RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 CA2P00918 260 aa7.05□□□□□ -1.28
GGA3-202ENST00000538886 BCL2P10415 239 aa7.05□□□□□ -1.28
GGA3-202ENST00000538886 MGST1P10620 155 aaKnown RBP7.05□□□□□ -1.28
GGA3-202ENST00000538886 RPL27AP46776 148 aaKnown RBP7.05□□□□□ -1.28
GGA3-202ENST00000538886 RPL30P62888 115 aaKnown RBP7.05□□□□□ -1.28
GGA3-202ENST00000538886 Q56UQ5 140 aa7.05□□□□□ -1.28
GGA3-202ENST00000538886 ZNF506Q5JVG8 444 aa7.05□□□□□ -1.28
GGA3-202ENST00000538886 SDF2L1Q9HCN8 221 aa7.05□□□□□ -1.28
GGA3-202ENST00000538886 TBL2Q9Y4P3 447 aaKnown RBP7.05□□□□□ -1.28
GGA3-202ENST00000538886 RNF114Q9Y508 228 aa7.05□□□□□ -1.28
GGA3-202ENST00000538886 NSD1Q96L73 2696 aaPredicted RBP7.04□□□□□ -1.28
GGA3-202ENST00000538886 DUXBA0A1W2PPF3 345 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 LINC00473A8K010 186 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 G3V318 75 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 NUPR1O60356 82 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 NUDT3O95989 172 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 CT45A6P0DMU7 189 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 CT45A5P0DMU8 189 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 CT45A7P0DMV0 189 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 MYOD1P15172 320 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 NKX2-1P43699 371 aaPredicted RBP7.04□□□□□ -1.28
GGA3-202ENST00000538886 RPL8P62917 257 aaKnown RBP7.04□□□□□ -1.28
GGA3-202ENST00000538886 PAFAH1B2P68402 229 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 SLAQ13239 276 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 Q6ZWC4 215 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 C8orf46Q8TAG6 207 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 TMEM230Q96A57 120 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 DUX3Q96PT4 197 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 DERL1Q9BUN8 251 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 IFI27L2Q9H2X8 130 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 TMEM140Q9NV12 185 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 VPREB3Q9UKI3 123 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 OTOGQ6ZRI0 2925 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 FCN1O00602 326 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 VENTXO95231 258 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 TRGV3P03979 118 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 LOXL3P58215 753 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 CKS1BP61024 79 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 RAB31Q13636 194 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 TMEM158Q8WZ71 300 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 ZNF48Q96MX3 618 aaPredicted RBP7.04□□□□□ -1.28
GGA3-202ENST00000538886 NAA60Q9H7X0 242 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 MOB4Q9Y3A3 225 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 TRAV26-1A0A087WT03 109 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 NPIPB11E5RHQ5 1161 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 HYPMO75409 117 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 FCN3O75636 299 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 RBP4P02753 201 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 OPRK1P41145 380 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 PSMB3P49720 205 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 RAB9AP51151 201 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 RELBQ01201 579 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 OR52M1Q8NGK5 317 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 SPIN2AQ99865 258 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 SPIN2BQ9BPZ2 258 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 NABP2Q9BQ15 211 aa7.04□□□□□ -1.28
GGA3-202ENST00000538886 IGHV3OR16-13A0A075B7E8 117 aa7.03□□□□□ -1.28
GGA3-202ENST00000538886 IGHV3-74A0A0B4J1X5 117 aa7.03□□□□□ -1.28
GGA3-202ENST00000538886 OR2J3O76001 311 aa7.03□□□□□ -1.28
GGA3-202ENST00000538886 SAA1P0DJI8 122 aaPredicted RBP7.03□□□□□ -1.28
GGA3-202ENST00000538886 CBLN1P23435 193 aa7.03□□□□□ -1.28
GGA3-202ENST00000538886 UCP1P25874 307 aa7.03□□□□□ -1.28
GGA3-202ENST00000538886 DUTP33316 252 aaKnown RBP7.03□□□□□ -1.28
GGA3-202ENST00000538886 DYNLT3P51808 116 aa7.03□□□□□ -1.28
GGA3-202ENST00000538886 PPP1R27Q86WC6 154 aa7.03□□□□□ -1.28
GGA3-202ENST00000538886 KRTAP1-3Q8IUG1 177 aa7.03□□□□□ -1.28
GGA3-202ENST00000538886 SGMS2Q8NHU3 365 aa7.03□□□□□ -1.28
GGA3-202ENST00000538886 P2RX4Q99571 388 aa7.03□□□□□ -1.28
GGA3-202ENST00000538886 NAA38Q9BRA0 125 aaKnown RBP7.03□□□□□ -1.28
GGA3-202ENST00000538886 PSMB11A5LHX3 300 aa7.03□□□□□ -1.28
GGA3-202ENST00000538886 RND2P52198 227 aa7.03□□□□□ -1.28
GGA3-202ENST00000538886 CXorf66Q5JRM2 361 aaPredicted RBP7.03□□□□□ -1.28
GGA3-202ENST00000538886 TMEM56Q96MV1 263 aa7.03□□□□□ -1.28
GGA3-202ENST00000538886 LOC102723971A0A1B0GUV8 181 aa7.03□□□□□ -1.28
GGA3-202ENST00000538886 K7EQM0 130 aa7.03□□□□□ -1.28
GGA3-202ENST00000538886 RBFOX2O43251 390 aaKnown RBP eCLIP7.03□□□□□ -1.28
GGA3-202ENST00000538886 TSPOP30536 169 aa7.03□□□□□ -1.28
GGA3-202ENST00000538886 CX3CL1P78423 397 aa7.03□□□□□ -1.28
GGA3-202ENST00000538886 SLC45A2Q9UMX9 530 aa7.03□□□□□ -1.28
GGA3-202ENST00000538886 OR51B2Q9Y5P1 312 aa7.03□□□□□ -1.28
GGA3-202ENST00000538886 TMEM56-RWDD3S4R434 201 aa7.03□□□□□ -1.28
GGA3-202ENST00000538886 ECI1P42126 302 aa7.02□□□□□ -1.29
GGA3-202ENST00000538886 SUPT4H1P63272 117 aaKnown RBP7.02□□□□□ -1.29
GGA3-202ENST00000538886 KIAA1644Q3SXP7 199 aa7.02□□□□□ -1.29
GGA3-202ENST00000538886 MPV17L2Q567V2 206 aa7.02□□□□□ -1.29
GGA3-202ENST00000538886 ACSM6Q6P461 480 aa7.02□□□□□ -1.29
GGA3-202ENST00000538886 MMD2Q8IY49 270 aa7.02□□□□□ -1.29
GGA3-202ENST00000538886 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.02□□□□□ -1.29
GGA3-202ENST00000538886 OR51G1Q8NGK1 321 aa7.02□□□□□ -1.29
GGA3-202ENST00000538886 LYPD6BQ8NI32 183 aa7.02□□□□□ -1.29
GGA3-202ENST00000538886 SFRP2Q96HF1 295 aa7.02□□□□□ -1.29
GGA3-202ENST00000538886 TCF19Q9Y242 345 aa7.02□□□□□ -1.29
GGA3-202ENST00000538886 NOTCH1P46531 2555 aa7.02□□□□□ -1.29
GGA3-202ENST00000538886 ZNF207O43670 478 aaKnown RBP7.02□□□□□ -1.29
GGA3-202ENST00000538886 NBEAP1P0C6P0 100 aa7.02□□□□□ -1.29
GGA3-202ENST00000538886 CRYBA4P53673 196 aa7.02□□□□□ -1.29
GGA3-202ENST00000538886 PAX2Q02962 417 aa7.02□□□□□ -1.29
GGA3-202ENST00000538886 LYPD6Q86Y78 171 aa7.02□□□□□ -1.29
GGA3-202ENST00000538886 LY6G5BQ8NDX9 201 aa7.02□□□□□ -1.29
GGA3-202ENST00000538886 ARPC1AQ92747 370 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms