□□ -0.74
CHD4-211ENST00000544484 MAPK1IP1LQ8NDC0 245 aa10.45□□□□□ -0.74
CHD4-211ENST00000544484 TSKUQ8WUA8 353 aa10.45□□□□□ -0.74
CHD4-211ENST00000544484 MINOS1-NBL1R4GNA1 71 aa10.45□□□□□ -0.74
CHD4-211ENST00000544484 SAP30O75446 220 aa10.45□□□□□ -0.74
CHD4-211ENST00000544484 PROK2Q9HC23 129 aa10.45□□□□□ -0.74
CHD4-211ENST00000544484 TRGV4A0A0C4DH28 118 aa10.45□□□□□ -0.74
CHD4-211ENST00000544484 TRBV6-6A0A0A6YYG2 114 aa10.44□□□□□ -0.74
CHD4-211ENST00000544484 H3BRM9 83 aa10.44□□□□□ -0.74
CHD4-211ENST00000544484 NCR2O95944 276 aa10.44□□□□□ -0.74
CHD4-211ENST00000544484 DSCR9P59020 149 aa10.44□□□□□ -0.74
CHD4-211ENST00000544484 TRAV8-1A0A0A6YYK1 113 aa10.44□□□□□ -0.74
CHD4-211ENST00000544484 IFI27P40305 119 aaPredicted RBP10.44□□□□□ -0.74
CHD4-211ENST00000544484 IGHV3-73A0A0B4J1V6 119 aa10.44□□□□□ -0.74
CHD4-211ENST00000544484 C15orf62A8K5M9 175 aa10.44□□□□□ -0.74
CHD4-211ENST00000544484 FXYD7P58549 80 aa10.44□□□□□ -0.74
CHD4-211ENST00000544484 HELZP42694 1942 aaKnown RBP10.44□□□□□ -0.74
CHD4-211ENST00000544484 TYMSP04818 313 aa10.43□□□□□ -0.74
CHD4-211ENST00000544484 NIT1Q86X76 327 aa10.43□□□□□ -0.74
CHD4-211ENST00000544484 PEF1Q9UBV8 284 aaKnown RBP10.43□□□□□ -0.74
CHD4-211ENST00000544484 K7ENP7 123 aa10.43□□□□□ -0.74
CHD4-211ENST00000544484 HBDP02042 147 aa10.43□□□□□ -0.74
CHD4-211ENST00000544484 SAA4P35542 130 aa10.43□□□□□ -0.74
CHD4-211ENST00000544484 CACNG7P62955 275 aa10.43□□□□□ -0.74
CHD4-211ENST00000544484 IGKV1-6A0A0C4DH72 117 aa10.43□□□□□ -0.74
CHD4-211ENST00000544484 OVOL1O14753 267 aa10.43□□□□□ -0.74
CHD4-211ENST00000544484 MRPS16Q9Y3D3 137 aaKnown RBP10.43□□□□□ -0.74
CHD4-211ENST00000544484 NOTCH4Q99466 2003 aa10.43□□□□□ -0.74
CHD4-211ENST00000544484 MGAMO43451 1857 aa10.43□□□□□ -0.74
CHD4-211ENST00000544484 FOXL1Q12952 345 aa10.43□□□□□ -0.74
CHD4-211ENST00000544484 GLRX5Q86SX6 157 aa10.43□□□□□ -0.74
CHD4-211ENST00000544484 A0A0U1RRA0 63 aa10.43□□□□□ -0.74
CHD4-211ENST00000544484 SRSF1Q07955 248 aaKnown RBP eCLIP10.43□□□□□ -0.741e-7■□□□□ 10.9
CHD4-211ENST00000544484 TRGV9Q99603 122 aa10.43□□□□□ -0.74
CHD4-211ENST00000544484 LOC105371267A0A1B0GV96 52 aa10.42□□□□□ -0.74
CHD4-211ENST00000544484 M0R1W7 72 aa10.42□□□□□ -0.74
CHD4-211ENST00000544484 LINC01551Q86U37 167 aa10.42□□□□□ -0.74
CHD4-211ENST00000544484 TCRAP04437 139 aa10.42□□□□□ -0.74
CHD4-211ENST00000544484 CYB5R2Q6BCY4 276 aa10.42□□□□□ -0.74
CHD4-211ENST00000544484 SRRM4A7MD48 611 aaKnown RBP10.42□□□□□ -0.74
CHD4-211ENST00000544484 FCN3O75636 299 aa10.42□□□□□ -0.74
CHD4-211ENST00000544484 GNB1LQ9BYB4 327 aa10.42□□□□□ -0.74
CHD4-211ENST00000544484 CNTFRP26992 372 aa10.42□□□□□ -0.74
CHD4-211ENST00000544484 RIPPLY3P57055 190 aa10.42□□□□□ -0.74
CHD4-211ENST00000544484 RUSC1-AS1Q66K80 236 aa10.42□□□□□ -0.74
CHD4-211ENST00000544484 IGHV3-64A0A075B6Q5 118 aa10.42□□□□□ -0.74
CHD4-211ENST00000544484 OOSP1A8MZH6 123 aa10.42□□□□□ -0.74
CHD4-211ENST00000544484 CYSLTR1Q9Y271 337 aa10.42□□□□□ -0.74
CHD4-211ENST00000544484 FAM208BQ5VWN6 2430 aa10.42□□□□□ -0.74
CHD4-211ENST00000544484 WDR81Q562E7 1941 aa10.42□□□□□ -0.74
CHD4-211ENST00000544484 DUX4L9Q6RFH8 374 aaPredicted RBP10.42□□□□□ -0.74
CHD4-211ENST00000544484 RNF5Q99942 180 aa10.42□□□□□ -0.74
CHD4-211ENST00000544484 ZNF503-AS2A6NEH8 195 aa10.41□□□□□ -0.74
CHD4-211ENST00000544484 PIP4P2Q8N4L2 257 aa10.41□□□□□ -0.74
CHD4-211ENST00000544484 TRAV12-3A0A0B4J271 114 aa10.41□□□□□ -0.74
CHD4-211ENST00000544484 ASCL4Q6XD76 172 aa10.41□□□□□ -0.74
CHD4-211ENST00000544484 GTF3C1Q12789 2109 aa10.41□□□□□ -0.74
CHD4-211ENST00000544484 CFAP161Q6P656 301 aa10.41□□□□□ -0.74
CHD4-211ENST00000544484 GTSCR1Q86UQ5 136 aa10.41□□□□□ -0.74
CHD4-211ENST00000544484 RNASE2P10153 161 aaKnown RBP10.41□□□□□ -0.74
CHD4-211ENST00000544484 ZGRF1Q86YA3 2104 aa10.41□□□□□ -0.74
CHD4-211ENST00000544484 NXT2Q9NPJ8 142 aaKnown RBP10.41□□□□□ -0.74
CHD4-211ENST00000544484 LYZL1Q6UWQ5 148 aa10.41□□□□□ -0.74
CHD4-211ENST00000544484 Q6ZR03 302 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms