RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 ZNF355PQ9NSJ1 428 aa8.91□□□□□ -0.98
SRGAP1-205ENST00000542841 MAP1LC3B2A6NCE7 125 aa8.9□□□□□ -0.98
SRGAP1-205ENST00000542841 MFSD2BA6NFX1 497 aa8.9□□□□□ -0.98
SRGAP1-205ENST00000542841 NDUFS6O75380 124 aaKnown RBP8.9□□□□□ -0.98
SRGAP1-205ENST00000542841 IGHG4P01861 327 aa8.9□□□□□ -0.98
SRGAP1-205ENST00000542841 OR5G3P0C626 314 aa8.9□□□□□ -0.98
SRGAP1-205ENST00000542841 S100A1P23297 94 aa8.9□□□□□ -0.98
SRGAP1-205ENST00000542841 S100A7P31151 101 aa8.9□□□□□ -0.98
SRGAP1-205ENST00000542841 MYCNOSP40205 109 aa8.9□□□□□ -0.98
SRGAP1-205ENST00000542841 TAS2R45P59539 299 aa8.9□□□□□ -0.98
SRGAP1-205ENST00000542841 ATP5G2Q06055 141 aa8.9□□□□□ -0.98
SRGAP1-205ENST00000542841 ZNF726P1Q15940 193 aa8.9□□□□□ -0.98
SRGAP1-205ENST00000542841 C15orf32Q32M92 178 aa8.9□□□□□ -0.98
SRGAP1-205ENST00000542841 FAM122CQ6P4D5 195 aa8.9□□□□□ -0.98
SRGAP1-205ENST00000542841 SPSB3Q6PJ21 355 aa8.9□□□□□ -0.98
SRGAP1-205ENST00000542841 SLC7A5P1Q8MH63 180 aa8.9□□□□□ -0.98
SRGAP1-205ENST00000542841 ZNF502Q8TBZ5 544 aa8.9□□□□□ -0.98
SRGAP1-205ENST00000542841 SFT2D1Q8WV19 159 aa8.9□□□□□ -0.98
SRGAP1-205ENST00000542841 PBDC1Q9BVG4 233 aa8.9□□□□□ -0.98
SRGAP1-205ENST00000542841 MAP1LC3BQ9GZQ8 125 aa8.9□□□□□ -0.98
SRGAP1-205ENST00000542841 RNF24Q9Y225 148 aa8.9□□□□□ -0.98
SRGAP1-205ENST00000542841 SACSQ9NZJ4 4579 aa8.89□□□□□ -0.99
SRGAP1-205ENST00000542841 LCE6AA0A183 80 aa8.89□□□□□ -0.99
SRGAP1-205ENST00000542841 PSMB11A5LHX3 300 aa8.89□□□□□ -0.99
SRGAP1-205ENST00000542841 F8W735 103 aaPredicted RBP8.89□□□□□ -0.99
SRGAP1-205ENST00000542841 ATP6V1G1O75348 118 aa8.89□□□□□ -0.99
SRGAP1-205ENST00000542841 IGKV1-17P01599 117 aa8.89□□□□□ -0.99
SRGAP1-205ENST00000542841 IGHV3-48P01763 117 aa8.89□□□□□ -0.99
SRGAP1-205ENST00000542841 TRGV3P03979 118 aa8.89□□□□□ -0.99
SRGAP1-205ENST00000542841 ELANEP08246 267 aa8.89□□□□□ -0.99
SRGAP1-205ENST00000542841 STAG3L2P0CL84 134 aa8.89□□□□□ -0.99
SRGAP1-205ENST00000542841 STAG3L3P0CL85 134 aa8.89□□□□□ -0.99
SRGAP1-205ENST00000542841 PSMB3P49720 205 aa8.89□□□□□ -0.99
SRGAP1-205ENST00000542841 Q56UQ5 140 aa8.89□□□□□ -0.99
SRGAP1-205ENST00000542841 C8orf86Q6ZUL3 223 aa8.89□□□□□ -0.99
SRGAP1-205ENST00000542841 OR51G1Q8NGK1 321 aa8.89□□□□□ -0.99
SRGAP1-205ENST00000542841 RAB24Q969Q5 203 aa8.89□□□□□ -0.99
SRGAP1-205ENST00000542841 DNAJC4Q9NNZ3 241 aa8.89□□□□□ -0.99
SRGAP1-205ENST00000542841 FUT9Q9Y231 359 aa8.89□□□□□ -0.99
SRGAP1-205ENST00000542841 IGHV3-21A0A0B4J1V1 117 aa8.88□□□□□ -0.99
SRGAP1-205ENST00000542841 NUPL2O15504 423 aaKnown RBP8.88□□□□□ -0.99
SRGAP1-205ENST00000542841 COX7A2P2O60397 106 aa8.88□□□□□ -0.99
SRGAP1-205ENST00000542841 OR2C1O95371 312 aa8.88□□□□□ -0.99
SRGAP1-205ENST00000542841 CXorf1O96002 111 aa8.88□□□□□ -0.99
SRGAP1-205ENST00000542841 IFNA1P01562 189 aa8.88□□□□□ -0.99
SRGAP1-205ENST00000542841 RD3LP0DJH9 198 aa8.88□□□□□ -0.99
SRGAP1-205ENST00000542841 TPPP2P59282 170 aa8.88□□□□□ -0.99
SRGAP1-205ENST00000542841 ZNF90Q03938 601 aa8.88□□□□□ -0.99
SRGAP1-205ENST00000542841 KHDC3LQ587J8 217 aa8.88□□□□□ -0.99
SRGAP1-205ENST00000542841 C10orf113Q5VZT2 155 aa8.88□□□□□ -0.99
SRGAP1-205ENST00000542841 TEX38Q6PEX7 206 aa8.88□□□□□ -0.99
SRGAP1-205ENST00000542841 PQLC2Q6ZP29 291 aa8.88□□□□□ -0.99
SRGAP1-205ENST00000542841 Q8WTZ3 238 aa8.88□□□□□ -0.99
SRGAP1-205ENST00000542841 NOL4LQ96MY1 436 aaPredicted RBP8.88□□□□□ -0.99
SRGAP1-205ENST00000542841 FAM210AQ96ND0 272 aa8.88□□□□□ -0.99
SRGAP1-205ENST00000542841 PRR25Q96S07 402 aa8.88□□□□□ -0.99
SRGAP1-205ENST00000542841 SLC25A22Q9H936 323 aa8.88□□□□□ -0.99
SRGAP1-205ENST00000542841 TECRQ9NZ01 308 aaKnown RBP8.88□□□□□ -0.99
SRGAP1-205ENST00000542841 DNAH7Q8WXX0 4024 aa8.88□□□□□ -0.99
SRGAP1-205ENST00000542841 STAB2Q8WWQ8 2551 aa8.87□□□□□ -0.99
SRGAP1-205ENST00000542841 TGOLN2O43493 480 aa8.87□□□□□ -0.99
SRGAP1-205ENST00000542841 HYPMO75409 117 aa8.87□□□□□ -0.99
SRGAP1-205ENST00000542841 PSG1P11464 419 aa8.87□□□□□ -0.99
SRGAP1-205ENST00000542841 PSMB8P28062 276 aa8.87□□□□□ -0.99
SRGAP1-205ENST00000542841 RAB9AP51151 201 aa8.87□□□□□ -0.99
SRGAP1-205ENST00000542841 RELQ04864 619 aaPredicted RBP8.87□□□□□ -0.99
SRGAP1-205ENST00000542841 FOXE3Q13461 319 aa8.87□□□□□ -0.99
SRGAP1-205ENST00000542841 PEA15Q15121 130 aa8.87□□□□□ -0.99
SRGAP1-205ENST00000542841 TIGITQ495A1 244 aa8.87□□□□□ -0.99
SRGAP1-205ENST00000542841 FAM78BQ5VT40 261 aa8.87□□□□□ -0.99
SRGAP1-205ENST00000542841 LCN15Q6UWW0 184 aa8.87□□□□□ -0.99
SRGAP1-205ENST00000542841 ZNF600Q6ZNG1 722 aa8.87□□□□□ -0.99
SRGAP1-205ENST00000542841 ZNF329Q86UD4 541 aa8.87□□□□□ -0.99
SRGAP1-205ENST00000542841 RNF152Q8N8N0 203 aa8.87□□□□□ -0.99
SRGAP1-205ENST00000542841 KLHL30-AS1Q8NEE0 82 aa8.87□□□□□ -0.99
SRGAP1-205ENST00000542841 STXBP6Q8NFX7 210 aa8.87□□□□□ -0.99
SRGAP1-205ENST00000542841 LYSTQ99698 3801 aa8.87□□□□□ -0.99
SRGAP1-205ENST00000542841 TXNDC17Q9BRA2 123 aa8.87□□□□□ -0.99
SRGAP1-205ENST00000542841 MANBALQ9NQG1 85 aa8.87□□□□□ -0.99
SRGAP1-205ENST00000542841 LINC00527Q9UJ94 153 aa8.87□□□□□ -0.99
SRGAP1-205ENST00000542841 ARL2-SNX15V9GYD0 113 aa8.87□□□□□ -0.99
SRGAP1-205ENST00000542841 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.86□□□□□ -0.99
SRGAP1-205ENST00000542841 ANKRD34BA5PLL1 514 aa8.86□□□□□ -0.99
SRGAP1-205ENST00000542841 KRBOX1C9JBD0 128 aa8.86□□□□□ -0.99
SRGAP1-205ENST00000542841 CD5P06127 495 aa8.86□□□□□ -0.99
SRGAP1-205ENST00000542841 CTSGP08311 255 aa8.86□□□□□ -0.99
SRGAP1-205ENST00000542841 C8orf88P0DMB2 117 aa8.86□□□□□ -0.99
SRGAP1-205ENST00000542841 GATA2P23769 480 aaPredicted RBP8.86□□□□□ -0.99
SRGAP1-205ENST00000542841 GUK1Q16774 197 aa8.86□□□□□ -0.99
SRGAP1-205ENST00000542841 GCSAMLQ5JQS6 135 aa8.86□□□□□ -0.99
SRGAP1-205ENST00000542841 C18orf65Q6ZTR6 163 aa8.86□□□□□ -0.99
SRGAP1-205ENST00000542841 SSX7Q7RTT5 188 aa8.86□□□□□ -0.99
SRGAP1-205ENST00000542841 TMEM37Q8WXS4 190 aa8.86□□□□□ -0.99
SRGAP1-205ENST00000542841 CCDC140Q96MF4 163 aa8.86□□□□□ -0.99
SRGAP1-205ENST00000542841 MS4A10Q96PG2 267 aa8.86□□□□□ -0.99
SRGAP1-205ENST00000542841 RCHY1Q96PM5 261 aa8.86□□□□□ -0.99
SRGAP1-205ENST00000542841 CITED4Q96RK1 184 aa8.86□□□□□ -0.99
SRGAP1-205ENST00000542841 TMEM167BQ9NRX6 74 aa8.86□□□□□ -0.99
SRGAP1-205ENST00000542841 HIGD1AQ9Y241 93 aa8.86□□□□□ -0.99
SRGAP1-205ENST00000542841 CLEC3BP05452 202 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms