RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 ORM2P19652 201 aa11.46□□□□□ -0.57
CIT-210ENST00000539413 SNRPD3P62318 126 aaKnown RBP11.46□□□□□ -0.57
CIT-210ENST00000539413 DLK1P80370 383 aa11.46□□□□□ -0.57
CIT-210ENST00000539413 C1orf194Q5T5A4 169 aa11.46□□□□□ -0.57
CIT-210ENST00000539413 CYP2G1PQ6ZSU1 146 aa11.46□□□□□ -0.57
CIT-210ENST00000539413 OR10P1Q8NGE3 313 aa11.46□□□□□ -0.57
CIT-210ENST00000539413 ENKURQ8TC29 256 aa11.46□□□□□ -0.57
CIT-210ENST00000539413 GATAD1Q8WUU5 269 aa11.46□□□□□ -0.57
CIT-210ENST00000539413 FBXL17Q9UF56 701 aa11.46□□□□□ -0.57
CIT-210ENST00000539413 LSM5Q9Y4Y9 91 aaKnown RBP11.46□□□□□ -0.57
CIT-210ENST00000539413 CSMD3Q7Z407 3707 aa11.46□□□□□ -0.57
CIT-210ENST00000539413 K7EPK0 472 aa11.45□□□□□ -0.58
CIT-210ENST00000539413 L7N2F9 121 aa11.45□□□□□ -0.58
CIT-210ENST00000539413 GIG44P09565 113 aaPredicted RBP11.45□□□□□ -0.58
CIT-210ENST00000539413 VAMP2P63027 116 aa11.45□□□□□ -0.58
CIT-210ENST00000539413 ARL16Q0P5N6 197 aa11.45□□□□□ -0.58
CIT-210ENST00000539413 OR8I2Q8N0Y5 310 aa11.45□□□□□ -0.58
CIT-210ENST00000539413 C2orf50Q96LR7 162 aa11.45□□□□□ -0.58
CIT-210ENST00000539413 RARRES2Q99969 163 aa11.45□□□□□ -0.58
CIT-210ENST00000539413 SEPSECSQ9HD40 501 aaKnown RBP11.45□□□□□ -0.58
CIT-210ENST00000539413 ZNF98A6NK75 572 aa11.44□□□□□ -0.58
CIT-210ENST00000539413 IL5P05113 134 aa11.44□□□□□ -0.58
CIT-210ENST00000539413 SPP1P10451 314 aa11.44□□□□□ -0.58
CIT-210ENST00000539413 C4BPBP20851 252 aa11.44□□□□□ -0.58
CIT-210ENST00000539413 MORN3Q6PF18 240 aaPredicted RBP11.44□□□□□ -0.58
CIT-210ENST00000539413 OR1B1Q8NGR6 318 aa11.44□□□□□ -0.58
CIT-210ENST00000539413 OR11H2Q8NH07 326 aa11.44□□□□□ -0.58
CIT-210ENST00000539413 SLC25A32Q9H2D1 315 aa11.44□□□□□ -0.58
CIT-210ENST00000539413 C11orf1Q9H5F2 150 aa11.44□□□□□ -0.58
CIT-210ENST00000539413 SLC25A22Q9H936 323 aa11.44□□□□□ -0.58
CIT-210ENST00000539413 NPVFQ9HCQ7 196 aa11.44□□□□□ -0.58
CIT-210ENST00000539413 BATF3Q9NR55 127 aa11.44□□□□□ -0.58
CIT-210ENST00000539413 DOK5Q9P104 306 aa11.44□□□□□ -0.58
CIT-210ENST00000539413 MGAT4CQ9UBM8 478 aa11.44□□□□□ -0.58
CIT-210ENST00000539413 SLC45A2Q9UMX9 530 aa11.44□□□□□ -0.58
CIT-210ENST00000539413 DYNC2H1Q8NCM8 4307 aaKnown RBP11.44□□□□□ -0.58
CIT-210ENST00000539413 FNDC10F2Z333 226 aa11.43□□□□□ -0.58
CIT-210ENST00000539413 SOCS3O14543 225 aa11.43□□□□□ -0.58
CIT-210ENST00000539413 DEFB1P60022 68 aa11.43□□□□□ -0.58
CIT-210ENST00000539413 NRARPQ7Z6K4 114 aa11.43□□□□□ -0.58
CIT-210ENST00000539413 TMEM147Q9BVK8 224 aa11.43□□□□□ -0.58
CIT-210ENST00000539413 LCE6AA0A183 80 aa11.42□□□□□ -0.58
CIT-210ENST00000539413 LINC00869P0C866 280 aa11.42□□□□□ -0.58
CIT-210ENST00000539413 BCAP31P51572 246 aa11.42□□□□□ -0.58
CIT-210ENST00000539413 SLC38A11Q08AI6 406 aa11.42□□□□□ -0.58
CIT-210ENST00000539413 IL15RAQ13261 267 aa11.42□□□□□ -0.58
CIT-210ENST00000539413 PMS2P11Q13670 270 aa11.42□□□□□ -0.58
CIT-210ENST00000539413 TEPPQ6URK8 271 aa11.42□□□□□ -0.58
CIT-210ENST00000539413 LINC00052Q96N35 136 aa11.42□□□□□ -0.58
CIT-210ENST00000539413 SCRT1Q9BWW7 348 aa11.42□□□□□ -0.58
CIT-210ENST00000539413 CXorf65A6NEN9 183 aa11.41□□□□□ -0.58
CIT-210ENST00000539413 FAM24AA6NFZ4 105 aa11.41□□□□□ -0.58
CIT-210ENST00000539413 H3BMM0 161 aa11.41□□□□□ -0.58
CIT-210ENST00000539413 H3BRN7 92 aa11.41□□□□□ -0.58
CIT-210ENST00000539413 DEDDO75618 318 aa11.41□□□□□ -0.58
CIT-210ENST00000539413 ID1P41134 155 aa11.41□□□□□ -0.58
CIT-210ENST00000539413 GALR1P47211 349 aa11.41□□□□□ -0.58
CIT-210ENST00000539413 PSMB3P49720 205 aa11.41□□□□□ -0.58
CIT-210ENST00000539413 CAV2P51636 162 aa11.41□□□□□ -0.58
CIT-210ENST00000539413 PLP1P60201 277 aa11.41□□□□□ -0.58
CIT-210ENST00000539413 S100A10P60903 97 aa11.41□□□□□ -0.58
CIT-210ENST00000539413 SELENOTP62341 195 aa11.41□□□□□ -0.58
CIT-210ENST00000539413 RAB32Q13637 225 aa11.41□□□□□ -0.58
CIT-210ENST00000539413 GDF5OSQ5U4N7 250 aa11.41□□□□□ -0.58
CIT-210ENST00000539413 TMEM217Q8N7C4 229 aa11.41□□□□□ -0.58
CIT-210ENST00000539413 C17orf77Q96MU5 243 aa11.41□□□□□ -0.58
CIT-210ENST00000539413 GGACTQ9BVM4 153 aa11.41□□□□□ -0.58
CIT-210ENST00000539413 SLC25A39Q9BZJ4 359 aaPredicted RBP11.41□□□□□ -0.58
CIT-210ENST00000539413 GPN1Q9HCN4 374 aaPredicted RBP11.41□□□□□ -0.58
CIT-210ENST00000539413 CLEC5AQ9NY25 188 aa11.41□□□□□ -0.58
CIT-210ENST00000539413 DEFB4AO15263 64 aa11.4□□□□□ -0.58
CIT-210ENST00000539413 HYPMO75409 117 aa11.4□□□□□ -0.58
CIT-210ENST00000539413 CST7O76096 145 aa11.4□□□□□ -0.58
CIT-210ENST00000539413 OR5G3P0C626 314 aa11.4□□□□□ -0.58
CIT-210ENST00000539413 HLA-DRB4P13762 266 aa11.4□□□□□ -0.58
CIT-210ENST00000539413 ATF4P18848 351 aaPredicted RBP11.4□□□□□ -0.58
CIT-210ENST00000539413 RAP2BP61225 183 aa11.4□□□□□ -0.58
CIT-210ENST00000539413 TMEM41BQ5BJD5 291 aa11.4□□□□□ -0.58
CIT-210ENST00000539413 UHRF2Q96PU4 802 aa11.4□□□□□ -0.58
CIT-210ENST00000539413 SHANK2-AS3Q9BTD1 123 aa11.4□□□□□ -0.58
CIT-210ENST00000539413 RSG1Q9BU20 258 aa11.4□□□□□ -0.58
CIT-210ENST00000539413 HIGD1AQ9Y241 93 aa11.4□□□□□ -0.58
CIT-210ENST00000539413 HLA-DRB4X5D2U9 266 aa11.4□□□□□ -0.58
CIT-210ENST00000539413 RYR2Q92736 4967 aa11.39□□□□□ -0.59
CIT-210ENST00000539413 INMT-MINDY4F8WBC2 141 aa11.39□□□□□ -0.59
CIT-210ENST00000539413 ISLRO14498 428 aa11.39□□□□□ -0.59
CIT-210ENST00000539413 AGPAT2O15120 278 aa11.39□□□□□ -0.59
CIT-210ENST00000539413 SIX6O95475 246 aa11.39□□□□□ -0.59
CIT-210ENST00000539413 PVALBP20472 110 aaPredicted RBP11.39□□□□□ -0.59
CIT-210ENST00000539413 S100A7P31151 101 aa11.39□□□□□ -0.59
CIT-210ENST00000539413 MEOX2P50222 304 aa11.39□□□□□ -0.59
CIT-210ENST00000539413 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.39□□□□□ -0.59
CIT-210ENST00000539413 PATE2Q6UY27 113 aa11.39□□□□□ -0.59
CIT-210ENST00000539413 CSNK1G2-AS1Q8NCQ2 148 aa11.39□□□□□ -0.59
CIT-210ENST00000539413 C16orf92Q96LL3 132 aa11.39□□□□□ -0.59
CIT-210ENST00000539413 MGST2Q99735 147 aa11.39□□□□□ -0.59
CIT-210ENST00000539413 ARL6Q9H0F7 186 aa11.39□□□□□ -0.59
CIT-210ENST00000539413 C11orf68Q9H3H3 251 aaKnown RBP11.39□□□□□ -0.59
CIT-210ENST00000539413 SAV1Q9H4B6 383 aaPredicted RBP11.39□□□□□ -0.59
CIT-210ENST00000539413 SACSQ9NZJ4 4579 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms