RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 CFDP00746 253 aaPredicted RBP12.74□□□□□ -0.37
GPN3-202ENST00000537466 NUP62P37198 522 aaPredicted RBP12.74□□□□□ -0.37
GPN3-202ENST00000537466 BCAP31P51572 246 aa12.74□□□□□ -0.37
GPN3-202ENST00000537466 PPP1R14BQ96C90 147 aa12.74□□□□□ -0.37
GPN3-202ENST00000537466 NPVFQ9HCQ7 196 aa12.74□□□□□ -0.37
GPN3-202ENST00000537466 NRN1Q9NPD7 142 aa12.74□□□□□ -0.37
GPN3-202ENST00000537466 MGAT4CQ9UBM8 478 aa12.74□□□□□ -0.37
GPN3-202ENST00000537466 ORM2P19652 201 aa12.73□□□□□ -0.37
GPN3-202ENST00000537466 CAV2P51636 162 aa12.73□□□□□ -0.37
GPN3-202ENST00000537466 Q6ZWC4 215 aa12.73□□□□□ -0.37
GPN3-202ENST00000537466 PFDN2Q9UHV9 154 aa12.73□□□□□ -0.37
GPN3-202ENST00000537466 UBE2CO00762 179 aa12.72□□□□□ -0.37
GPN3-202ENST00000537466 CST7O76096 145 aa12.72□□□□□ -0.37
GPN3-202ENST00000537466 SLC38A11Q08AI6 406 aa12.72□□□□□ -0.37
GPN3-202ENST00000537466 C1orf194Q5T5A4 169 aa12.72□□□□□ -0.37
GPN3-202ENST00000537466 OR1B1Q8NGR6 318 aa12.72□□□□□ -0.37
GPN3-202ENST00000537466 DOK5Q9P104 306 aa12.72□□□□□ -0.37
GPN3-202ENST00000537466 KNCNA6PVL3 124 aa12.72□□□□□ -0.37
GPN3-202ENST00000537466 C3orf84H3BNL1 204 aa12.72□□□□□ -0.37
GPN3-202ENST00000537466 DEDDO75618 318 aa12.72□□□□□ -0.37
GPN3-202ENST00000537466 PVALBP20472 110 aaPredicted RBP12.72□□□□□ -0.37
GPN3-202ENST00000537466 PSMG4Q5JS54 123 aa12.72□□□□□ -0.37
GPN3-202ENST00000537466 TEPPQ6URK8 271 aa12.72□□□□□ -0.37
GPN3-202ENST00000537466 GGACTQ9BVM4 153 aa12.72□□□□□ -0.37
GPN3-202ENST00000537466 CSTL1Q9H114 145 aa12.72□□□□□ -0.37
GPN3-202ENST00000537466 LYRM2Q9NU23 88 aaPredicted RBP12.72□□□□□ -0.37
GPN3-202ENST00000537466 FBXL17Q9UF56 701 aa12.72□□□□□ -0.37
GPN3-202ENST00000537466 SLC45A2Q9UMX9 530 aa12.72□□□□□ -0.37
GPN3-202ENST00000537466 CSMD3Q7Z407 3707 aa12.71□□□□□ -0.37
GPN3-202ENST00000537466 IGSF23A1L1A6 192 aa12.71□□□□□ -0.38
GPN3-202ENST00000537466 ZNF98A6NK75 572 aa12.71□□□□□ -0.38
GPN3-202ENST00000537466 SPRY2O43597 315 aa12.71□□□□□ -0.38
GPN3-202ENST00000537466 LINC00869P0C866 280 aa12.71□□□□□ -0.38
GPN3-202ENST00000537466 STHQ8IWL8 128 aa12.71□□□□□ -0.38
GPN3-202ENST00000537466 OR8I2Q8N0Y5 310 aa12.71□□□□□ -0.38
GPN3-202ENST00000537466 TMEM217Q8N7C4 229 aa12.71□□□□□ -0.38
GPN3-202ENST00000537466 RNF183Q96D59 192 aa12.71□□□□□ -0.38
GPN3-202ENST00000537466 TMEM147Q9BVK8 224 aa12.71□□□□□ -0.38
GPN3-202ENST00000537466 SLC25A32Q9H2D1 315 aa12.71□□□□□ -0.38
GPN3-202ENST00000537466 SLC25A22Q9H936 323 aa12.71□□□□□ -0.38
GPN3-202ENST00000537466 TP53TG1Q9Y2A0 90 aa12.71□□□□□ -0.38
GPN3-202ENST00000537466 H2BFSP57053 126 aa12.7□□□□□ -0.38
GPN3-202ENST00000537466 SELENOTP62341 195 aa12.7□□□□□ -0.38
GPN3-202ENST00000537466 TRPT1Q86TN4 253 aaKnown RBP12.7□□□□□ -0.38
GPN3-202ENST00000537466 TMEM252Q8N6L7 170 aa12.7□□□□□ -0.38
GPN3-202ENST00000537466 NMES1Q9C002 83 aa12.7□□□□□ -0.38
GPN3-202ENST00000537466 KMT2CQ8NEZ4 4911 aaKnown RBP12.69□□□□□ -0.38
GPN3-202ENST00000537466 SOCS3O14543 225 aa12.69□□□□□ -0.38
GPN3-202ENST00000537466 AGPAT2O15120 278 aa12.69□□□□□ -0.38
GPN3-202ENST00000537466 SULT1A1P50225 295 aa12.69□□□□□ -0.38
GPN3-202ENST00000537466 PLP1P60201 277 aa12.69□□□□□ -0.38
GPN3-202ENST00000537466 SNRPD3P62318 126 aaKnown RBP12.69□□□□□ -0.38
GPN3-202ENST00000537466 LRRC37A5PQ49AS3 106 aa12.69□□□□□ -0.38
GPN3-202ENST00000537466 ACTL10Q5JWF8 245 aa12.69□□□□□ -0.38
GPN3-202ENST00000537466 CASC10Q5T4H9 136 aa12.69□□□□□ -0.38
GPN3-202ENST00000537466 C17orf77Q96MU5 243 aa12.69□□□□□ -0.38
GPN3-202ENST00000537466 MGST2Q99735 147 aa12.69□□□□□ -0.38
GPN3-202ENST00000537466 SCRT1Q9BWW7 348 aa12.69□□□□□ -0.38
GPN3-202ENST00000537466 SEPSECSQ9HD40 501 aaKnown RBP12.69□□□□□ -0.38
GPN3-202ENST00000537466 H3BRN7 92 aa12.68□□□□□ -0.38
GPN3-202ENST00000537466 HYPMO75409 117 aa12.68□□□□□ -0.38
GPN3-202ENST00000537466 CA1P00915 261 aaPredicted RBP12.68□□□□□ -0.38
GPN3-202ENST00000537466 LYL1P12980 280 aa12.68□□□□□ -0.38
GPN3-202ENST00000537466 ZFAND6Q6FIF0 208 aa12.68□□□□□ -0.38
GPN3-202ENST00000537466 PATE2Q6UY27 113 aa12.68□□□□□ -0.38
GPN3-202ENST00000537466 UHRF2Q96PU4 802 aa12.68□□□□□ -0.38
GPN3-202ENST00000537466 SLC25A39Q9BZJ4 359 aaPredicted RBP12.68□□□□□ -0.38
GPN3-202ENST00000537466 ARL6Q9H0F7 186 aa12.68□□□□□ -0.38
GPN3-202ENST00000537466 OR5AC2Q9NZP5 309 aa12.68□□□□□ -0.38
GPN3-202ENST00000537466 HIGD1AQ9Y241 93 aa12.68□□□□□ -0.38
GPN3-202ENST00000537466 STARD9Q9P2P6 4700 aa12.67□□□□□ -0.38
GPN3-202ENST00000537466 H0YIZ8 118 aa12.67□□□□□ -0.38
GPN3-202ENST00000537466 SSNA1O43805 119 aa12.67□□□□□ -0.38
GPN3-202ENST00000537466 OR5G3P0C626 314 aa12.67□□□□□ -0.38
GPN3-202ENST00000537466 DEFB1P60022 68 aa12.67□□□□□ -0.38
GPN3-202ENST00000537466 ZNF546Q86UE3 836 aa12.67□□□□□ -0.38
GPN3-202ENST00000537466 SHANK2-AS3Q9BTD1 123 aa12.67□□□□□ -0.38
GPN3-202ENST00000537466 GIG44P09565 113 aaPredicted RBP12.66□□□□□ -0.38
GPN3-202ENST00000537466 RAP2BP61225 183 aa12.66□□□□□ -0.38
GPN3-202ENST00000537466 VWC2Q2TAL6 325 aa12.66□□□□□ -0.38
GPN3-202ENST00000537466 STX12Q86Y82 276 aa12.66□□□□□ -0.38
GPN3-202ENST00000537466 UQCC1Q9NVA1 299 aa12.66□□□□□ -0.38
GPN3-202ENST00000537466 A0A0J9YWU9 116 aa12.65□□□□□ -0.38
GPN3-202ENST00000537466 UBE2L5PA0A1B0GUS4 154 aa12.65□□□□□ -0.38
GPN3-202ENST00000537466 PTTG1O95997 202 aa12.65□□□□□ -0.38
GPN3-202ENST00000537466 C4BPBP20851 252 aa12.65□□□□□ -0.38
GPN3-202ENST00000537466 S100A11P31949 105 aa12.65□□□□□ -0.38
GPN3-202ENST00000537466 GALR1P47211 349 aa12.65□□□□□ -0.38
GPN3-202ENST00000537466 PSMB3P49720 205 aa12.65□□□□□ -0.38
GPN3-202ENST00000537466 GDF5OSQ5U4N7 250 aa12.65□□□□□ -0.38
GPN3-202ENST00000537466 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.65□□□□□ -0.38
GPN3-202ENST00000537466 LINC00052Q96N35 136 aa12.65□□□□□ -0.38
GPN3-202ENST00000537466 RSG1Q9BU20 258 aa12.65□□□□□ -0.38
GPN3-202ENST00000537466 ARV1Q9H2C2 271 aa12.65□□□□□ -0.38
GPN3-202ENST00000537466 WDR83OSQ9Y284 106 aa12.65□□□□□ -0.38
GPN3-202ENST00000537466 RLN2P04090 185 aa12.65□□□□□ -0.38
GPN3-202ENST00000537466 S100A7P31151 101 aa12.65□□□□□ -0.38
GPN3-202ENST00000537466 CAMLGP49069 296 aa12.65□□□□□ -0.38
GPN3-202ENST00000537466 HBG1P69891 147 aa12.65□□□□□ -0.38
GPN3-202ENST00000537466 HBG2P69892 147 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms