RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 MFAP4P55083 255 aa13.47□□□□□ -0.25
TMEM50B-210ENST00000542230 C15orf32Q32M92 178 aa13.47□□□□□ -0.25
TMEM50B-210ENST00000542230 NHLRC2Q8NBF2 726 aa13.47□□□□□ -0.25
TMEM50B-210ENST00000542230 C17orf77Q96MU5 243 aa13.47□□□□□ -0.25
TMEM50B-210ENST00000542230 HECTD1Q9ULT8 2610 aa13.47□□□□□ -0.25
TMEM50B-210ENST00000542230 HELTA6NFD8 242 aa13.47□□□□□ -0.25
TMEM50B-210ENST00000542230 CTSGP08311 255 aa13.47□□□□□ -0.25
TMEM50B-210ENST00000542230 CENPWQ5EE01 88 aa13.47□□□□□ -0.25
TMEM50B-210ENST00000542230 ZNF600Q6ZNG1 722 aa13.47□□□□□ -0.25
TMEM50B-210ENST00000542230 SAV1Q9H4B6 383 aaPredicted RBP13.47□□□□□ -0.25
TMEM50B-210ENST00000542230 MOB4Q9Y3A3 225 aa13.47□□□□□ -0.25
TMEM50B-210ENST00000542230 NBEAP1P0C6P0 100 aa13.46□□□□□ -0.25
TMEM50B-210ENST00000542230 FAM3BP58499 235 aaPredicted RBP13.46□□□□□ -0.25
TMEM50B-210ENST00000542230 BLCAPP62952 87 aa13.46□□□□□ -0.25
TMEM50B-210ENST00000542230 RHOGP84095 191 aa13.46□□□□□ -0.25
TMEM50B-210ENST00000542230 FLI1Q01543 452 aaPredicted RBP13.46□□□□□ -0.25
TMEM50B-210ENST00000542230 LINC01356Q8N9X3 169 aa13.46□□□□□ -0.25
TMEM50B-210ENST00000542230 FAM110DQ8TAY7 271 aaPredicted RBP13.46□□□□□ -0.25
TMEM50B-210ENST00000542230 RNF125Q96EQ8 232 aa13.46□□□□□ -0.25
TMEM50B-210ENST00000542230 ZNF414Q96IQ9 312 aa13.46□□□□□ -0.25
TMEM50B-210ENST00000542230 ARL2-SNX15V9GYD0 113 aa13.46□□□□□ -0.25
TMEM50B-210ENST00000542230 CUBNO60494 3623 aa13.46□□□□□ -0.25
TMEM50B-210ENST00000542230 C1orf196B1AJZ1 125 aa13.46□□□□□ -0.25
TMEM50B-210ENST00000542230 TOMM40O96008 361 aa13.46□□□□□ -0.25
TMEM50B-210ENST00000542230 GALR1P47211 349 aa13.46□□□□□ -0.25
TMEM50B-210ENST00000542230 DEFB113Q30KQ7 82 aa13.46□□□□□ -0.25
TMEM50B-210ENST00000542230 CTDSP1Q9GZU7 261 aa13.46□□□□□ -0.25
TMEM50B-210ENST00000542230 MYCNOSP40205 109 aa13.45□□□□□ -0.26
TMEM50B-210ENST00000542230 Q5PR19 223 aa13.45□□□□□ -0.26
TMEM50B-210ENST00000542230 FAM210BQ96KR6 192 aa13.45□□□□□ -0.26
TMEM50B-210ENST00000542230 NOL4LQ96MY1 436 aaPredicted RBP13.45□□□□□ -0.26
TMEM50B-210ENST00000542230 ZNF586Q9NXT0 402 aa13.45□□□□□ -0.26
TMEM50B-210ENST00000542230 MYO9AB2RTY4 2548 aa13.45□□□□□ -0.26
TMEM50B-210ENST00000542230 TRAV20A0A0B4J274 112 aa13.45□□□□□ -0.26
TMEM50B-210ENST00000542230 FCGR2BP31994 310 aaPredicted RBP13.45□□□□□ -0.26
TMEM50B-210ENST00000542230 SMUG1Q53HV7 270 aa13.45□□□□□ -0.26
TMEM50B-210ENST00000542230 SFRP2Q96HF1 295 aa13.45□□□□□ -0.26
TMEM50B-210ENST00000542230 RPH3ALQ9UNE2 315 aa13.45□□□□□ -0.26
TMEM50B-210ENST00000542230 AKAP9Q99996 3911 aa13.44□□□□□ -0.26
TMEM50B-210ENST00000542230 WI2-2373I1.2A0A1W2PRP0 233 aa13.44□□□□□ -0.26
TMEM50B-210ENST00000542230 PGPA6NDG6 321 aa13.44□□□□□ -0.26
TMEM50B-210ENST00000542230 SLC17A3O00476 420 aa13.44□□□□□ -0.26
TMEM50B-210ENST00000542230 PLA2G2AP14555 144 aa13.44□□□□□ -0.26
TMEM50B-210ENST00000542230 GPR183P32249 361 aa13.44□□□□□ -0.26
TMEM50B-210ENST00000542230 IGLV2-8P01709 118 aa13.44□□□□□ -0.26
TMEM50B-210ENST00000542230 TRGC2P03986 189 aa13.44□□□□□ -0.26
TMEM50B-210ENST00000542230 TEX38Q6PEX7 206 aa13.44□□□□□ -0.26
TMEM50B-210ENST00000542230 C1QL4Q86Z23 238 aa13.44□□□□□ -0.26
TMEM50B-210ENST00000542230 SHANK2-AS3Q9BTD1 123 aa13.44□□□□□ -0.26
TMEM50B-210ENST00000542230 THYN1Q9P016 225 aa13.44□□□□□ -0.26
TMEM50B-210ENST00000542230 A0A1W2PPQ1 181 aa13.43□□□□□ -0.26
TMEM50B-210ENST00000542230 A6NDX4 124 aa13.43□□□□□ -0.26
TMEM50B-210ENST00000542230 CLEC3BP05452 202 aa13.43□□□□□ -0.26
TMEM50B-210ENST00000542230 GNG4P50150 75 aa13.43□□□□□ -0.26
TMEM50B-210ENST00000542230 RAB5BP61020 215 aa13.43□□□□□ -0.26
TMEM50B-210ENST00000542230 SNRPEP62304 92 aaKnown RBP13.43□□□□□ -0.26
TMEM50B-210ENST00000542230 Q71RC1 249 aaPredicted RBP13.43□□□□□ -0.26
TMEM50B-210ENST00000542230 EXOC3-AS1Q8N2X6 119 aa13.43□□□□□ -0.26
TMEM50B-210ENST00000542230 IGF2BP2-AS1Q96M15 143 aa13.43□□□□□ -0.26
TMEM50B-210ENST00000542230 NF1P21359 2839 aa13.43□□□□□ -0.26
TMEM50B-210ENST00000542230 FASNP49327 2511 aaKnown RBP13.43□□□□□ -0.26
TMEM50B-210ENST00000542230 TRBV9A0A0B4J1U6 114 aa13.43□□□□□ -0.26
TMEM50B-210ENST00000542230 ISLRO14498 428 aa13.43□□□□□ -0.26
TMEM50B-210ENST00000542230 YPEL3P61236 119 aaPredicted RBP13.43□□□□□ -0.26
TMEM50B-210ENST00000542230 DEFB112Q30KQ8 113 aa13.43□□□□□ -0.26
TMEM50B-210ENST00000542230 KRTAP1-3Q8IUG1 177 aa13.43□□□□□ -0.26
TMEM50B-210ENST00000542230 ZNF502Q8TBZ5 544 aa13.43□□□□□ -0.26
TMEM50B-210ENST00000542230 CCDC140Q96MF4 163 aa13.43□□□□□ -0.26
TMEM50B-210ENST00000542230 RNASE7Q9H1E1 156 aaKnown RBP13.43□□□□□ -0.26
TMEM50B-210ENST00000542230 C9JCJ5 164 aa13.42□□□□□ -0.26
TMEM50B-210ENST00000542230 H3BRN7 92 aa13.42□□□□□ -0.26
TMEM50B-210ENST00000542230 IGHV4-31P0DP07 118 aa13.42□□□□□ -0.26
TMEM50B-210ENST00000542230 ANAPC16Q96DE5 110 aa13.42□□□□□ -0.26
TMEM50B-210ENST00000542230 Q96MF0 132 aa13.42□□□□□ -0.26
TMEM50B-210ENST00000542230 PEX7O00628 323 aa13.42□□□□□ -0.26
TMEM50B-210ENST00000542230 IGHV4-59P01825 116 aa13.42□□□□□ -0.26
TMEM50B-210ENST00000542230 SLC25A5P05141 298 aaKnown RBP13.42□□□□□ -0.26
TMEM50B-210ENST00000542230 CLEC19AQ6UXS0 136 aa13.42□□□□□ -0.26
TMEM50B-210ENST00000542230 LCNL1Q6ZST4 164 aa13.42□□□□□ -0.26
TMEM50B-210ENST00000542230 STXBP6Q8NFX7 210 aa13.42□□□□□ -0.26
TMEM50B-210ENST00000542230 Q9H3A6 140 aa13.42□□□□□ -0.26
TMEM50B-210ENST00000542230 TRBV24-1A0A075B6N3 115 aa13.41□□□□□ -0.26
TMEM50B-210ENST00000542230 TRAV41A0A0B4J266 112 aa13.41□□□□□ -0.26
TMEM50B-210ENST00000542230 ZNF98A6NK75 572 aa13.41□□□□□ -0.26
TMEM50B-210ENST00000542230 C19orf54Q5BKX5 351 aa13.41□□□□□ -0.26
TMEM50B-210ENST00000542230 ZNF48Q96MX3 618 aaPredicted RBP13.41□□□□□ -0.26
TMEM50B-210ENST00000542230 TRAV30A0A087WSZ9 112 aa13.4□□□□□ -0.26
TMEM50B-210ENST00000542230 LOXL1Q08397 574 aaPredicted RBP13.4□□□□□ -0.26
TMEM50B-210ENST00000542230 OR5B12Q96R08 314 aa13.4□□□□□ -0.26
TMEM50B-210ENST00000542230 EPDR1Q9UM22 224 aa13.4□□□□□ -0.26
TMEM50B-210ENST00000542230 MRPS12O15235 138 aaKnown RBP13.4□□□□□ -0.26
TMEM50B-210ENST00000542230 RPL15P61313 204 aaKnown RBP13.4□□□□□ -0.26
TMEM50B-210ENST00000542230 TMEM95Q3KNT9 176 aa13.4□□□□□ -0.26
TMEM50B-210ENST00000542230 ASCL2Q99929 193 aa13.4□□□□□ -0.26
TMEM50B-210ENST00000542230 PRELID1Q9Y255 219 aa13.4□□□□□ -0.26
TMEM50B-210ENST00000542230 NOTCH2Q04721 2471 aa13.4□□□□□ -0.26
TMEM50B-210ENST00000542230 MGST1P10620 155 aaKnown RBP13.39□□□□□ -0.27
TMEM50B-210ENST00000542230 GATA3P23771 443 aa13.39□□□□□ -0.27
TMEM50B-210ENST00000542230 OR10G8Q8NGN5 311 aa13.39□□□□□ -0.27
TMEM50B-210ENST00000542230 TRAV8-1A0A0A6YYK1 113 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms