RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 P01737 135 aa16.25■□□□□ 0.19
TMEM260-203ENST00000539559 VAMP3Q15836 100 aa16.25■□□□□ 0.19
TMEM260-203ENST00000539559 SYS1-DBNDD2H3BUS1 97 aa16.25■□□□□ 0.19
TMEM260-203ENST00000539559 LYPD2Q6UXB3 125 aa16.25■□□□□ 0.19
TMEM260-203ENST00000539559 MLST8Q9BVC4 326 aa16.25■□□□□ 0.19
TMEM260-203ENST00000539559 RNF24Q9Y225 148 aa16.25■□□□□ 0.19
TMEM260-203ENST00000539559 LEPROTL1O95214 131 aa16.24■□□□□ 0.19
TMEM260-203ENST00000539559 NUDT3O95989 172 aa16.24■□□□□ 0.19
TMEM260-203ENST00000539559 TNFSF4P23510 183 aa16.24■□□□□ 0.19
TMEM260-203ENST00000539559 CNTFRP26992 372 aa16.24■□□□□ 0.19
TMEM260-203ENST00000539559 RNF151Q2KHN1 245 aa16.24■□□□□ 0.19
TMEM260-203ENST00000539559 GAL3ST2Q9H3Q3 398 aa16.24■□□□□ 0.19
TMEM260-203ENST00000539559 TPRP12270 2363 aaKnown RBP16.24■□□□□ 0.19
TMEM260-203ENST00000539559 SCNM1Q9BWG6 230 aa16.24■□□□□ 0.19
TMEM260-203ENST00000539559 Q9H3A6 140 aa16.24■□□□□ 0.19
TMEM260-203ENST00000539559 FOXE3Q13461 319 aa16.23■□□□□ 0.19
TMEM260-203ENST00000539559 THAP8Q8NA92 274 aa16.23■□□□□ 0.19
TMEM260-203ENST00000539559 OR4C5Q8NGB2 326 aa16.23■□□□□ 0.19
TMEM260-203ENST00000539559 PERPQ96FX8 193 aa16.23■□□□□ 0.19
TMEM260-203ENST00000539559 POLEQ07864 2286 aa16.23■□□□□ 0.19
TMEM260-203ENST00000539559 SUB1P53999 127 aaKnown RBP eCLIP16.23■□□□□ 0.19
TMEM260-203ENST00000539559 ATP5L2Q7Z4Y8 100 aa16.23■□□□□ 0.19
TMEM260-203ENST00000539559 CHRDL1Q9BU40 450 aa16.23■□□□□ 0.19
TMEM260-203ENST00000539559 ATMQ13315 3056 aa16.23■□□□□ 0.19
TMEM260-203ENST00000539559 C1orf185Q5T7R7 199 aa16.22■□□□□ 0.19
TMEM260-203ENST00000539559 EXOC3-AS1Q8N2X6 119 aa16.22■□□□□ 0.19
TMEM260-203ENST00000539559 ABHD17AQ96GS6 310 aa16.22■□□□□ 0.19
TMEM260-203ENST00000539559 ZC2HC1AQ96GY0 325 aa16.22■□□□□ 0.19
TMEM260-203ENST00000539559 CBY3A6NI87 242 aa16.22■□□□□ 0.19
TMEM260-203ENST00000539559 A8MWL6 223 aa16.22■□□□□ 0.19
TMEM260-203ENST00000539559 SNAI2O43623 268 aa16.22■□□□□ 0.19
TMEM260-203ENST00000539559 CD40P25942 277 aa16.22■□□□□ 0.19
TMEM260-203ENST00000539559 MRGPRG-AS1Q2M3A8 158 aa16.22■□□□□ 0.19
TMEM260-203ENST00000539559 CCL17Q92583 94 aa16.22■□□□□ 0.19
TMEM260-203ENST00000539559 DAZAP1Q96EP5 407 aaKnown RBP16.22■□□□□ 0.19
TMEM260-203ENST00000539559 PRSS22Q9GZN4 317 aa16.22■□□□□ 0.19
TMEM260-203ENST00000539559 TCRAP04437 139 aa16.22■□□□□ 0.19
TMEM260-203ENST00000539559 TEX36Q5VZQ5 186 aa16.22■□□□□ 0.19
TMEM260-203ENST00000539559 KLF12Q9Y4X4 402 aa16.22■□□□□ 0.19
TMEM260-203ENST00000539559 SPTBN2O15020 2390 aa16.21■□□□□ 0.19
TMEM260-203ENST00000539559 MUC21A0A0G2JKD1 596 aa16.21■□□□□ 0.19
TMEM260-203ENST00000539559 MUC21A0A140T8X8 626 aa16.21■□□□□ 0.19
TMEM260-203ENST00000539559 C19orf71A6NCJ1 209 aa16.21■□□□□ 0.19
TMEM260-203ENST00000539559 CHEK1O14757 476 aa16.21■□□□□ 0.19
TMEM260-203ENST00000539559 MUC21Q5SSG8 566 aa16.21■□□□□ 0.19
TMEM260-203ENST00000539559 CUL9Q8IWT3 2517 aa16.21■□□□□ 0.19
TMEM260-203ENST00000539559 OR2T8A6NH00 312 aa16.21■□□□□ 0.18
TMEM260-203ENST00000539559 GP9P14770 177 aa16.21■□□□□ 0.18
TMEM260-203ENST00000539559 PRNTQ86SH4 94 aa16.21■□□□□ 0.18
TMEM260-203ENST00000539559 IGHV2-70DA0A0C4DH43 119 aa16.2■□□□□ 0.18
TMEM260-203ENST00000539559 LTAP01374 205 aa16.2■□□□□ 0.18
TMEM260-203ENST00000539559 C22orf15Q8WYQ4 148 aa16.2■□□□□ 0.18
TMEM260-203ENST00000539559 TMUB1Q9BVT8 246 aa16.2■□□□□ 0.18
TMEM260-203ENST00000539559 VSTM2AQ8TAG5 236 aa16.2■□□□□ 0.18
TMEM260-203ENST00000539559 A0A087X0K7 114 aa16.19■□□□□ 0.18
TMEM260-203ENST00000539559 COL8A1P27658 744 aa16.19■□□□□ 0.18
TMEM260-203ENST00000539559 GOLT1AQ6ZVE7 132 aa16.19■□□□□ 0.18
TMEM260-203ENST00000539559 C5orf17Q8NAS9 161 aa16.19■□□□□ 0.18
TMEM260-203ENST00000539559 LOC102724200A0A096LPH7 203 aaPredicted RBP16.19■□□□□ 0.18
TMEM260-203ENST00000539559 TAX1BP3O14907 124 aa16.19■□□□□ 0.18
TMEM260-203ENST00000539559 TCTAP57738 103 aa16.19■□□□□ 0.18
TMEM260-203ENST00000539559 LYZP61626 148 aa16.19■□□□□ 0.18
TMEM260-203ENST00000539559 RBPMS2Q6ZRY4 209 aaKnown RBP16.19■□□□□ 0.18
TMEM260-203ENST00000539559 FAM57AQ8TBR7 257 aa16.19■□□□□ 0.18
TMEM260-203ENST00000539559 WFDC8Q8IUA0 241 aa16.18■□□□□ 0.18
TMEM260-203ENST00000539559 SELENOKQ9Y6D0 94 aa16.18■□□□□ 0.18
TMEM260-203ENST00000539559 APC2O95996 2303 aa16.18■□□□□ 0.18
TMEM260-203ENST00000539559 INS-IGF2F8WCM5 200 aa16.18■□□□□ 0.18
TMEM260-203ENST00000539559 CRXO43186 299 aaPredicted RBP16.18■□□□□ 0.18
TMEM260-203ENST00000539559 BVES-AS1Q5T3Y7 98 aa16.18■□□□□ 0.18
TMEM260-203ENST00000539559 VMA21Q3ZAQ7 101 aa16.17■□□□□ 0.18
TMEM260-203ENST00000539559 SLC25A34Q6PIV7 304 aa16.17■□□□□ 0.18
TMEM260-203ENST00000539559 FMC1Q96HJ9 113 aa16.17■□□□□ 0.18
TMEM260-203ENST00000539559 TPPP3Q9BW30 176 aa16.17■□□□□ 0.18
TMEM260-203ENST00000539559 ST20Q9HBF5 79 aa16.17■□□□□ 0.18
TMEM260-203ENST00000539559 CTSZQ9UBR2 303 aa16.17■□□□□ 0.18
TMEM260-203ENST00000539559 TEX45Q8NA69 505 aa16.17■□□□□ 0.18
TMEM260-203ENST00000539559 C17orf77Q96MU5 243 aa16.17■□□□□ 0.18
TMEM260-203ENST00000539559 MALRD1Q5VYJ5 2156 aa16.17■□□□□ 0.18
TMEM260-203ENST00000539559 NHLH1Q02575 133 aa16.16■□□□□ 0.18
TMEM260-203ENST00000539559 STXBP6Q8NFX7 210 aa16.16■□□□□ 0.18
TMEM260-203ENST00000539559 CHCHD1Q96BP2 118 aaKnown RBP16.16■□□□□ 0.18
TMEM260-203ENST00000539559 Q86TA4 180 aa16.16■□□□□ 0.18
TMEM260-203ENST00000539559 ARMS2P0C7Q2 107 aa16.15■□□□□ 0.18
TMEM260-203ENST00000539559 PSG1P11464 419 aa16.15■□□□□ 0.18
TMEM260-203ENST00000539559 HTR1DP28221 377 aa16.15■□□□□ 0.18
TMEM260-203ENST00000539559 LRRC10Q5BKY1 277 aa16.15■□□□□ 0.18
TMEM260-203ENST00000539559 OR4A5Q8NH83 315 aa16.15■□□□□ 0.18
TMEM260-203ENST00000539559 TMEM191AQ9H0A3 160 aa16.15■□□□□ 0.18
TMEM260-203ENST00000539559 ANKRD11Q6UB99 2663 aaPredicted RBP16.15■□□□□ 0.18
TMEM260-203ENST00000539559 ZNF785A8K8V0 405 aa16.15■□□□□ 0.18
TMEM260-203ENST00000539559 C17orf100A8MU93 164 aa16.15■□□□□ 0.18
TMEM260-203ENST00000539559 K7ENP7 123 aa16.15■□□□□ 0.18
TMEM260-203ENST00000539559 MEF2CQ06413 473 aaPredicted RBP16.15■□□□□ 0.18
TMEM260-203ENST00000539559 ADIPOQQ15848 244 aa16.15■□□□□ 0.18
TMEM260-203ENST00000539559 TMEM30BQ3MIR4 351 aa16.15■□□□□ 0.18
TMEM260-203ENST00000539559 TMEM186Q96B77 213 aa16.15■□□□□ 0.18
TMEM260-203ENST00000539559 PPIAL4EA0A075B759 164 aa16.14■□□□□ 0.17
TMEM260-203ENST00000539559 PPIAL4DF5H284 164 aa16.14■□□□□ 0.17
TMEM260-203ENST00000539559 K7EP13 123 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms