RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 SHANK2-AS3Q9BTD1 123 aa9.16□□□□□ -0.94
VTN-202ENST00000539746 SLC25A22Q9H936 323 aa9.16□□□□□ -0.94
VTN-202ENST00000539746 MRPL27Q9P0M9 148 aaKnown RBP9.16□□□□□ -0.94
VTN-202ENST00000539746 LINC00527Q9UJ94 153 aa9.16□□□□□ -0.94
VTN-202ENST00000539746 PUS1Q9Y606 427 aaKnown RBP eCLIP9.16□□□□□ -0.94
VTN-202ENST00000539746 CSMD2Q7Z408 3487 aa9.16□□□□□ -0.94
VTN-202ENST00000539746 TNCP24821 2201 aa9.15□□□□□ -0.94
VTN-202ENST00000539746 IGHV3-21A0A0B4J1V1 117 aa9.15□□□□□ -0.94
VTN-202ENST00000539746 RBFOX3A6NFN3 312 aa9.15□□□□□ -0.94
VTN-202ENST00000539746 FBLL1A6NHQ2 334 aaKnown RBP9.15□□□□□ -0.94
VTN-202ENST00000539746 K7EQM0 130 aa9.15□□□□□ -0.94
VTN-202ENST00000539746 LGALS9O00182 355 aa9.15□□□□□ -0.94
VTN-202ENST00000539746 ATF4P18848 351 aaPredicted RBP9.15□□□□□ -0.94
VTN-202ENST00000539746 UBE2L3P68036 154 aaKnown RBP9.15□□□□□ -0.94
VTN-202ENST00000539746 PSG9Q00887 426 aa9.15□□□□□ -0.94
VTN-202ENST00000539746 MLANAQ16655 118 aa9.15□□□□□ -0.94
VTN-202ENST00000539746 LCN15Q6UWW0 184 aa9.15□□□□□ -0.94
VTN-202ENST00000539746 ZNF329Q86UD4 541 aa9.15□□□□□ -0.94
VTN-202ENST00000539746 C1QL4Q86Z23 238 aa9.15□□□□□ -0.94
VTN-202ENST00000539746 CCDC140Q96MF4 163 aa9.15□□□□□ -0.94
VTN-202ENST00000539746 PAXXQ9BUH6 204 aa9.15□□□□□ -0.94
VTN-202ENST00000539746 OR51M1Q9H341 326 aa9.15□□□□□ -0.94
VTN-202ENST00000539746 ESM1Q9NQ30 184 aa9.15□□□□□ -0.94
VTN-202ENST00000539746 OTOGQ6ZRI0 2925 aa9.15□□□□□ -0.94
VTN-202ENST00000539746 FLNBO75369 2602 aaKnown RBP9.15□□□□□ -0.95
VTN-202ENST00000539746 SERTM2A0A1B0GWG4 89 aa9.14□□□□□ -0.95
VTN-202ENST00000539746 A0A1W2PRE2 83 aa9.14□□□□□ -0.95
VTN-202ENST00000539746 LINC01619G3V211 115 aa9.14□□□□□ -0.95
VTN-202ENST00000539746 TMEM250H0YL14 139 aa9.14□□□□□ -0.95
VTN-202ENST00000539746 ZNF253O75346 499 aa9.14□□□□□ -0.95
VTN-202ENST00000539746 IGHV3-48P01763 117 aa9.14□□□□□ -0.95
VTN-202ENST00000539746 S100A9P06702 114 aaKnown RBP9.14□□□□□ -0.95
VTN-202ENST00000539746 BCL2P10415 239 aa9.14□□□□□ -0.95
VTN-202ENST00000539746 FAM74A3Q4VXF1 159 aa9.14□□□□□ -0.95
VTN-202ENST00000539746 REC114Q7Z4M0 266 aa9.14□□□□□ -0.95
VTN-202ENST00000539746 OR8I2Q8N0Y5 310 aa9.14□□□□□ -0.95
VTN-202ENST00000539746 LINC01006Q8NI28 216 aa9.14□□□□□ -0.95
VTN-202ENST00000539746 SLC25A39Q9BZJ4 359 aaPredicted RBP9.14□□□□□ -0.95
VTN-202ENST00000539746 AAMDCQ9H7C9 122 aa9.14□□□□□ -0.95
VTN-202ENST00000539746 CSPG4Q6UVK1 2322 aa9.14□□□□□ -0.95
VTN-202ENST00000539746 HIST1H1EP10412 219 aaKnown RBP9.13□□□□□ -0.95
VTN-202ENST00000539746 GCHFRP30047 84 aa9.13□□□□□ -0.95
VTN-202ENST00000539746 CSN1S1P47710 185 aa9.13□□□□□ -0.95
VTN-202ENST00000539746 MEF2BQ02080 365 aaPredicted RBP9.13□□□□□ -0.95
VTN-202ENST00000539746 TOMM20LQ6UXN7 152 aa9.13□□□□□ -0.95
VTN-202ENST00000539746 NDUFA11Q86Y39 141 aa9.13□□□□□ -0.95
VTN-202ENST00000539746 RXFP4Q8TDU9 374 aa9.13□□□□□ -0.95
VTN-202ENST00000539746 TREM1Q9NP99 234 aa9.13□□□□□ -0.95
VTN-202ENST00000539746 GNG13Q9P2W3 67 aa9.13□□□□□ -0.95
VTN-202ENST00000539746 PRELID1Q9Y255 219 aa9.13□□□□□ -0.95
VTN-202ENST00000539746 TET2Q6N021 2002 aaPredicted RBP9.13□□□□□ -0.95
VTN-202ENST00000539746 NBPF19A0A087WUL8 3843 aa9.12□□□□□ -0.95
VTN-202ENST00000539746 ZNF320A2RRD8 509 aa9.12□□□□□ -0.95
VTN-202ENST00000539746 ZNF98A6NK75 572 aa9.12□□□□□ -0.95
VTN-202ENST00000539746 H3BRN7 92 aa9.12□□□□□ -0.95
VTN-202ENST00000539746 RPLP1P05386 114 aaKnown RBP9.12□□□□□ -0.95
VTN-202ENST00000539746 ARL14EPLP0DKL9 152 aa9.12□□□□□ -0.95
VTN-202ENST00000539746 CRYBB3P26998 211 aa9.12□□□□□ -0.95
VTN-202ENST00000539746 PAFAH1B2P68402 229 aa9.12□□□□□ -0.95
VTN-202ENST00000539746 ZNF506Q5JVG8 444 aa9.12□□□□□ -0.95
VTN-202ENST00000539746 C19orf35Q6ZS72 473 aa9.12□□□□□ -0.95
VTN-202ENST00000539746 KLHL30-AS1Q8NEE0 82 aa9.12□□□□□ -0.95
VTN-202ENST00000539746 CMTM2Q8TAZ6 248 aa9.12□□□□□ -0.95
VTN-202ENST00000539746 TMEM37Q8WXS4 190 aa9.12□□□□□ -0.95
VTN-202ENST00000539746 SLC50A1Q9BRV3 221 aa9.12□□□□□ -0.95
VTN-202ENST00000539746 C20orf24Q9BUV8 137 aa9.12□□□□□ -0.95
VTN-202ENST00000539746 SLC35B3Q9H1N7 401 aa9.12□□□□□ -0.95
VTN-202ENST00000539746 GSX1Q9H4S2 264 aaPredicted RBP9.12□□□□□ -0.95
VTN-202ENST00000539746 SEPSECSQ9HD40 501 aaKnown RBP9.12□□□□□ -0.95
VTN-202ENST00000539746 DOK5Q9P104 306 aa9.12□□□□□ -0.95
VTN-202ENST00000539746 A8MWP6 167 aa9.11□□□□□ -0.95
VTN-202ENST00000539746 F8W735 103 aaPredicted RBP9.11□□□□□ -0.95
VTN-202ENST00000539746 IGHV3-11P01762 117 aa9.11□□□□□ -0.95
VTN-202ENST00000539746 ADMP35318 185 aa9.11□□□□□ -0.95
VTN-202ENST00000539746 TMEM95Q3KNT9 176 aa9.11□□□□□ -0.95
VTN-202ENST00000539746 OR1N2Q8NGR9 330 aa9.11□□□□□ -0.95
VTN-202ENST00000539746 HIST1H2BAQ96A08 127 aa9.11□□□□□ -0.95
VTN-202ENST00000539746 CHRDL1Q9BU40 450 aa9.11□□□□□ -0.95
VTN-202ENST00000539746 KLK15Q9H2R5 256 aa9.11□□□□□ -0.95
VTN-202ENST00000539746 BIN3Q9NQY0 253 aa9.11□□□□□ -0.95
VTN-202ENST00000539746 MRPL36Q9P0J6 103 aaKnown RBP9.11□□□□□ -0.95
VTN-202ENST00000539746 VPS13CQ709C8 3753 aa9.11□□□□□ -0.95
VTN-202ENST00000539746 C11orf94C9JXX5 98 aa9.1□□□□□ -0.95
VTN-202ENST00000539746 IGHV3-23P01764 117 aa9.1□□□□□ -0.95
VTN-202ENST00000539746 NBEAP1P0C6P0 100 aa9.1□□□□□ -0.95
VTN-202ENST00000539746 GATA2P23769 480 aaPredicted RBP9.1□□□□□ -0.95
VTN-202ENST00000539746 MYCNOSP40205 109 aa9.1□□□□□ -0.95
VTN-202ENST00000539746 ID1P41134 155 aa9.1□□□□□ -0.95
VTN-202ENST00000539746 CMC4P56277 68 aaPredicted RBP9.1□□□□□ -0.95
VTN-202ENST00000539746 CST9LP1Q5W188 147 aa9.1□□□□□ -0.95
VTN-202ENST00000539746 Q6ZS46 218 aa9.1□□□□□ -0.95
VTN-202ENST00000539746 Q71RC1 249 aaPredicted RBP9.1□□□□□ -0.95
VTN-202ENST00000539746 MIR17HGQ75NE6 70 aa9.1□□□□□ -0.95
VTN-202ENST00000539746 TMEM158Q8WZ71 300 aa9.1□□□□□ -0.95
VTN-202ENST00000539746 GPR61Q9BZJ8 451 aa9.1□□□□□ -0.95
VTN-202ENST00000539746 VSIRQ9H7M9 311 aa9.1□□□□□ -0.95
VTN-202ENST00000539746 ZANQ9Y493 2812 aa9.1□□□□□ -0.95
VTN-202ENST00000539746 SETXQ7Z333 2677 aaKnown RBP9.09□□□□□ -0.95
VTN-202ENST00000539746 AKAP9Q99996 3911 aa9.09□□□□□ -0.95
VTN-202ENST00000539746 A0A087X0K7 114 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms