RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 OR2J3O76001 311 aa6.95□□□□□ -1.3
UBE3B-208ENST00000538070 ZNF705AQ6ZN79 300 aaPredicted RBP6.95□□□□□ -1.3
UBE3B-208ENST00000538070 PGLYRP4Q96LB8 373 aa6.95□□□□□ -1.3
UBE3B-208ENST00000538070 TMUB1Q9BVT8 246 aa6.95□□□□□ -1.3
UBE3B-208ENST00000538070 KAAG1Q9UBP8 84 aa6.95□□□□□ -1.3
UBE3B-208ENST00000538070 IGLV1-47P01700 117 aa6.94□□□□□ -1.3
UBE3B-208ENST00000538070 DDTP30046 118 aa6.94□□□□□ -1.3
UBE3B-208ENST00000538070 SELENOTP62341 195 aa6.94□□□□□ -1.3
UBE3B-208ENST00000538070 ZNF600Q6ZNG1 722 aa6.94□□□□□ -1.3
UBE3B-208ENST00000538070 ZNF329Q86UD4 541 aa6.94□□□□□ -1.3
UBE3B-208ENST00000538070 ZNF664Q8N3J9 261 aa6.94□□□□□ -1.3
UBE3B-208ENST00000538070 A0A1W2PRE2 83 aa6.94□□□□□ -1.3
UBE3B-208ENST00000538070 TNFRSF13BO14836 293 aaPredicted RBP6.94□□□□□ -1.3
UBE3B-208ENST00000538070 BCL6BQ8N143 479 aaPredicted RBP6.94□□□□□ -1.3
UBE3B-208ENST00000538070 SIGLECL1Q8N7X8 197 aa6.94□□□□□ -1.3
UBE3B-208ENST00000538070 TEX45Q8NA69 505 aa6.94□□□□□ -1.3
UBE3B-208ENST00000538070 NUDT10Q8NFP7 164 aa6.94□□□□□ -1.3
UBE3B-208ENST00000538070 NUDT11Q96G61 164 aa6.94□□□□□ -1.3
UBE3B-208ENST00000538070 Q9H3A6 140 aa6.94□□□□□ -1.3
UBE3B-208ENST00000538070 A6NNC1 897 aa6.94□□□□□ -1.3
UBE3B-208ENST00000538070 M0QZ24 198 aa6.94□□□□□ -1.3
UBE3B-208ENST00000538070 CD99P14209 185 aa6.94□□□□□ -1.3
UBE3B-208ENST00000538070 RPL19P84098 196 aaKnown RBP6.94□□□□□ -1.3
UBE3B-208ENST00000538070 JOSD1Q15040 202 aaPredicted RBP6.94□□□□□ -1.3
UBE3B-208ENST00000538070 CIARTQ8N365 385 aaPredicted RBP6.94□□□□□ -1.3
UBE3B-208ENST00000538070 GBGT1Q8N5D6 347 aa6.94□□□□□ -1.3
UBE3B-208ENST00000538070 LINC00311Q8N616 119 aa6.94□□□□□ -1.3
UBE3B-208ENST00000538070 FXYD5Q96DB9 178 aa6.94□□□□□ -1.3
UBE3B-208ENST00000538070 MRPL32Q9BYC8 188 aaKnown RBP6.94□□□□□ -1.3
UBE3B-208ENST00000538070 CBLN4Q9NTU7 201 aa6.94□□□□□ -1.3
UBE3B-208ENST00000538070 A0A1W2PPR1 153 aa6.93□□□□□ -1.3
UBE3B-208ENST00000538070 OR2T8A6NH00 312 aa6.93□□□□□ -1.3
UBE3B-208ENST00000538070 M0R3E3 92 aa6.93□□□□□ -1.3
UBE3B-208ENST00000538070 CSN3P07498 182 aa6.93□□□□□ -1.3
UBE3B-208ENST00000538070 G0S2P27469 103 aa6.93□□□□□ -1.3
UBE3B-208ENST00000538070 VMO1Q7Z5L0 202 aa6.93□□□□□ -1.3
UBE3B-208ENST00000538070 EPDR1Q9UM22 224 aa6.93□□□□□ -1.3
UBE3B-208ENST00000538070 F11RQ9Y624 299 aaKnown RBP6.93□□□□□ -1.3
UBE3B-208ENST00000538070 SONP18583 2426 aaKnown RBP6.93□□□□□ -1.3
UBE3B-208ENST00000538070 HIGD1CA8MV81 97 aa6.93□□□□□ -1.3
UBE3B-208ENST00000538070 ZNF207O43670 478 aaKnown RBP6.93□□□□□ -1.3
UBE3B-208ENST00000538070 APCSP02743 223 aa6.93□□□□□ -1.3
UBE3B-208ENST00000538070 AMY1AP04745 511 aa6.93□□□□□ -1.3
UBE3B-208ENST00000538070 TPPP2P59282 170 aa6.93□□□□□ -1.3
UBE3B-208ENST00000538070 TDRG1Q3Y452 100 aa6.93□□□□□ -1.3
UBE3B-208ENST00000538070 TPTE2P1Q5T6R2 138 aa6.93□□□□□ -1.3
UBE3B-208ENST00000538070 RNASEKQ6P5S7 137 aaKnown RBP6.93□□□□□ -1.3
UBE3B-208ENST00000538070 OR4A5Q8NH83 315 aa6.93□□□□□ -1.3
UBE3B-208ENST00000538070 ZNF462Q96JM2 2506 aa6.93□□□□□ -1.3
UBE3B-208ENST00000538070 A0A1B0GV90 55 aa6.92□□□□□ -1.3
UBE3B-208ENST00000538070 C9JCJ5 164 aa6.92□□□□□ -1.3
UBE3B-208ENST00000538070 NBR2O15453 112 aa6.92□□□□□ -1.3
UBE3B-208ENST00000538070 GNLYP22749 145 aa6.92□□□□□ -1.3
UBE3B-208ENST00000538070 PKIAP61925 76 aa6.92□□□□□ -1.3
UBE3B-208ENST00000538070 DYNAPQ8N1N2 210 aa6.92□□□□□ -1.3
UBE3B-208ENST00000538070 OR5R1Q8NH85 324 aa6.92□□□□□ -1.3
UBE3B-208ENST00000538070 MYO9AB2RTY4 2548 aa6.92□□□□□ -1.3
UBE3B-208ENST00000538070 ZFP36P26651 326 aaKnown RBP6.92□□□□□ -1.3
UBE3B-208ENST00000538070 PMCHL1Q16048 86 aa6.92□□□□□ -1.3
UBE3B-208ENST00000538070 C11orf52Q96A22 123 aa6.92□□□□□ -1.3
UBE3B-208ENST00000538070 RCHY1Q96PM5 261 aa6.92□□□□□ -1.3
UBE3B-208ENST00000538070 RNF2Q99496 336 aa6.92□□□□□ -1.3
UBE3B-208ENST00000538070 NEU1Q99519 415 aa6.92□□□□□ -1.3
UBE3B-208ENST00000538070 C19orf24Q9BVV8 132 aa6.92□□□□□ -1.3
UBE3B-208ENST00000538070 TEX22C9J3V5 150 aa6.92□□□□□ -1.3
UBE3B-208ENST00000538070 TYMSP04818 313 aa6.92□□□□□ -1.3
UBE3B-208ENST00000538070 COL8A1P27658 744 aa6.92□□□□□ -1.3
UBE3B-208ENST00000538070 CEACAM3P40198 252 aa6.92□□□□□ -1.3
UBE3B-208ENST00000538070 UCNP55089 124 aa6.92□□□□□ -1.3
UBE3B-208ENST00000538070 CX3CL1P78423 397 aa6.92□□□□□ -1.3
UBE3B-208ENST00000538070 MRGPRG-AS1Q2M3A8 158 aa6.92□□□□□ -1.3
UBE3B-208ENST00000538070 TMEM249Q2WGJ8 235 aa6.92□□□□□ -1.3
UBE3B-208ENST00000538070 NOL4LQ96MY1 436 aaPredicted RBP6.92□□□□□ -1.3
UBE3B-208ENST00000538070 NAGKQ9UJ70 344 aa6.92□□□□□ -1.3
UBE3B-208ENST00000538070 IGLV2-8P01709 118 aa6.91□□□□□ -1.3
UBE3B-208ENST00000538070 P01737 135 aa6.91□□□□□ -1.3
UBE3B-208ENST00000538070 TMEM219Q86XT9 240 aa6.91□□□□□ -1.3
UBE3B-208ENST00000538070 ATG101Q9BSB4 218 aa6.91□□□□□ -1.3
UBE3B-208ENST00000538070 SLC25A39Q9BZJ4 359 aaPredicted RBP6.91□□□□□ -1.3
UBE3B-208ENST00000538070 CDC42EP3Q9UKI2 254 aa6.91□□□□□ -1.3
UBE3B-208ENST00000538070 SLAQ13239 276 aa6.91□□□□□ -1.3
UBE3B-208ENST00000538070 FAM120AOSQ5T036 256 aa6.91□□□□□ -1.3
UBE3B-208ENST00000538070 C14orf144Q96I85 54 aa6.91□□□□□ -1.3
UBE3B-208ENST00000538070 FNDC10F2Z333 226 aa6.91□□□□□ -1.3
UBE3B-208ENST00000538070 GCGP01275 180 aa6.91□□□□□ -1.3
UBE3B-208ENST00000538070 ATP5IP56385 69 aaPredicted RBP6.91□□□□□ -1.3
UBE3B-208ENST00000538070 LINC00322Q6ZN03 302 aaPredicted RBP6.91□□□□□ -1.3
UBE3B-208ENST00000538070 NUP35Q8NFH5 326 aa6.91□□□□□ -1.3
UBE3B-208ENST00000538070 BPESC1Q9GZL8 116 aa6.91□□□□□ -1.3
UBE3B-208ENST00000538070 OSTCQ9NRP0 149 aa6.91□□□□□ -1.3
UBE3B-208ENST00000538070 SORL1Q92673 2214 aa6.91□□□□□ -1.3
UBE3B-208ENST00000538070 PSMB11A5LHX3 300 aa6.9□□□□□ -1.3
UBE3B-208ENST00000538070 RNF224P0DH78 156 aa6.9□□□□□ -1.3
UBE3B-208ENST00000538070 PCP4P48539 62 aa6.9□□□□□ -1.3
UBE3B-208ENST00000538070 Q6ZWC4 215 aa6.9□□□□□ -1.3
UBE3B-208ENST00000538070 OR4F17Q8NGA8 305 aa6.9□□□□□ -1.3
UBE3B-208ENST00000538070 TBL2Q9Y4P3 447 aaKnown RBP6.9□□□□□ -1.3
UBE3B-208ENST00000538070 IGKV3-7A0A075B6H7 116 aa6.9□□□□□ -1.3
UBE3B-208ENST00000538070 HSBP1O75506 76 aa6.9□□□□□ -1.3
UBE3B-208ENST00000538070 IGLC1P0CG04 106 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms