RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 BEND2Q8NDZ0 799 aa11.29□□□□□ -0.6
INO80E-203ENST00000540562 TMEM167AQ8TBQ9 72 aa11.29□□□□□ -0.6
INO80E-203ENST00000540562 OR8B2Q96RD0 313 aa11.29□□□□□ -0.6
INO80E-203ENST00000540562 IGLC7A0M8Q6 106 aa11.29□□□□□ -0.6
INO80E-203ENST00000540562 PSG1P11464 419 aa11.29□□□□□ -0.6
INO80E-203ENST00000540562 FBLN7Q53RD9 439 aa11.29□□□□□ -0.6
INO80E-203ENST00000540562 Q8NA96 180 aa11.29□□□□□ -0.6
INO80E-203ENST00000540562 IZUMO1RA6ND01 250 aa11.29□□□□□ -0.6
INO80E-203ENST00000540562 M0R3E3 92 aa11.29□□□□□ -0.6
INO80E-203ENST00000540562 RAB4AP20338 218 aa11.29□□□□□ -0.6
INO80E-203ENST00000540562 DNLZQ5SXM8 178 aa11.29□□□□□ -0.6
INO80E-203ENST00000540562 RPEQ96AT9 228 aa11.29□□□□□ -0.6
INO80E-203ENST00000540562 MIEN1Q9BRT3 115 aa11.29□□□□□ -0.6
INO80E-203ENST00000540562 Q9H3A6 140 aa11.29□□□□□ -0.6
INO80E-203ENST00000540562 WDR73Q6P4I2 378 aa11.28□□□□□ -0.6
INO80E-203ENST00000540562 EPDR1Q9UM22 224 aa11.28□□□□□ -0.6
INO80E-203ENST00000540562 IGHV2-26A0A0B4J1V2 119 aa11.28□□□□□ -0.6
INO80E-203ENST00000540562 SMIM27A0A1W2PRY6 76 aa11.28□□□□□ -0.6
INO80E-203ENST00000540562 ITGB1BP1O14713 200 aa11.28□□□□□ -0.6
INO80E-203ENST00000540562 SNAI2O43623 268 aa11.28□□□□□ -0.6
INO80E-203ENST00000540562 HLA-DQA1P01909 254 aa11.28□□□□□ -0.6
INO80E-203ENST00000540562 TEX43Q6ZNM6 134 aa11.28□□□□□ -0.6
INO80E-203ENST00000540562 VSTM2AQ8TAG5 236 aa11.28□□□□□ -0.6
INO80E-203ENST00000540562 HYPMO75409 117 aa11.27□□□□□ -0.6
INO80E-203ENST00000540562 RPLP1P05386 114 aaKnown RBP11.27□□□□□ -0.6
INO80E-203ENST00000540562 SPATA12Q7Z6I5 190 aa11.27□□□□□ -0.6
INO80E-203ENST00000540562 Q8N976 141 aa11.27□□□□□ -0.6
INO80E-203ENST00000540562 OR1L4Q8NGR5 311 aa11.27□□□□□ -0.6
INO80E-203ENST00000540562 TMEM186Q96B77 213 aa11.27□□□□□ -0.6
INO80E-203ENST00000540562 DAZAP1Q96EP5 407 aaKnown RBP11.27□□□□□ -0.6
INO80E-203ENST00000540562 TMEM208Q9BTX3 173 aa11.27□□□□□ -0.6
INO80E-203ENST00000540562 TMEM133Q9H2Q1 129 aa11.27□□□□□ -0.6
INO80E-203ENST00000540562 EBLN2Q6P2I7 272 aa11.27□□□□□ -0.61
INO80E-203ENST00000540562 IGFL3Q6UXB1 125 aa11.27□□□□□ -0.61
INO80E-203ENST00000540562 P01737 135 aa11.27□□□□□ -0.61
INO80E-203ENST00000540562 COL8A1P27658 744 aa11.27□□□□□ -0.61
INO80E-203ENST00000540562 Q0VG73 95 aa11.27□□□□□ -0.61
INO80E-203ENST00000540562 CDSNQ15517 529 aa11.27□□□□□ -0.61
INO80E-203ENST00000540562 LDLRAD2Q5SZI1 272 aa11.27□□□□□ -0.61
INO80E-203ENST00000540562 C11orf42Q8N5U0 333 aa11.27□□□□□ -0.61
INO80E-203ENST00000540562 GTSF1Q8WW33 167 aa11.27□□□□□ -0.61
INO80E-203ENST00000540562 CACNG8Q8WXS5 425 aa11.27□□□□□ -0.61
INO80E-203ENST00000540562 C22orf15Q8WYQ4 148 aa11.27□□□□□ -0.61
INO80E-203ENST00000540562 IGHV3OR16-13A0A075B7E8 117 aa11.26□□□□□ -0.61
INO80E-203ENST00000540562 IGHV3-74A0A0B4J1X5 117 aa11.26□□□□□ -0.61
INO80E-203ENST00000540562 SHISA9B4DS77 424 aa11.26□□□□□ -0.61
INO80E-203ENST00000540562 HNRNPA3P51991 378 aaKnown RBP11.26□□□□□ -0.61
INO80E-203ENST00000540562 TCF15Q12870 199 aa11.26□□□□□ -0.61
INO80E-203ENST00000540562 PERPQ96FX8 193 aa11.26□□□□□ -0.61
INO80E-203ENST00000540562 MRPL32Q9BYC8 188 aaKnown RBP11.26□□□□□ -0.61
INO80E-203ENST00000540562 CSPG4Q6UVK1 2322 aa11.26□□□□□ -0.61
INO80E-203ENST00000540562 C21orf62-AS1Q17RA5 79 aa11.26□□□□□ -0.61
INO80E-203ENST00000540562 MRGPRG-AS1Q2M3A8 158 aa11.26□□□□□ -0.61
INO80E-203ENST00000540562 TMEM155Q4W5P6 130 aa11.26□□□□□ -0.61
INO80E-203ENST00000540562 STPG4Q8N801 248 aa11.26□□□□□ -0.61
INO80E-203ENST00000540562 NUP37Q8NFH4 326 aa11.26□□□□□ -0.61
INO80E-203ENST00000540562 SRSF12Q8WXF0 261 aaKnown RBP11.26□□□□□ -0.61
INO80E-203ENST00000540562 LPAR2Q9HBW0 351 aa11.26□□□□□ -0.61
INO80E-203ENST00000540562 ARL2-SNX15V9GYD0 113 aa11.26□□□□□ -0.61
INO80E-203ENST00000540562 CREBBPQ92793 2442 aa11.25□□□□□ -0.61
INO80E-203ENST00000540562 PPIAL4CA0A0B4J2A2 164 aa11.25□□□□□ -0.61
INO80E-203ENST00000540562 IGHV1-3A0A0C4DH29 117 aa11.25□□□□□ -0.61
INO80E-203ENST00000540562 PPIAL4GP0DN37 164 aa11.25□□□□□ -0.61
INO80E-203ENST00000540562 MEF2CQ06413 473 aaPredicted RBP11.25□□□□□ -0.61
INO80E-203ENST00000540562 PPP1R27Q86WC6 154 aa11.25□□□□□ -0.61
INO80E-203ENST00000540562 SIGLEC9Q9Y336 463 aa11.25□□□□□ -0.61
INO80E-203ENST00000540562 CRYBG3Q68DQ2 2970 aa11.25□□□□□ -0.61
INO80E-203ENST00000540562 TIMM23O14925 209 aa11.25□□□□□ -0.61
INO80E-203ENST00000540562 DMRTA1Q5VZB9 504 aa11.25□□□□□ -0.61
INO80E-203ENST00000540562 SSX8Q7RTT4 187 aa11.25□□□□□ -0.61
INO80E-203ENST00000540562 hDV102S1A0JD36 115 aa11.24□□□□□ -0.61
INO80E-203ENST00000540562 NCBP2LA6PVI3 153 aaKnown RBP11.24□□□□□ -0.61
INO80E-203ENST00000540562 MT-ND6P03923 174 aa11.24□□□□□ -0.61
INO80E-203ENST00000540562 RNF2Q99496 336 aa11.24□□□□□ -0.61
INO80E-203ENST00000540562 DOPEY2Q9Y3R5 2298 aa11.24□□□□□ -0.61
INO80E-203ENST00000540562 FCGR2BP31994 310 aaPredicted RBP11.24□□□□□ -0.61
INO80E-203ENST00000540562 UNQ5815/PRO19632Q6UWF5 114 aa11.24□□□□□ -0.61
INO80E-203ENST00000540562 RASL11BQ9BPW5 248 aa11.24□□□□□ -0.61
INO80E-203ENST00000540562 CSMD2Q7Z408 3487 aa11.24□□□□□ -0.61
INO80E-203ENST00000540562 LOC389332A0A1B0GUA5 103 aa11.24□□□□□ -0.61
INO80E-203ENST00000540562 HIST1H1EP10412 219 aaKnown RBP11.24□□□□□ -0.61
INO80E-203ENST00000540562 MUC15Q8N387 334 aa11.24□□□□□ -0.61
INO80E-203ENST00000540562 MBD6Q96DN6 1003 aa11.24□□□□□ -0.61
INO80E-203ENST00000540562 LY96Q9Y6Y9 160 aa11.24□□□□□ -0.61
INO80E-203ENST00000540562 CHEK1O14757 476 aa11.23□□□□□ -0.61
INO80E-203ENST00000540562 TCF21O43680 179 aa11.23□□□□□ -0.61
INO80E-203ENST00000540562 FSTL3O95633 263 aa11.23□□□□□ -0.61
INO80E-203ENST00000540562 IL4P05112 153 aa11.23□□□□□ -0.61
INO80E-203ENST00000540562 GRAMD2BQ96HH9 432 aa11.23□□□□□ -0.61
INO80E-203ENST00000540562 HIGD1AQ9Y241 93 aa11.23□□□□□ -0.61
INO80E-203ENST00000540562 IGHV3-66A0A0C4DH42 116 aa11.23□□□□□ -0.61
INO80E-203ENST00000540562 FAM181BA6NEQ2 426 aa11.23□□□□□ -0.61
INO80E-203ENST00000540562 TCRAP04437 139 aa11.23□□□□□ -0.61
INO80E-203ENST00000540562 GPR82Q96P67 336 aa11.23□□□□□ -0.61
INO80E-203ENST00000540562 LINC00574Q9H8X3 128 aa11.23□□□□□ -0.61
INO80E-203ENST00000540562 SERTM2A0A1B0GWG4 89 aa11.22□□□□□ -0.61
INO80E-203ENST00000540562 VSTM5A8MXK1 200 aa11.22□□□□□ -0.61
INO80E-203ENST00000540562 CD3EP07766 207 aa11.22□□□□□ -0.61
INO80E-203ENST00000540562 TMEM11P17152 192 aa11.22□□□□□ -0.61
INO80E-203ENST00000540562 ALKBH7Q9BT30 221 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms