RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 STPG4Q8N801 248 aa13.68□□□□□ -0.22
SPIDR-227ENST00000541342 TNFRSF14Q92956 283 aa13.68□□□□□ -0.22
SPIDR-227ENST00000541342 MRPL27Q9P0M9 148 aaKnown RBP13.68□□□□□ -0.22
SPIDR-227ENST00000541342 WASHC3Q9Y3C0 194 aa13.68□□□□□ -0.22
SPIDR-227ENST00000541342 IGHV3-72A0A0B4J1Y9 119 aa13.68□□□□□ -0.22
SPIDR-227ENST00000541342 LIPFP07098 398 aa13.68□□□□□ -0.22
SPIDR-227ENST00000541342 NTF3P20783 257 aa13.68□□□□□ -0.22
SPIDR-227ENST00000541342 MYCNOSP40205 109 aa13.68□□□□□ -0.22
SPIDR-227ENST00000541342 MFAP2P55001 183 aa13.68□□□□□ -0.22
SPIDR-227ENST00000541342 TNXAQ16473 311 aa13.68□□□□□ -0.22
SPIDR-227ENST00000541342 PRR31Q5SQ13 230 aa13.68□□□□□ -0.22
SPIDR-227ENST00000541342 PAXXQ9BUH6 204 aa13.68□□□□□ -0.22
SPIDR-227ENST00000541342 BUB1B-PAK6H3BSN5 160 aa13.67□□□□□ -0.22
SPIDR-227ENST00000541342 CORTO00230 105 aa13.67□□□□□ -0.22
SPIDR-227ENST00000541342 GNG5P63218 68 aa13.67□□□□□ -0.22
SPIDR-227ENST00000541342 NPIPB3Q92617 1050 aa13.67□□□□□ -0.22
SPIDR-227ENST00000541342 ZNF331Q9NQX6 463 aaPredicted RBP13.67□□□□□ -0.22
SPIDR-227ENST00000541342 NDUFB8O95169 186 aa13.67□□□□□ -0.22
SPIDR-227ENST00000541342 SSBP4Q9BWG4 385 aaPredicted RBP13.67□□□□□ -0.22
SPIDR-227ENST00000541342 COX7A2P2O60397 106 aa13.67□□□□□ -0.22
SPIDR-227ENST00000541342 PRB1P04280 392 aa13.67□□□□□ -0.22
SPIDR-227ENST00000541342 COL5A1-AS1Q5SY13 56 aa13.67□□□□□ -0.22
SPIDR-227ENST00000541342 C10orf113Q5VZT2 155 aa13.67□□□□□ -0.22
SPIDR-227ENST00000541342 RASL11AQ6T310 242 aa13.67□□□□□ -0.22
SPIDR-227ENST00000541342 UQCR10Q9UDW1 63 aa13.67□□□□□ -0.22
SPIDR-227ENST00000541342 UTP20O75691 2785 aaKnown RBP13.66□□□□□ -0.22
SPIDR-227ENST00000541342 GPR6P46095 362 aaPredicted RBP13.66□□□□□ -0.22
SPIDR-227ENST00000541342 ZFYVE26Q68DK2 2539 aa13.66□□□□□ -0.22
SPIDR-227ENST00000541342 AKAP6Q13023 2319 aa13.66□□□□□ -0.22
SPIDR-227ENST00000541342 USP9XQ93008 2570 aaPredicted RBP13.66□□□□□ -0.22
SPIDR-227ENST00000541342 TCRBV4S1A1TA0A5B7 111 aa13.66□□□□□ -0.22
SPIDR-227ENST00000541342 ARF6P62330 175 aa13.66□□□□□ -0.22
SPIDR-227ENST00000541342 ERHP84090 104 aaKnown RBP13.66□□□□□ -0.22
SPIDR-227ENST00000541342 EBLN2Q6P2I7 272 aa13.66□□□□□ -0.22
SPIDR-227ENST00000541342 C19orf35Q6ZS72 473 aa13.66□□□□□ -0.22
SPIDR-227ENST00000541342 LHFPL4Q7Z7J7 247 aa13.66□□□□□ -0.22
SPIDR-227ENST00000541342 GRAMD2BQ96HH9 432 aa13.66□□□□□ -0.22
SPIDR-227ENST00000541342 BBC3Q96PG8 261 aaPredicted RBP13.66□□□□□ -0.22
SPIDR-227ENST00000541342 A0A1W2PN81 502 aa13.66□□□□□ -0.22
SPIDR-227ENST00000541342 MRGPRG-AS1Q2M3A8 158 aa13.66□□□□□ -0.22
SPIDR-227ENST00000541342 LDLRAD2Q5SZI1 272 aa13.66□□□□□ -0.22
SPIDR-227ENST00000541342 TMEM167AQ8TBQ9 72 aa13.66□□□□□ -0.22
SPIDR-227ENST00000541342 ZNF430Q9H8G1 570 aaPredicted RBP13.66□□□□□ -0.22
SPIDR-227ENST00000541342 PRR27Q6MZM9 219 aa13.65□□□□□ -0.22
SPIDR-227ENST00000541342 URB1-AS1Q96HZ7 61 aa13.65□□□□□ -0.22
SPIDR-227ENST00000541342 SGK494Q96LW2 274 aa13.65□□□□□ -0.22
SPIDR-227ENST00000541342 ALKBH7Q9BT30 221 aaPredicted RBP13.65□□□□□ -0.22
SPIDR-227ENST00000541342 TPSG1Q9NRR2 321 aa13.65□□□□□ -0.22
SPIDR-227ENST00000541342 LOC105371242A0A075B767 164 aa13.65□□□□□ -0.22
SPIDR-227ENST00000541342 HIGD1CA8MV81 97 aa13.65□□□□□ -0.22
SPIDR-227ENST00000541342 KLF5Q13887 457 aaPredicted RBP13.65□□□□□ -0.22
SPIDR-227ENST00000541342 SPATA12Q7Z6I5 190 aa13.65□□□□□ -0.22
SPIDR-227ENST00000541342 THAP8Q8NA92 274 aa13.65□□□□□ -0.22
SPIDR-227ENST00000541342 TNFRSF19Q9NS68 423 aa13.65□□□□□ -0.22
SPIDR-227ENST00000541342 ZFP30Q9Y2G7 519 aa13.65□□□□□ -0.22
SPIDR-227ENST00000541342 CSMD1Q96PZ7 3565 aa13.65□□□□□ -0.22
SPIDR-227ENST00000541342 SPTAN1Q13813 2472 aaKnown RBP13.64□□□□□ -0.23
SPIDR-227ENST00000541342 IGHV1-3A0A0C4DH29 117 aa13.64□□□□□ -0.23
SPIDR-227ENST00000541342 LINC00614P0C842 121 aa13.64□□□□□ -0.23
SPIDR-227ENST00000541342 MC5RP33032 325 aa13.64□□□□□ -0.23
SPIDR-227ENST00000541342 EFNA4P52798 201 aa13.64□□□□□ -0.23
SPIDR-227ENST00000541342 Q6ZN92 141 aa13.64□□□□□ -0.23
SPIDR-227ENST00000541342 A0A1B0GXF2 115 aa13.64□□□□□ -0.23
SPIDR-227ENST00000541342 FAM181BA6NEQ2 426 aa13.64□□□□□ -0.23
SPIDR-227ENST00000541342 LY6LH3BQJ8 138 aa13.64□□□□□ -0.23
SPIDR-227ENST00000541342 LINC00322Q6ZN03 302 aaPredicted RBP13.64□□□□□ -0.23
SPIDR-227ENST00000541342 KIR3DL3Q8N743 410 aa13.64□□□□□ -0.23
SPIDR-227ENST00000541342 ENSAO43768 121 aaKnown RBP13.64□□□□□ -0.23
SPIDR-227ENST00000541342 OR2J3O76001 311 aa13.64□□□□□ -0.23
SPIDR-227ENST00000541342 ZFP36P26651 326 aaKnown RBP13.64□□□□□ -0.23
SPIDR-227ENST00000541342 LINC00305Q7Z4B0 112 aa13.64□□□□□ -0.23
SPIDR-227ENST00000541342 LAMTOR2Q9Y2Q5 125 aa13.64□□□□□ -0.23
SPIDR-227ENST00000541342 DOPEY1Q5JWR5 2465 aa13.63□□□□□ -0.23
SPIDR-227ENST00000541342 SLC25A17O43808 307 aa13.63□□□□□ -0.23
SPIDR-227ENST00000541342 BORCS7Q96B45 105 aa13.63□□□□□ -0.23
SPIDR-227ENST00000541342 ABCA1O95477 2261 aa13.63□□□□□ -0.23
SPIDR-227ENST00000541342 CRYBG3Q68DQ2 2970 aa13.63□□□□□ -0.23
SPIDR-227ENST00000541342 C2orf70A6NJV1 201 aa13.63□□□□□ -0.23
SPIDR-227ENST00000541342 OVOL3O00110 214 aa13.63□□□□□ -0.23
SPIDR-227ENST00000541342 CNTFRP26992 372 aa13.63□□□□□ -0.23
SPIDR-227ENST00000541342 OR1L4Q8NGR5 311 aa13.63□□□□□ -0.23
SPIDR-227ENST00000541342 OR4A5Q8NH83 315 aa13.63□□□□□ -0.23
SPIDR-227ENST00000541342 TXN2Q99757 166 aa13.63□□□□□ -0.23
SPIDR-227ENST00000541342 INSIG2Q9Y5U4 225 aa13.63□□□□□ -0.23
SPIDR-227ENST00000541342 A0A1W2PPI3 338 aa13.62□□□□□ -0.23
SPIDR-227ENST00000541342 MOSP00540 346 aa13.62□□□□□ -0.23
SPIDR-227ENST00000541342 CAMPP49913 170 aa13.62□□□□□ -0.23
SPIDR-227ENST00000541342 KLRD1Q13241 179 aa13.62□□□□□ -0.23
SPIDR-227ENST00000541342 DMRTA1Q5VZB9 504 aa13.62□□□□□ -0.23
SPIDR-227ENST00000541342 HCP5Q6MZN7 132 aa13.62□□□□□ -0.23
SPIDR-227ENST00000541342 VSTM2AQ8TAG5 236 aa13.62□□□□□ -0.23
SPIDR-227ENST00000541342 MLST8Q9BVC4 326 aa13.62□□□□□ -0.23
SPIDR-227ENST00000541342 TSPOP30536 169 aa13.61□□□□□ -0.23
SPIDR-227ENST00000541342 HNRNPA3P51991 378 aaKnown RBP13.61□□□□□ -0.23
SPIDR-227ENST00000541342 BPIFB3P59826 476 aa13.61□□□□□ -0.23
SPIDR-227ENST00000541342 EPDR1Q9UM22 224 aa13.61□□□□□ -0.23
SPIDR-227ENST00000541342 KLF12Q9Y4X4 402 aa13.61□□□□□ -0.23
SPIDR-227ENST00000541342 M0R1W7 72 aa13.61□□□□□ -0.23
SPIDR-227ENST00000541342 CD24P25063 80 aa13.61□□□□□ -0.23
SPIDR-227ENST00000541342 FAM120AOSQ5T036 256 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms