RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 NAA38Q9BRA0 125 aaKnown RBP8.29□□□□□ -1.08
CDC42SE1-207ENST00000540998 TMEM70Q9BUB7 260 aa8.29□□□□□ -1.08
CDC42SE1-207ENST00000540998 MRPL32Q9BYC8 188 aaKnown RBP8.29□□□□□ -1.08
CDC42SE1-207ENST00000540998 MRPL27Q9P0M9 148 aaKnown RBP8.29□□□□□ -1.08
CDC42SE1-207ENST00000540998 S100A7P31151 101 aa8.29□□□□□ -1.08
CDC42SE1-207ENST00000540998 MRGPRG-AS1Q2M3A8 158 aa8.29□□□□□ -1.08
CDC42SE1-207ENST00000540998 PLA2G2CQ5R387 149 aa8.29□□□□□ -1.08
CDC42SE1-207ENST00000540998 BCL6BQ8N143 479 aaPredicted RBP8.29□□□□□ -1.08
CDC42SE1-207ENST00000540998 RPP21Q9H633 154 aaKnown RBP8.29□□□□□ -1.08
CDC42SE1-207ENST00000540998 HRNRQ86YZ3 2850 aaPredicted RBP8.29□□□□□ -1.08
CDC42SE1-207ENST00000540998 NKX6-3A6NJ46 265 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 FNDC10F2Z333 226 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 LYNX1G3V0Z9 82 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 P01737 135 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 LYNX1P0DP58 116 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 HIST1H1EP10412 219 aaKnown RBP8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 LYZP61626 148 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 HBBP68871 147 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 UBE2V1Q13404 147 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 FBLN7Q53RD9 439 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 GOLT1AQ6ZVE7 132 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 TMEM116Q8NCL8 245 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 OR5AN1Q8NGI8 311 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 Q9H3A6 140 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 CTSZQ9UBR2 303 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 SSUH2Q9Y2M2 353 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 TMSB15BA0A087X1C1 80 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 NCR2O95944 276 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 CD40P25942 277 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 MYCNOSP40205 109 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 TIMM23BQ5SRD1 257 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 ZNF738Q8NE65 137 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 WIPF2Q8TF74 440 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 TMUB1Q9BVT8 246 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 SYS1-DBNDD2H3BUS1 97 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 ITGB1BP1O14713 200 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 LEPROTL1O95214 131 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 BPIFB3P59826 476 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 MUC15Q8N387 334 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 OR4C5Q8NGB2 326 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 OSR1Q8TAX0 266 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 ORAOV1Q8WV07 137 aa8.28□□□□□ -1.08
CDC42SE1-207ENST00000540998 ANKHD1Q8IWZ3 2542 aaKnown RBP8.27□□□□□ -1.09
CDC42SE1-207ENST00000540998 TMEM265A0A087WTH1 108 aa8.27□□□□□ -1.09
CDC42SE1-207ENST00000540998 PSG1P11464 419 aa8.27□□□□□ -1.09
CDC42SE1-207ENST00000540998 LOXL1Q08397 574 aaPredicted RBP8.27□□□□□ -1.09
CDC42SE1-207ENST00000540998 KLF5Q13887 457 aaPredicted RBP8.27□□□□□ -1.09
CDC42SE1-207ENST00000540998 FAM231DQ6ZW35 169 aa8.27□□□□□ -1.09
CDC42SE1-207ENST00000540998 OR4C13Q8NGP0 309 aa8.27□□□□□ -1.09
CDC42SE1-207ENST00000540998 CACNG8Q8WXS5 425 aa8.27□□□□□ -1.09
CDC42SE1-207ENST00000540998 GPR82Q96P67 336 aa8.27□□□□□ -1.09
CDC42SE1-207ENST00000540998 LINC00312Q9Y6C7 94 aa8.27□□□□□ -1.09
CDC42SE1-207ENST00000540998 ZNF785A8K8V0 405 aa8.27□□□□□ -1.09
CDC42SE1-207ENST00000540998 PRSS33Q8NF86 280 aa8.27□□□□□ -1.09
CDC42SE1-207ENST00000540998 OR1L4Q8NGR5 311 aa8.27□□□□□ -1.09
CDC42SE1-207ENST00000540998 MRPS16Q9Y3D3 137 aaKnown RBP8.27□□□□□ -1.09
CDC42SE1-207ENST00000540998 LOC389332A0A1B0GUA5 103 aa8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 MBD3L4A6NDZ8 208 aaPredicted RBP8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 MBD3L3A6NE82 208 aaPredicted RBP8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 MBD3L5A6NJ08 208 aaPredicted RBP8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 OR2J3O76001 311 aa8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 TCRAP04437 139 aa8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 ARMS2P0C7Q2 107 aa8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 GP9P14770 177 aa8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 COL8A1P27658 744 aa8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 GATA4P43694 442 aa8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 MBD3L2Q8NHZ7 208 aaPredicted RBP8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 TMEM167AQ8TBQ9 72 aa8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 MLST8Q9BVC4 326 aa8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 C19orf24Q9BVV8 132 aa8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 PPP1R14DQ9NXH3 145 aa8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 SPTAN1Q13813 2472 aaKnown RBP8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 IGHV1-69-2A0A0G2JMI3 117 aa8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 CHEK1O14757 476 aa8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 TNFSF4P23510 183 aa8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 COX19Q49B96 90 aa8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 WFDC3Q8IUB2 231 aa8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 M0R3E3 92 aa8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 TAX1BP3O14907 124 aa8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 CRYABP02511 175 aaKnown RBP8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 UQCRFS1P47985 274 aa8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 ADIPOQQ15848 244 aa8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 KLF17Q5JT82 389 aaPredicted RBP8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 DAZAP1Q96EP5 407 aaKnown RBP8.26□□□□□ -1.09
CDC42SE1-207ENST00000540998 M0R296 226 aa8.25□□□□□ -1.09
CDC42SE1-207ENST00000540998 RBP4P02753 201 aa8.25□□□□□ -1.09
CDC42SE1-207ENST00000540998 LDLRAD2Q5SZI1 272 aa8.25□□□□□ -1.09
CDC42SE1-207ENST00000540998 AMMECR1LQ6DCA0 310 aa8.25□□□□□ -1.09
CDC42SE1-207ENST00000540998 ZADH2Q8N4Q0 377 aa8.25□□□□□ -1.09
CDC42SE1-207ENST00000540998 GAL3ST2Q9H3Q3 398 aa8.25□□□□□ -1.09
CDC42SE1-207ENST00000540998 IGHV3OR16-8A0A075B7F1 116 aa8.25□□□□□ -1.09
CDC42SE1-207ENST00000540998 TOMM40O96008 361 aa8.25□□□□□ -1.09
CDC42SE1-207ENST00000540998 COX7A1P24310 79 aa8.25□□□□□ -1.09
CDC42SE1-207ENST00000540998 BSPH1Q075Z2 132 aa8.25□□□□□ -1.09
CDC42SE1-207ENST00000540998 SRSF12Q8WXF0 261 aaKnown RBP8.25□□□□□ -1.09
CDC42SE1-207ENST00000540998 PERPQ96FX8 193 aa8.25□□□□□ -1.09
CDC42SE1-207ENST00000540998 FBXL15Q9H469 300 aa8.25□□□□□ -1.09
CDC42SE1-207ENST00000540998 RALYQ9UKM9 306 aaKnown RBP8.25□□□□□ -1.09
CDC42SE1-207ENST00000540998 VPS13CQ709C8 3753 aa8.25□□□□□ -1.09
CDC42SE1-207ENST00000540998 C19orf71A6NCJ1 209 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms