RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 F11RQ9Y624 299 aaKnown RBP3.38□□□□□ -1.87
MDM2-228ENST00000542502 WSB1Q9Y6I7 421 aa3.38□□□□□ -1.87
MDM2-228ENST00000542502 NOTCH1P46531 2555 aa3.37□□□□□ -1.87
MDM2-228ENST00000542502 TRBV9A0A0B4J1U6 114 aa3.37□□□□□ -1.87
MDM2-228ENST00000542502 IGLC7A0M8Q6 106 aa3.37□□□□□ -1.87
MDM2-228ENST00000542502 C5orf51A6NDU8 294 aa3.37□□□□□ -1.87
MDM2-228ENST00000542502 CEBPZOSA8MTT3 80 aa3.37□□□□□ -1.87
MDM2-228ENST00000542502 SYNGR2O43760 224 aa3.37□□□□□ -1.87
MDM2-228ENST00000542502 SSNA1O43805 119 aa3.37□□□□□ -1.87
MDM2-228ENST00000542502 PITX3O75364 302 aa3.37□□□□□ -1.87
MDM2-228ENST00000542502 CFDP00746 253 aaPredicted RBP3.37□□□□□ -1.87
MDM2-228ENST00000542502 IGKV1-39P01597 117 aa3.37□□□□□ -1.87
MDM2-228ENST00000542502 IGKV1D-39P04432 117 aa3.37□□□□□ -1.87
MDM2-228ENST00000542502 HSPB1P04792 205 aaKnown RBP3.37□□□□□ -1.87
MDM2-228ENST00000542502 CD5P06127 495 aa3.37□□□□□ -1.87
MDM2-228ENST00000542502 LGALS1P09382 135 aaKnown RBP3.37□□□□□ -1.87
MDM2-228ENST00000542502 FCGR2BP31994 310 aaPredicted RBP3.37□□□□□ -1.87
MDM2-228ENST00000542502 BMI1P35226 326 aa3.37□□□□□ -1.87
MDM2-228ENST00000542502 GPX4P36969 197 aaPredicted RBP3.37□□□□□ -1.87
MDM2-228ENST00000542502 INSL3P51460 131 aa3.37□□□□□ -1.87
MDM2-228ENST00000542502 RPL23AP62750 156 aaKnown RBP3.37□□□□□ -1.87
MDM2-228ENST00000542502 RHOGP84095 191 aa3.37□□□□□ -1.87
MDM2-228ENST00000542502 ZNF616Q08AN1 781 aa3.37□□□□□ -1.87
MDM2-228ENST00000542502 ZNF674Q2M3X9 581 aa3.37□□□□□ -1.87
MDM2-228ENST00000542502 IAH1Q2TAA2 248 aaPredicted RBP3.37□□□□□ -1.87
MDM2-228ENST00000542502 ANKRD55Q3KP44 614 aa3.37□□□□□ -1.87
MDM2-228ENST00000542502 FAM106AQ4KMX7 169 aa3.37□□□□□ -1.87
MDM2-228ENST00000542502 SLC25A24Q6NUK1 477 aa3.37□□□□□ -1.87
MDM2-228ENST00000542502 NOTCH2NLQ7Z3S9 236 aa3.37□□□□□ -1.87
MDM2-228ENST00000542502 ZNF491Q8N8L2 437 aa3.37□□□□□ -1.87
MDM2-228ENST00000542502 KLHL30-AS1Q8NEE0 82 aa3.37□□□□□ -1.87
MDM2-228ENST00000542502 OR5T1Q8NG75 326 aa3.37□□□□□ -1.87
MDM2-228ENST00000542502 MYOZ3Q8TDC0 251 aa3.37□□□□□ -1.87
MDM2-228ENST00000542502 GPR146Q96CH1 333 aa3.37□□□□□ -1.87
MDM2-228ENST00000542502 BSCL2Q96G97 398 aaPredicted RBP3.37□□□□□ -1.87
MDM2-228ENST00000542502 C2orf50Q96LR7 162 aa3.37□□□□□ -1.87
MDM2-228ENST00000542502 ASCL2Q99929 193 aa3.37□□□□□ -1.87
MDM2-228ENST00000542502 ANK2Q01484 3957 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 IGLV11-55A0A075B6I3 123 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 TRAV3A0A0B4J244 114 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 C7orf66A4D0T2 115 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 KRTAP16-1A8MUX0 517 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 FNDC10F2Z333 226 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 G3V318 75 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 L7N2F9 121 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 CCL24O00175 119 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 NUPL2O15504 423 aaKnown RBP3.36□□□□□ -1.87
MDM2-228ENST00000542502 TSC22D2O75157 780 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 GGCTO75223 188 aaKnown RBP3.36□□□□□ -1.87
MDM2-228ENST00000542502 IFNA10P01566 189 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 IFNA4P05014 189 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 CD28P10747 220 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 NPY1RP25929 384 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 NUP62P37198 522 aaPredicted RBP3.36□□□□□ -1.87
MDM2-228ENST00000542502 HBG1P69891 147 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 HBG2P69892 147 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 NDPQ00604 133 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 IFITM3Q01628 133 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 WT1-ASQ06250 92 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 RAB31Q13636 194 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 C15orf32Q32M92 178 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 BSXQ3C1V8 233 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 C2orf83Q53S99 150 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 ZNF343Q6P1L6 599 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 BTNL8Q6UX41 500 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 TRPT1Q86TN4 253 aaKnown RBP3.36□□□□□ -1.87
MDM2-228ENST00000542502 LHFPL5Q8TAF8 219 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 DTD1Q8TEA8 209 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 MARC2Q969Z3 335 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 PINX1Q96BK5 328 aaKnown RBP3.36□□□□□ -1.87
MDM2-228ENST00000542502 NARS2Q96I59 477 aaKnown RBP3.36□□□□□ -1.87
MDM2-228ENST00000542502 SMIM8Q96KF7 97 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 FAM103A1Q9BTL3 118 aaKnown RBP3.36□□□□□ -1.87
MDM2-228ENST00000542502 GGACTQ9BVM4 153 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 NMES1Q9C002 83 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 SLC25A31Q9H0C2 315 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 MED28Q9H204 178 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 GSKIPQ9P0R6 139 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 PEF1Q9UBV8 284 aaKnown RBP3.36□□□□□ -1.87
MDM2-228ENST00000542502 FLVCR2Q9UPI3 526 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 NSG2Q9Y328 171 aa3.36□□□□□ -1.87
MDM2-228ENST00000542502 STRAPQ9Y3F4 350 aaKnown RBP3.36□□□□□ -1.87
MDM2-228ENST00000542502 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.35□□□□□ -1.87
MDM2-228ENST00000542502 FAM25EA8MYX2 175 aa3.35□□□□□ -1.87
MDM2-228ENST00000542502 E5RGE8 158 aa3.35□□□□□ -1.87
MDM2-228ENST00000542502 LINC01619G3V211 115 aa3.35□□□□□ -1.87
MDM2-228ENST00000542502 I3L521 148 aa3.35□□□□□ -1.87
MDM2-228ENST00000542502 LGALS9O00182 355 aa3.35□□□□□ -1.87
MDM2-228ENST00000542502 SOX15O60248 233 aa3.35□□□□□ -1.87
MDM2-228ENST00000542502 GNG7O60262 68 aa3.35□□□□□ -1.87
MDM2-228ENST00000542502 CIDEAO60543 219 aa3.35□□□□□ -1.87
MDM2-228ENST00000542502 AREGP15514 252 aa3.35□□□□□ -1.87
MDM2-228ENST00000542502 OPRK1P41145 380 aa3.35□□□□□ -1.87
MDM2-228ENST00000542502 BCAP31P51572 246 aa3.35□□□□□ -1.87
MDM2-228ENST00000542502 SELENOTP62341 195 aa3.35□□□□□ -1.87
MDM2-228ENST00000542502 BAXQ07812 192 aa3.35□□□□□ -1.87
MDM2-228ENST00000542502 OXA1LQ15070 435 aa3.35□□□□□ -1.87
MDM2-228ENST00000542502 ATP6V1FQ16864 119 aa3.35□□□□□ -1.87
MDM2-228ENST00000542502 RPEL1Q2QD12 228 aa3.35□□□□□ -1.87
MDM2-228ENST00000542502 NSUN5P1Q3KNT7 163 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms