RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	HBG2	P69892	147 aa		5.01	□□□□□ -1.61
CIT-213	ENST00000543324	ATP6V1F	Q16864	119 aa		5.01	□□□□□ -1.61
CIT-213	ENST00000543324	C21orf62-AS1	Q17RA5	79 aa		5.01	□□□□□ -1.61
CIT-213	ENST00000543324	CXorf66	Q5JRM2	361 aa	Predicted RBP	5.01	□□□□□ -1.61
CIT-213	ENST00000543324	ZNF705A	Q6ZN79	300 aa	Predicted RBP	5.01	□□□□□ -1.61
CIT-213	ENST00000543324	SSX7	Q7RTT5	188 aa		5.01	□□□□□ -1.61
CIT-213	ENST00000543324	OR5AU1	Q8NGC0	362 aa		5.01	□□□□□ -1.61
CIT-213	ENST00000543324	MRGPRD	Q8TDS7	321 aa		5.01	□□□□□ -1.61
CIT-213	ENST00000543324	TXNDC17	Q9BRA2	123 aa		5.01	□□□□□ -1.61
CIT-213	ENST00000543324	WDR61	Q9GZS3	305 aa	Known RBP	5.01	□□□□□ -1.61
CIT-213	ENST00000543324	PARL	Q9H300	379 aa		5.01	□□□□□ -1.61
CIT-213	ENST00000543324	PGPEP1	Q9NXJ5	209 aa		5.01	□□□□□ -1.61
CIT-213	ENST00000543324	ZNF580	Q9UK33	172 aa		5.01	□□□□□ -1.61
CIT-213	ENST00000543324	SLC45A2	Q9UMX9	530 aa		5.01	□□□□□ -1.61
CIT-213	ENST00000543324	ST3GAL6	Q9Y274	331 aa		5.01	□□□□□ -1.61
CIT-213	ENST00000543324	MOB4	Q9Y3A3	225 aa		5.01	□□□□□ -1.61
CIT-213	ENST00000543324	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	5.01	□□□□□ -1.61
CIT-213	ENST00000543324	TRBV9	A0A0B4J1U6	114 aa		5	□□□□□ -1.61
CIT-213	ENST00000543324	TMEM30CP	A0ZSE6	113 aa		5	□□□□□ -1.61
CIT-213	ENST00000543324	IGHG2	P01859	326 aa		5	□□□□□ -1.61
CIT-213	ENST00000543324	CTRL	P40313	264 aa		5	□□□□□ -1.61
CIT-213	ENST00000543324	GNG10	P50151	68 aa		5	□□□□□ -1.61
CIT-213	ENST00000543324	CFHR3	Q02985	330 aa		5	□□□□□ -1.61
CIT-213	ENST00000543324		Q0VG73	95 aa		5	□□□□□ -1.61
CIT-213	ENST00000543324	TMEM30B	Q3MIR4	351 aa		5	□□□□□ -1.61
CIT-213	ENST00000543324	MORN2	Q502X0	79 aa		5	□□□□□ -1.61
CIT-213	ENST00000543324	LEMD1	Q68G75	181 aa		5	□□□□□ -1.61
CIT-213	ENST00000543324	FAM53A	Q6NSI3	398 aa	Predicted RBP	5	□□□□□ -1.61
CIT-213	ENST00000543324	SLC25A24	Q6NUK1	477 aa		5	□□□□□ -1.61
CIT-213	ENST00000543324	LCN15	Q6UWW0	184 aa		5	□□□□□ -1.61
CIT-213	ENST00000543324	SLC25A48	Q6ZT89	311 aa	Known RBP	5	□□□□□ -1.61
CIT-213	ENST00000543324	DRAM1	Q8N682	238 aa		5	□□□□□ -1.61
CIT-213	ENST00000543324	LINC00482	Q8N8I6	264 aa		5	□□□□□ -1.61
CIT-213	ENST00000543324	RNF152	Q8N8N0	203 aa		5	□□□□□ -1.61
CIT-213	ENST00000543324	CMTM2	Q8TAZ6	248 aa		5	□□□□□ -1.61
CIT-213	ENST00000543324	MRPL30	Q8TCC3	161 aa	Known RBP	5	□□□□□ -1.61
CIT-213	ENST00000543324	TMEM37	Q8WXS4	190 aa		5	□□□□□ -1.61
CIT-213	ENST00000543324	LEAP2	Q969E1	77 aa		5	□□□□□ -1.61
CIT-213	ENST00000543324	RPE	Q96AT9	228 aa		5	□□□□□ -1.61
CIT-213	ENST00000543324	SLC35E1	Q96K37	410 aa		5	□□□□□ -1.61
CIT-213	ENST00000543324	VAMP8	Q9BV40	100 aa		5	□□□□□ -1.61
CIT-213	ENST00000543324	ZMAT4	Q9H898	229 aa		5	□□□□□ -1.61
CIT-213	ENST00000543324	DNAJC4	Q9NNZ3	241 aa		5	□□□□□ -1.61
CIT-213	ENST00000543324	MBNL3	Q9NUK0	354 aa	Known RBP	5	□□□□□ -1.61
CIT-213	ENST00000543324	TRAPPC1	Q9Y5R8	145 aa		5	□□□□□ -1.61
CIT-213	ENST00000543324	TSSC4	Q9Y5U2	329 aa	Predicted RBP	5	□□□□□ -1.61
CIT-213	ENST00000543324	FLG2	Q5D862	2391 aa	Predicted RBP	4.99	□□□□□ -1.61
CIT-213	ENST00000543324	TRBV6-6	A0A0A6YYG2	114 aa		4.99	□□□□□ -1.61
CIT-213	ENST00000543324	IGHV1-3	A0A0C4DH29	117 aa		4.99	□□□□□ -1.61
CIT-213	ENST00000543324	SH2D7	A6NKC9	451 aa	Predicted RBP	4.99	□□□□□ -1.61
CIT-213	ENST00000543324	C12orf77	C9JDV5	145 aa		4.99	□□□□□ -1.61
CIT-213	ENST00000543324		F6UZH7	168 aa		4.99	□□□□□ -1.61
CIT-213	ENST00000543324	SYNGR2	O43760	224 aa		4.99	□□□□□ -1.61
CIT-213	ENST00000543324	OR7C1	O76099	320 aa	Predicted RBP	4.99	□□□□□ -1.61
CIT-213	ENST00000543324	NAPSA	O96009	420 aa		4.99	□□□□□ -1.61
CIT-213	ENST00000543324	PPBP	P02775	128 aa		4.99	□□□□□ -1.61
CIT-213	ENST00000543324	FAM106CP	P0CH98	169 aa		4.99	□□□□□ -1.61
CIT-213	ENST00000543324	S100G	P29377	79 aa		4.99	□□□□□ -1.61
CIT-213	ENST00000543324	KIR2DS1	Q14954	304 aa		4.99	□□□□□ -1.61
CIT-213	ENST00000543324	PRSS8	Q16651	343 aa		4.99	□□□□□ -1.61
CIT-213	ENST00000543324	COX19	Q49B96	90 aa		4.99	□□□□□ -1.61
CIT-213	ENST00000543324	AARD	Q4LEZ3	155 aa		4.99	□□□□□ -1.61
CIT-213	ENST00000543324	TOMM20L	Q6UXN7	152 aa		4.99	□□□□□ -1.61
CIT-213	ENST00000543324	ZNF818P	Q6ZRF7	136 aa		4.99	□□□□□ -1.61
CIT-213	ENST00000543324	HAPLN4	Q86UW8	402 aa		4.99	□□□□□ -1.61
CIT-213	ENST00000543324		Q8N9W7	124 aa		4.99	□□□□□ -1.61
CIT-213	ENST00000543324	OR4X2	Q8NGF9	303 aa		4.99	□□□□□ -1.61
CIT-213	ENST00000543324	RFESD	Q8TAC1	157 aa		4.99	□□□□□ -1.61
CIT-213	ENST00000543324	MYOZ3	Q8TDC0	251 aa		4.99	□□□□□ -1.61
CIT-213	ENST00000543324	GPR146	Q96CH1	333 aa		4.99	□□□□□ -1.61
CIT-213	ENST00000543324	ELOVL1	Q9BW60	279 aa		4.99	□□□□□ -1.61
CIT-213	ENST00000543324	RIMS4	Q9H426	269 aa	Predicted RBP	4.99	□□□□□ -1.61
CIT-213	ENST00000543324	VSIR	Q9H7M9	311 aa		4.99	□□□□□ -1.61
CIT-213	ENST00000543324	SLC39A9	Q9NUM3	307 aa		4.99	□□□□□ -1.61
CIT-213	ENST00000543324	UQCR10	Q9UDW1	63 aa		4.99	□□□□□ -1.61
CIT-213	ENST00000543324	C20orf202	A1L168	122 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	PSMB11	A5LHX3	300 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	PDE6D	O43924	150 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	NDUFB8	O95169	186 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	KRAS	P01116	189 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	IGKV1D-33	P01593	117 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	IGKV1-33	P01594	117 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	IGHV3-7	P01780	117 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	F2R	P25116	425 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	CD1B	P29016	333 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	ADM	P35318	185 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	THBS3	P49746	956 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	ZNF134	P52741	427 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	FGF8	P55075	233 aa	Predicted RBP	4.98	□□□□□ -1.61
CIT-213	ENST00000543324	LINC00310	P59036	64 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	UBE2V1	Q13404	147 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	OR5I1	Q13606	314 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	MSMO1	Q15800	293 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	VWC2	Q2TAL6	325 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	CT45A1	Q5HYN5	189 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	TMEM14EP	Q6UXP3	125 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324		Q6ZWC4	215 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	TMEM256	Q8N2U0	113 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324	TMEM217	Q8N7C4	229 aa		4.98	□□□□□ -1.61
CIT-213	ENST00000543324		Q8N976	141 aa		4.98	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms