RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 IGKV3OR2-268A0A0C4DH90 116 aa12.27□□□□□ -0.44
SMARCA4-207ENST00000541122 LINC00473A8K010 186 aa12.27□□□□□ -0.44
SMARCA4-207ENST00000541122 TP53BP1Q12888 1972 aaPredicted RBP12.27□□□□□ -0.45
SMARCA4-207ENST00000541122 TRAV8-1A0A0A6YYK1 113 aa12.27□□□□□ -0.45
SMARCA4-207ENST00000541122 GGTLC3B5MD39 225 aa12.27□□□□□ -0.45
SMARCA4-207ENST00000541122 SH2D1AO60880 128 aa12.27□□□□□ -0.45
SMARCA4-207ENST00000541122 CRIPAKQ8N1N5 446 aa12.27□□□□□ -0.45
SMARCA4-207ENST00000541122 EXOC3-AS1Q8N2X6 119 aa12.27□□□□□ -0.45
SMARCA4-207ENST00000541122 TRAV12-3A0A0B4J271 114 aa12.27□□□□□ -0.45
SMARCA4-207ENST00000541122 C5orf63A6NC05 138 aa12.27□□□□□ -0.45
SMARCA4-207ENST00000541122 C2orf82Q6UX34 121 aa12.27□□□□□ -0.45
SMARCA4-207ENST00000541122 C9orf106Q8NAJ2 232 aa12.27□□□□□ -0.45
SMARCA4-207ENST00000541122 SCRT1Q9BWW7 348 aa12.27□□□□□ -0.45
SMARCA4-207ENST00000541122 TRGV11A0A075B6L2 103 aa12.26□□□□□ -0.45
SMARCA4-207ENST00000541122 F8W1H4 67 aa12.26□□□□□ -0.45
SMARCA4-207ENST00000541122 PPIFP30405 207 aaKnown RBP12.26□□□□□ -0.45
SMARCA4-207ENST00000541122 PAX9P55771 341 aa12.26□□□□□ -0.45
SMARCA4-207ENST00000541122 FAM27E3Q08E93 113 aa12.26□□□□□ -0.45
SMARCA4-207ENST00000541122 LY6EQ16553 131 aa12.26□□□□□ -0.45
SMARCA4-207ENST00000541122 TRAV3A0A0B4J244 114 aa12.26□□□□□ -0.45
SMARCA4-207ENST00000541122 COA6Q5JTJ3 125 aaKnown RBP12.26□□□□□ -0.45
SMARCA4-207ENST00000541122 FDCSPQ8NFU4 85 aa12.26□□□□□ -0.45
SMARCA4-207ENST00000541122 RALGAPA1Q6GYQ0 2036 aa12.26□□□□□ -0.45
SMARCA4-207ENST00000541122 K7EP13 123 aa12.26□□□□□ -0.45
SMARCA4-207ENST00000541122 BSPH1Q075Z2 132 aa12.26□□□□□ -0.45
SMARCA4-207ENST00000541122 ATP1A1-AS1Q5TC04 95 aa12.26□□□□□ -0.45
SMARCA4-207ENST00000541122 TMEM158Q8WZ71 300 aa12.26□□□□□ -0.45
SMARCA4-207ENST00000541122 C1orf147Q96MC9 270 aaPredicted RBP12.26□□□□□ -0.45
SMARCA4-207ENST00000541122 COX8AP10176 69 aa12.25□□□□□ -0.45
SMARCA4-207ENST00000541122 OVOL2Q9BRP0 275 aa12.25□□□□□ -0.45
SMARCA4-207ENST00000541122 TRBV20-1A0A075B6N2 111 aa12.25□□□□□ -0.45
SMARCA4-207ENST00000541122 KIR2DL5BA0A0G2JN68 375 aa12.25□□□□□ -0.45
SMARCA4-207ENST00000541122 KIR2DL5BA0A0G2JPC4 375 aa12.25□□□□□ -0.45
SMARCA4-207ENST00000541122 A0A1B0GUS0 222 aa12.25□□□□□ -0.45
SMARCA4-207ENST00000541122 ZNF726P1Q15940 193 aa12.25□□□□□ -0.45
SMARCA4-207ENST00000541122 KIR2DL5AQ8N109 375 aa12.25□□□□□ -0.45
SMARCA4-207ENST00000541122 DPH3P1Q9H4G8 78 aa12.25□□□□□ -0.45
SMARCA4-207ENST00000541122 IGHV1-18A0A0C4DH31 117 aa12.25□□□□□ -0.45
SMARCA4-207ENST00000541122 MYOD1P15172 320 aa12.25□□□□□ -0.45
SMARCA4-207ENST00000541122 S100A7L2Q5SY68 101 aa12.25□□□□□ -0.45
SMARCA4-207ENST00000541122 VOPP1Q96AW1 172 aa12.25□□□□□ -0.45
SMARCA4-207ENST00000541122 RNASE2P10153 161 aaKnown RBP12.25□□□□□ -0.45
SMARCA4-207ENST00000541122 IL15RAQ13261 267 aa12.25□□□□□ -0.45
SMARCA4-207ENST00000541122 IGKV2-40A0A087WW87 121 aaPredicted RBP12.25□□□□□ -0.45
SMARCA4-207ENST00000541122 IGKV2D-40P01614 121 aaPredicted RBP12.25□□□□□ -0.45
SMARCA4-207ENST00000541122 LGALS1P09382 135 aaKnown RBP12.25□□□□□ -0.45
SMARCA4-207ENST00000541122 TFF1P04155 84 aa12.24□□□□□ -0.45
SMARCA4-207ENST00000541122 TOMM7Q9P0U1 55 aa12.24□□□□□ -0.45
SMARCA4-207ENST00000541122 CDKN1BP46527 198 aa12.24□□□□□ -0.45
SMARCA4-207ENST00000541122 V9GYV3 84 aa12.24□□□□□ -0.45
SMARCA4-207ENST00000541122 IGHV3OR16-8A0A075B7F1 116 aa12.24□□□□□ -0.45
SMARCA4-207ENST00000541122 EPOPA6NHQ4 379 aa12.24□□□□□ -0.45
SMARCA4-207ENST00000541122 TNFRSF6BO95407 300 aa12.24□□□□□ -0.45
SMARCA4-207ENST00000541122 ZNF138P52744 262 aa12.24□□□□□ -0.45
SMARCA4-207ENST00000541122 KLHDC3Q9BQ90 382 aa12.24□□□□□ -0.45
SMARCA4-207ENST00000541122 KLF12Q9Y4X4 402 aa12.24□□□□□ -0.45
SMARCA4-207ENST00000541122 MLNRO43193 412 aa12.24□□□□□ -0.45
SMARCA4-207ENST00000541122 PDE6HQ13956 83 aa12.24□□□□□ -0.45
SMARCA4-207ENST00000541122 CD177Q8N6Q3 437 aa12.24□□□□□ -0.45
SMARCA4-207ENST00000541122 SMIM27A0A1W2PRY6 76 aa12.23□□□□□ -0.45
SMARCA4-207ENST00000541122 C11orf52Q96A22 123 aa12.23□□□□□ -0.45
SMARCA4-207ENST00000541122 VCYO14598 125 aa12.23□□□□□ -0.45
SMARCA4-207ENST00000541122 IGLL1P15814 213 aa12.23□□□□□ -0.45
SMARCA4-207ENST00000541122 C10orf55Q5SWW7 151 aa12.23□□□□□ -0.45
SMARCA4-207ENST00000541122 SLC25A20O43772 301 aa12.23□□□□□ -0.45
SMARCA4-207ENST00000541122 LGALS9BQ3B8N2 356 aa12.23□□□□□ -0.45
SMARCA4-207ENST00000541122 LGALS9CQ6DKI2 356 aa12.23□□□□□ -0.45
SMARCA4-207ENST00000541122 C17orf82Q86X59 251 aaPredicted RBP12.23□□□□□ -0.45
SMARCA4-207ENST00000541122 PPDPFLQ8WWR9 84 aa12.23□□□□□ -0.45
SMARCA4-207ENST00000541122 SPAG8Q99932 426 aaPredicted RBP12.23□□□□□ -0.45
SMARCA4-207ENST00000541122 ZNF581Q9P0T4 197 aa12.23□□□□□ -0.45
SMARCA4-207ENST00000541122 C9orf172C9J069 976 aa12.23□□□□□ -0.45
SMARCA4-207ENST00000541122 H0YJW9 148 aa12.23□□□□□ -0.45
SMARCA4-207ENST00000541122 VDAC2P45880 294 aaPredicted RBP12.23□□□□□ -0.45
SMARCA4-207ENST00000541122 CFAP161Q6P656 301 aa12.23□□□□□ -0.45
SMARCA4-207ENST00000541122 IGHV1-46P01743 117 aa12.22□□□□□ -0.45
SMARCA4-207ENST00000541122 SRSF8Q9BRL6 282 aaKnown RBP12.22□□□□□ -0.45
SMARCA4-207ENST00000541122 SIGLEC15Q6ZMC9 328 aa12.22□□□□□ -0.45
SMARCA4-207ENST00000541122 AMN1Q8IY45 258 aa12.22□□□□□ -0.45
SMARCA4-207ENST00000541122 TMEM75Q8N9X5 138 aa12.22□□□□□ -0.45
SMARCA4-207ENST00000541122 ZSWIM8A7E2V4 1837 aa12.22□□□□□ -0.45
SMARCA4-207ENST00000541122 IGHV1-24A0A0C4DH33 117 aa12.22□□□□□ -0.45
SMARCA4-207ENST00000541122 IGKV1-6A0A0C4DH72 117 aa12.22□□□□□ -0.45
SMARCA4-207ENST00000541122 SIVA1O15304 175 aa12.22□□□□□ -0.45
SMARCA4-207ENST00000541122 C9orf139Q6ZV77 190 aa12.22□□□□□ -0.45
SMARCA4-207ENST00000541122 TSSC4Q9Y5U2 329 aaPredicted RBP12.22□□□□□ -0.45
SMARCA4-207ENST00000541122 TIMM23O14925 209 aa12.21□□□□□ -0.45
SMARCA4-207ENST00000541122 TAL2Q16559 108 aa12.21□□□□□ -0.45
SMARCA4-207ENST00000541122 SBF1O95248 1867 aa12.21□□□□□ -0.45
SMARCA4-207ENST00000541122 STPG4Q8N801 248 aa12.21□□□□□ -0.46
SMARCA4-207ENST00000541122 ATP6V0BQ99437 205 aa12.21□□□□□ -0.46
SMARCA4-207ENST00000541122 DOCK3Q8IZD9 2030 aa12.21□□□□□ -0.46
SMARCA4-207ENST00000541122 LINC01587Q99440 93 aa12.21□□□□□ -0.46
SMARCA4-207ENST00000541122 MPDZO75970 2070 aa12.2□□□□□ -0.46
SMARCA4-207ENST00000541122 SLAQ13239 276 aa12.2□□□□□ -0.46
SMARCA4-207ENST00000541122 C20orf204Q6ZNR8 217 aa12.2□□□□□ -0.46
SMARCA4-207ENST00000541122 NEGR1Q7Z3B1 354 aa12.2□□□□□ -0.46
SMARCA4-207ENST00000541122 CENPVQ7Z7K6 275 aaPredicted RBP12.2□□□□□ -0.46
SMARCA4-207ENST00000541122 PINLYPA6NC86 204 aa12.2□□□□□ -0.46
SMARCA4-207ENST00000541122 OOSP1A8MZH6 123 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms