RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-223	ENST00000544268	UBE2G1	P62253	170 aa		12.07	□□□□□ -0.48
CHFR-223	ENST00000544268	ATP6V0B	Q99437	205 aa		12.07	□□□□□ -0.48
CHFR-223	ENST00000544268	NPVF	Q9HCQ7	196 aa		12.07	□□□□□ -0.48
CHFR-223	ENST00000544268	PPIAL4C	A0A0B4J2A2	164 aa		12.07	□□□□□ -0.48
CHFR-223	ENST00000544268	LYNX1	G3V0Z9	82 aa		12.07	□□□□□ -0.48
CHFR-223	ENST00000544268	GNG7	O60262	68 aa		12.07	□□□□□ -0.48
CHFR-223	ENST00000544268	APCS	P02743	223 aa		12.07	□□□□□ -0.48
CHFR-223	ENST00000544268	SAA1	P0DJI8	122 aa	Predicted RBP	12.07	□□□□□ -0.48
CHFR-223	ENST00000544268	LYNX1	P0DP58	116 aa		12.07	□□□□□ -0.48
CHFR-223	ENST00000544268	C10orf55	Q5SWW7	151 aa		12.07	□□□□□ -0.48
CHFR-223	ENST00000544268	TEPP	Q6URK8	271 aa		12.07	□□□□□ -0.48
CHFR-223	ENST00000544268	PET117	Q6UWS5	81 aa		12.07	□□□□□ -0.48
CHFR-223	ENST00000544268	C18orf32	Q8TCD1	76 aa		12.07	□□□□□ -0.48
CHFR-223	ENST00000544268	RPUSD1	Q9UJJ7	312 aa	Known RBP	12.07	□□□□□ -0.48
CHFR-223	ENST00000544268	GCHFR	P30047	84 aa		12.06	□□□□□ -0.48
CHFR-223	ENST00000544268	SSBP2	P81877	361 aa	Predicted RBP	12.06	□□□□□ -0.48
CHFR-223	ENST00000544268	TNXA	Q16473	311 aa		12.06	□□□□□ -0.48
CHFR-223	ENST00000544268	SLC25A48	Q6ZT89	311 aa	Known RBP	12.06	□□□□□ -0.48
CHFR-223	ENST00000544268	OR9G1	Q8NH87	305 aa		12.06	□□□□□ -0.48
CHFR-223	ENST00000544268	PGPEP1	Q9NXJ5	209 aa		12.06	□□□□□ -0.48
CHFR-223	ENST00000544268	TEX50	A0A1B0GTY4	177 aa		12.06	□□□□□ -0.48
CHFR-223	ENST00000544268	C2orf70	A6NJV1	201 aa		12.06	□□□□□ -0.48
CHFR-223	ENST00000544268	SAP30	O75446	220 aa		12.06	□□□□□ -0.48
CHFR-223	ENST00000544268	HSBP1	O75506	76 aa		12.06	□□□□□ -0.48
CHFR-223	ENST00000544268	IGLC1	P0CG04	106 aa		12.06	□□□□□ -0.48
CHFR-223	ENST00000544268	CEACAM3	P40198	252 aa		12.06	□□□□□ -0.48
CHFR-223	ENST00000544268	PAX2	Q02962	417 aa		12.06	□□□□□ -0.48
CHFR-223	ENST00000544268	OSTC	Q9NRP0	149 aa		12.06	□□□□□ -0.48
CHFR-223	ENST00000544268	SLC25A10	Q9UBX3	287 aa	Predicted RBP	12.06	□□□□□ -0.48
CHFR-223	ENST00000544268	MUC21	A0A0G2JKD1	596 aa		12.05	□□□□□ -0.48
CHFR-223	ENST00000544268	MUC21	A0A140T8X8	626 aa		12.05	□□□□□ -0.48
CHFR-223	ENST00000544268		G3V4G9	280 aa		12.05	□□□□□ -0.48
CHFR-223	ENST00000544268		M0R2Z0	102 aa		12.05	□□□□□ -0.48
CHFR-223	ENST00000544268	MPDU1	O75352	247 aa		12.05	□□□□□ -0.48
CHFR-223	ENST00000544268	PPOX	P50336	477 aa		12.05	□□□□□ -0.48
CHFR-223	ENST00000544268	MUC21	Q5SSG8	566 aa		12.05	□□□□□ -0.48
CHFR-223	ENST00000544268	MORN5	Q5VZ52	161 aa		12.05	□□□□□ -0.48
CHFR-223	ENST00000544268	C11orf71	Q6IPW1	123 aa		12.05	□□□□□ -0.48
CHFR-223	ENST00000544268	H1FX	Q92522	213 aa	Known RBP	12.05	□□□□□ -0.48
CHFR-223	ENST00000544268	RITA1	Q96K30	269 aa		12.05	□□□□□ -0.48
CHFR-223	ENST00000544268	ENY2	Q9NPA8	101 aa		12.05	□□□□□ -0.48
CHFR-223	ENST00000544268	PEF1	Q9UBV8	284 aa	Known RBP	12.05	□□□□□ -0.48
CHFR-223	ENST00000544268	ZFHX3	Q15911	3703 aa		12.05	□□□□□ -0.48
CHFR-223	ENST00000544268	KIR2DS2	P43631	304 aa		12.05	□□□□□ -0.48
CHFR-223	ENST00000544268	TMEM200B	Q69YZ2	307 aa		12.05	□□□□□ -0.48
CHFR-223	ENST00000544268	AKAP6	Q13023	2319 aa		12.04	□□□□□ -0.48
CHFR-223	ENST00000544268	UPK2	O00526	184 aa		12.04	□□□□□ -0.48
CHFR-223	ENST00000544268	LY6H	O94772	140 aa		12.04	□□□□□ -0.48
CHFR-223	ENST00000544268	FER1L6-AS1	Q8NA97	138 aa		12.04	□□□□□ -0.48
CHFR-223	ENST00000544268	OR2T6	Q8NHC8	308 aa		12.04	□□□□□ -0.48
CHFR-223	ENST00000544268	ZNF503	Q96F45	646 aa		12.04	□□□□□ -0.48
CHFR-223	ENST00000544268	PLEKHA3	Q9HB20	300 aa		12.04	□□□□□ -0.48
CHFR-223	ENST00000544268	TRAV8-6	A0A0B4J262	113 aa		12.03	□□□□□ -0.48
CHFR-223	ENST00000544268	TNFRSF13B	O14836	293 aa	Predicted RBP	12.03	□□□□□ -0.48
CHFR-223	ENST00000544268	SLC35B1	P78383	322 aa		12.03	□□□□□ -0.48
CHFR-223	ENST00000544268	PRR20E	P86478	221 aa		12.03	□□□□□ -0.48
CHFR-223	ENST00000544268	PRR20C	P86479	221 aa		12.03	□□□□□ -0.48
CHFR-223	ENST00000544268	PRR20D	P86480	221 aa		12.03	□□□□□ -0.48
CHFR-223	ENST00000544268	PRR20B	P86481	221 aa		12.03	□□□□□ -0.48
CHFR-223	ENST00000544268	PRR20A	P86496	221 aa		12.03	□□□□□ -0.48
CHFR-223	ENST00000544268	RUSC1-AS1	Q66K80	236 aa		12.03	□□□□□ -0.48
CHFR-223	ENST00000544268	SLC25A34	Q6PIV7	304 aa		12.03	□□□□□ -0.48
CHFR-223	ENST00000544268	OR7C2	O60412	319 aa		12.03	□□□□□ -0.48
CHFR-223	ENST00000544268	APELA	P0DMC3	54 aa		12.03	□□□□□ -0.48
CHFR-223	ENST00000544268	RAB9A	P51151	201 aa		12.03	□□□□□ -0.48
CHFR-223	ENST00000544268	MRPL54	Q6P161	138 aa	Known RBP	12.03	□□□□□ -0.48
CHFR-223	ENST00000544268	ST6GALNAC6	Q969X2	333 aa		12.03	□□□□□ -0.48
CHFR-223	ENST00000544268	TPSG1	Q9NRR2	321 aa		12.03	□□□□□ -0.48
CHFR-223	ENST00000544268	CTSZ	Q9UBR2	303 aa		12.03	□□□□□ -0.48
CHFR-223	ENST00000544268	CHD6	Q8TD26	2715 aa		12.02	□□□□□ -0.48
CHFR-223	ENST00000544268	IGHV3-72	A0A0B4J1Y9	119 aa		12.02	□□□□□ -0.48
CHFR-223	ENST00000544268	TRAV5	A0A0B4J249	113 aa		12.02	□□□□□ -0.48
CHFR-223	ENST00000544268	SMIM27	A0A1W2PRY6	76 aa		12.02	□□□□□ -0.48
CHFR-223	ENST00000544268	MT-CO2	P00403	227 aa		12.02	□□□□□ -0.48
CHFR-223	ENST00000544268	AREG	P15514	252 aa		12.02	□□□□□ -0.48
CHFR-223	ENST00000544268	GNG4	P50150	75 aa		12.02	□□□□□ -0.48
CHFR-223	ENST00000544268	PRCD	Q00LT1	54 aa		12.02	□□□□□ -0.48
CHFR-223	ENST00000544268	KLF5	Q13887	457 aa	Predicted RBP	12.02	□□□□□ -0.48
CHFR-223	ENST00000544268	HARBI1	Q96MB7	349 aa		12.02	□□□□□ -0.48
CHFR-223	ENST00000544268	TMEM70	Q9BUB7	260 aa		12.02	□□□□□ -0.48
CHFR-223	ENST00000544268	RAB1B	Q9H0U4	201 aa		12.02	□□□□□ -0.48
CHFR-223	ENST00000544268	C1RL	Q9NZP8	487 aa		12.02	□□□□□ -0.48
CHFR-223	ENST00000544268	KMT2B	Q9UMN6	2715 aa	Predicted RBP	12.02	□□□□□ -0.49
CHFR-223	ENST00000544268	HELT	A6NFD8	242 aa		12.02	□□□□□ -0.49
CHFR-223	ENST00000544268	ISLR	O14498	428 aa		12.02	□□□□□ -0.49
CHFR-223	ENST00000544268	LIPF	P07098	398 aa		12.02	□□□□□ -0.49
CHFR-223	ENST00000544268	USF1	P22415	310 aa	Predicted RBP	12.02	□□□□□ -0.49
CHFR-223	ENST00000544268	PSG5	Q15238	335 aa		12.02	□□□□□ -0.49
CHFR-223	ENST00000544268	DTX2	Q86UW9	622 aa		12.02	□□□□□ -0.49
CHFR-223	ENST00000544268	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	12.02	□□□□□ -0.49
CHFR-223	ENST00000544268	NABP2	Q9BQ15	211 aa		12.02	□□□□□ -0.49
CHFR-223	ENST00000544268	COMMD5	Q9GZQ3	224 aa		12.02	□□□□□ -0.49
CHFR-223	ENST00000544268	RNASE7	Q9H1E1	156 aa	Known RBP	12.02	□□□□□ -0.49
CHFR-223	ENST00000544268	UBTD1	Q9HAC8	227 aa		12.02	□□□□□ -0.49
CHFR-223	ENST00000544268	hADV38S2	A0JD32	116 aa		12.01	□□□□□ -0.49
CHFR-223	ENST00000544268	OR4C46	A6NHA9	309 aa		12.01	□□□□□ -0.49
CHFR-223	ENST00000544268	CRX	O43186	299 aa	Predicted RBP	12.01	□□□□□ -0.49
CHFR-223	ENST00000544268	TCL1A	P56279	114 aa		12.01	□□□□□ -0.49
CHFR-223	ENST00000544268	CENPW	Q5EE01	88 aa		12.01	□□□□□ -0.49
CHFR-223	ENST00000544268	RASL11A	Q6T310	242 aa		12.01	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms