RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 BRWD1-AS2P59051 145 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 GNG5P63218 68 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 PAX2Q02962 417 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 DEFB135Q30KP9 77 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 FAM74A4Q5TZK3 123 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 SHISA2Q6UWI4 295 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 ZNF600Q6ZNG1 722 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 BPIFA4PQ86YQ2 179 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 LINC01587Q99440 93 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 MAP1LC3BQ9GZQ8 125 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 ZNF257Q9Y2Q1 563 aa5.63□□□□□ -1.51
MSH6-209ENST00000538136 IGLC7A0M8Q6 106 aa5.62□□□□□ -1.51
MSH6-209ENST00000538136 CORTO00230 105 aa5.62□□□□□ -1.51
MSH6-209ENST00000538136 PAGE4O60829 102 aa5.62□□□□□ -1.51
MSH6-209ENST00000538136 CT45A10P0DMU9 189 aa5.62□□□□□ -1.51
MSH6-209ENST00000538136 BAP18Q8IXM2 172 aa5.62□□□□□ -1.51
MSH6-209ENST00000538136 TMEM61Q8N0U2 210 aa5.62□□□□□ -1.51
MSH6-209ENST00000538136 TRAV8-1A0A0A6YYK1 113 aa5.62□□□□□ -1.51
MSH6-209ENST00000538136 I3L521 148 aa5.62□□□□□ -1.51
MSH6-209ENST00000538136 APOC3P02656 99 aa5.62□□□□□ -1.51
MSH6-209ENST00000538136 APOHP02749 345 aaPredicted RBP5.62□□□□□ -1.51
MSH6-209ENST00000538136 ELANEP08246 267 aa5.62□□□□□ -1.51
MSH6-209ENST00000538136 HIST1H1BP16401 226 aaKnown RBP5.62□□□□□ -1.51
MSH6-209ENST00000538136 KRTAP1-1Q07627 177 aa5.62□□□□□ -1.51
MSH6-209ENST00000538136 CYP2G1PQ6ZSU1 146 aa5.62□□□□□ -1.51
MSH6-209ENST00000538136 DAZ1Q9NQZ3 744 aaKnown RBP5.62□□□□□ -1.51
MSH6-209ENST00000538136 M0R2Z0 102 aa5.62□□□□□ -1.51
MSH6-209ENST00000538136 RBFOX2O43251 390 aaKnown RBP eCLIP5.62□□□□□ -1.514e-10■□□□□ 8.3
MSH6-209ENST00000538136 IGLV2-14P01704 120 aa5.62□□□□□ -1.51
MSH6-209ENST00000538136 GPX1P07203 203 aa5.62□□□□□ -1.51
MSH6-209ENST00000538136 SPINK13Q1W4C9 94 aa5.62□□□□□ -1.51
MSH6-209ENST00000538136 Q6ZSR3 168 aa5.62□□□□□ -1.51
MSH6-209ENST00000538136 OR11H4Q8NGC9 324 aa5.62□□□□□ -1.51
MSH6-209ENST00000538136 TOLLIPQ9H0E2 274 aa5.62□□□□□ -1.51
MSH6-209ENST00000538136 MEGF9Q9H1U4 602 aa5.62□□□□□ -1.51
MSH6-209ENST00000538136 VWFP04275 2813 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 IGHV3-73A0A0B4J1V6 119 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 NAT1P18440 290 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 ADIRFQ15847 76 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 RRN3P1Q2M238 152 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 ZFAND6Q6FIF0 208 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 VSIRQ9H7M9 311 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 NDUFA4L2Q9NRX3 87 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 GAR1Q9NY12 217 aaKnown RBP5.61□□□□□ -1.51
MSH6-209ENST00000538136 A0A1B0GWJ7 208 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 CLN5O75503 358 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 JTBO76095 146 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 ID1P41134 155 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 NMSQ5H8A3 153 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 RAB24Q969Q5 203 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 ATP5SQ99766 215 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 A0A096LPF7 62 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 SERTM2A0A1B0GWG4 89 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 FAM90A9PA6NNJ1 464 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 C15orf62A8K5M9 175 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 F6UZH7 168 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 DEDDO75618 318 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 B3GALNT1O75752 331 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 CTRB1P17538 263 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 CTRB2Q6GPI1 263 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 TCTEX1D1Q8N7M0 179 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 RAX2Q96IS3 184 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 C17orf77Q96MU5 243 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 SEPSECSQ9HD40 501 aaKnown RBP5.61□□□□□ -1.51
MSH6-209ENST00000538136 UFC1Q9Y3C8 167 aa5.61□□□□□ -1.51
MSH6-209ENST00000538136 IGKV2-40A0A087WW87 121 aaPredicted RBP5.6□□□□□ -1.51
MSH6-209ENST00000538136 IGKV3OR2-268A0A0C4DH90 116 aa5.6□□□□□ -1.51
MSH6-209ENST00000538136 GRIFINA4D1Z8 144 aa5.6□□□□□ -1.51
MSH6-209ENST00000538136 IGKV2D-40P01614 121 aaPredicted RBP5.6□□□□□ -1.51
MSH6-209ENST00000538136 ARL14EPLP0DKL9 152 aa5.6□□□□□ -1.51
MSH6-209ENST00000538136 RNASE4P34096 147 aaKnown RBP5.6□□□□□ -1.51
MSH6-209ENST00000538136 OR10J6PQ8NGY7 276 aa5.6□□□□□ -1.51
MSH6-209ENST00000538136 PRM2P04554 102 aa5.6□□□□□ -1.51
MSH6-209ENST00000538136 CBLN1P23435 193 aa5.6□□□□□ -1.51
MSH6-209ENST00000538136 TMEM78Q5T7P6 136 aa5.6□□□□□ -1.51
MSH6-209ENST00000538136 USMG5Q96IX5 58 aa5.6□□□□□ -1.51
MSH6-209ENST00000538136 RPRMQ9NS64 109 aa5.6□□□□□ -1.51
MSH6-209ENST00000538136 IZUMO1RA6ND01 250 aa5.6□□□□□ -1.51
MSH6-209ENST00000538136 OR4C46A6NHA9 309 aa5.6□□□□□ -1.51
MSH6-209ENST00000538136 K7EQM0 130 aa5.6□□□□□ -1.51
MSH6-209ENST00000538136 CA1P00915 261 aaPredicted RBP5.6□□□□□ -1.51
MSH6-209ENST00000538136 LGALS1P09382 135 aaKnown RBP5.6□□□□□ -1.51
MSH6-209ENST00000538136 PSMB3P49720 205 aa5.6□□□□□ -1.51
MSH6-209ENST00000538136 SIGLEC15Q6ZMC9 328 aa5.6□□□□□ -1.51
MSH6-209ENST00000538136 OR9G4Q8NGQ1 327 aa5.6□□□□□ -1.51
MSH6-209ENST00000538136 RNF141Q8WVD5 230 aa5.6□□□□□ -1.51
MSH6-209ENST00000538136 NDFIP1Q9BT67 221 aa5.6□□□□□ -1.51
MSH6-209ENST00000538136 PLA2G2EQ9NZK7 142 aa5.6□□□□□ -1.51
MSH6-209ENST00000538136 TRAV12-3A0A0B4J271 114 aa5.59□□□□□ -1.51
MSH6-209ENST00000538136 NBEAP1P0C6P0 100 aa5.59□□□□□ -1.51
MSH6-209ENST00000538136 RPL7P18124 248 aaKnown RBP5.59□□□□□ -1.51
MSH6-209ENST00000538136 RND3P61587 244 aa5.59□□□□□ -1.51
MSH6-209ENST00000538136 USF2Q15853 346 aaPredicted RBP5.59□□□□□ -1.51
MSH6-209ENST00000538136 LY6G6FQ5SQ64 297 aa5.59□□□□□ -1.51
MSH6-209ENST00000538136 HSD17B13Q7Z5P4 300 aaPredicted RBP5.59□□□□□ -1.51
MSH6-209ENST00000538136 FRZBQ92765 325 aa5.59□□□□□ -1.51
MSH6-209ENST00000538136 NEURL2Q9BR09 285 aa5.59□□□□□ -1.51
MSH6-209ENST00000538136 LYRM2Q9NU23 88 aaPredicted RBP5.59□□□□□ -1.51
MSH6-209ENST00000538136 HSPB7Q9UBY9 170 aa5.59□□□□□ -1.51
MSH6-209ENST00000538136 A0A096LNT2 108 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms