RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 IGLC1P0CG04 106 aa11.4□□□□□ -0.58
USP44-203ENST00000537435 OR2D3Q8NGH3 330 aa11.4□□□□□ -0.58
USP44-203ENST00000537435 PRSS22Q9GZN4 317 aa11.4□□□□□ -0.58
USP44-203ENST00000537435 WNT10AQ9GZT5 417 aa11.4□□□□□ -0.58
USP44-203ENST00000537435 MALRD1Q5VYJ5 2156 aa11.4□□□□□ -0.58
USP44-203ENST00000537435 ZFHX2Q9C0A1 2572 aaPredicted RBP11.4□□□□□ -0.58
USP44-203ENST00000537435 APC2O95996 2303 aa11.4□□□□□ -0.58
USP44-203ENST00000537435 PPIAL4CA0A0B4J2A2 164 aa11.4□□□□□ -0.59
USP44-203ENST00000537435 P01737 135 aa11.4□□□□□ -0.59
USP44-203ENST00000537435 PPIAL4GP0DN37 164 aa11.4□□□□□ -0.59
USP44-203ENST00000537435 DCHS1Q96JQ0 3298 aa11.39□□□□□ -0.59
USP44-203ENST00000537435 C19orf71A6NCJ1 209 aa11.39□□□□□ -0.59
USP44-203ENST00000537435 ZNF25P17030 456 aaPredicted RBP11.39□□□□□ -0.59
USP44-203ENST00000537435 HBBP68871 147 aa11.39□□□□□ -0.59
USP44-203ENST00000537435 BATFQ16520 125 aa11.39□□□□□ -0.59
USP44-203ENST00000537435 RNASEKQ6P5S7 137 aaKnown RBP11.39□□□□□ -0.59
USP44-203ENST00000537435 LINC01560Q8TB33 94 aa11.39□□□□□ -0.59
USP44-203ENST00000537435 GTSF1Q8WW33 167 aa11.39□□□□□ -0.59
USP44-203ENST00000537435 A6NNC1 897 aa11.38□□□□□ -0.59
USP44-203ENST00000537435 A8MWL6 223 aa11.38□□□□□ -0.59
USP44-203ENST00000537435 I3L2K1 104 aa11.38□□□□□ -0.59
USP44-203ENST00000537435 RBPJQ06330 500 aa11.38□□□□□ -0.59
USP44-203ENST00000537435 PLGLAQ15195 96 aa11.38□□□□□ -0.59
USP44-203ENST00000537435 SLC25A39Q9BZJ4 359 aaPredicted RBP11.38□□□□□ -0.59
USP44-203ENST00000537435 ZNF492Q9P255 531 aa11.38□□□□□ -0.59
USP44-203ENST00000537435 KALRNO60229 2985 aa11.38□□□□□ -0.59
USP44-203ENST00000537435 PIEZO2Q9H5I5 2752 aa11.38□□□□□ -0.59
USP44-203ENST00000537435 M0R2Z0 102 aa11.38□□□□□ -0.59
USP44-203ENST00000537435 RBP4P02753 201 aa11.38□□□□□ -0.59
USP44-203ENST00000537435 MMDQ15546 238 aa11.38□□□□□ -0.59
USP44-203ENST00000537435 CT83Q5H943 113 aa11.38□□□□□ -0.59
USP44-203ENST00000537435 LCN12Q6JVE5 192 aa11.38□□□□□ -0.59
USP44-203ENST00000537435 DAZAP1Q96EP5 407 aaKnown RBP11.38□□□□□ -0.59
USP44-203ENST00000537435 PGLYRP4Q96LB8 373 aa11.38□□□□□ -0.59
USP44-203ENST00000537435 RASL11BQ9BPW5 248 aa11.38□□□□□ -0.59
USP44-203ENST00000537435 ABCA1O95477 2261 aa11.38□□□□□ -0.59
USP44-203ENST00000537435 TRAV8-1A0A0A6YYK1 113 aa11.37□□□□□ -0.59
USP44-203ENST00000537435 ZNF124Q15973 351 aa11.37□□□□□ -0.59
USP44-203ENST00000537435 ATOH7Q8N100 152 aa11.37□□□□□ -0.59
USP44-203ENST00000537435 MUC15Q8N387 334 aa11.37□□□□□ -0.59
USP44-203ENST00000537435 OTORQ9NRC9 128 aa11.37□□□□□ -0.59
USP44-203ENST00000537435 POLEQ07864 2286 aa11.37□□□□□ -0.59
USP44-203ENST00000537435 FAM181BA6NEQ2 426 aa11.37□□□□□ -0.59
USP44-203ENST00000537435 TOX4O94842 621 aa11.37□□□□□ -0.59
USP44-203ENST00000537435 EXOC3-AS1Q8N2X6 119 aa11.37□□□□□ -0.59
USP44-203ENST00000537435 VKORC1Q9BQB6 163 aa11.37□□□□□ -0.59
USP44-203ENST00000537435 UQCR10Q9UDW1 63 aa11.37□□□□□ -0.59
USP44-203ENST00000537435 IGLC2P0DOY2 106 aa11.36□□□□□ -0.59
USP44-203ENST00000537435 IGLC3P0DOY3 106 aa11.36□□□□□ -0.59
USP44-203ENST00000537435 CD24P25063 80 aa11.36□□□□□ -0.59
USP44-203ENST00000537435 EBLN2Q6P2I7 272 aa11.36□□□□□ -0.59
USP44-203ENST00000537435 Q86TA4 180 aa11.36□□□□□ -0.59
USP44-203ENST00000537435 CIARTQ8N365 385 aaPredicted RBP11.36□□□□□ -0.59
USP44-203ENST00000537435 TMEM14CQ9P0S9 112 aa11.36□□□□□ -0.59
USP44-203ENST00000537435 CNIH1O95406 144 aa11.36□□□□□ -0.59
USP44-203ENST00000537435 LDLRAD2Q5SZI1 272 aa11.36□□□□□ -0.59
USP44-203ENST00000537435 URB1-AS1Q96HZ7 61 aa11.36□□□□□ -0.59
USP44-203ENST00000537435 RBM14Q96PK6 669 aaKnown RBP11.36□□□□□ -0.59
USP44-203ENST00000537435 ONECUT1Q9UBC0 465 aa11.36□□□□□ -0.59
USP44-203ENST00000537435 LY6LH3BQJ8 138 aa11.35□□□□□ -0.59
USP44-203ENST00000537435 IGKV1-17P01599 117 aa11.35□□□□□ -0.59
USP44-203ENST00000537435 FOXA3P55318 350 aaPredicted RBP11.35□□□□□ -0.59
USP44-203ENST00000537435 MAJINQ3KP22 176 aa11.35□□□□□ -0.59
USP44-203ENST00000537435 GOLT1AQ6ZVE7 132 aa11.35□□□□□ -0.59
USP44-203ENST00000537435 TXN2Q99757 166 aa11.35□□□□□ -0.59
USP44-203ENST00000537435 RNF5Q99942 180 aa11.35□□□□□ -0.59
USP44-203ENST00000537435 LPAR2Q9HBW0 351 aa11.35□□□□□ -0.59
USP44-203ENST00000537435 SOX21Q9Y651 276 aaPredicted RBP11.35□□□□□ -0.59
USP44-203ENST00000537435 SPTBN2O15020 2390 aa11.35□□□□□ -0.59
USP44-203ENST00000537435 TIMM23O14925 209 aa11.35□□□□□ -0.59
USP44-203ENST00000537435 COL8A1P27658 744 aa11.35□□□□□ -0.59
USP44-203ENST00000537435 PMCHL1Q16048 86 aa11.35□□□□□ -0.59
USP44-203ENST00000537435 ZNF672Q499Z4 452 aaPredicted RBP11.35□□□□□ -0.59
USP44-203ENST00000537435 RBPMS2Q6ZRY4 209 aaKnown RBP11.35□□□□□ -0.59
USP44-203ENST00000537435 Q71RC1 249 aaPredicted RBP11.35□□□□□ -0.59
USP44-203ENST00000537435 PRNTQ86SH4 94 aa11.35□□□□□ -0.59
USP44-203ENST00000537435 GFRA4Q9GZZ7 299 aa11.35□□□□□ -0.59
USP44-203ENST00000537435 FAM90A27PA6NNH2 459 aa11.34□□□□□ -0.59
USP44-203ENST00000537435 NPIPB6E9PJ23 425 aa11.34□□□□□ -0.59
USP44-203ENST00000537435 IGLV2-11P01706 119 aa11.34□□□□□ -0.59
USP44-203ENST00000537435 Q56UQ5 140 aa11.34□□□□□ -0.59
USP44-203ENST00000537435 Q6ZN92 141 aa11.34□□□□□ -0.59
USP44-203ENST00000537435 KLHDC1Q8N7A1 406 aa11.34□□□□□ -0.59
USP44-203ENST00000537435 OR8B3Q8NGG8 313 aa11.34□□□□□ -0.59
USP44-203ENST00000537435 OR8B2Q96RD0 313 aa11.34□□□□□ -0.59
USP44-203ENST00000537435 TMEM208Q9BTX3 173 aa11.34□□□□□ -0.59
USP44-203ENST00000537435 C2orf70A6NJV1 201 aa11.34□□□□□ -0.59
USP44-203ENST00000537435 K7EIM0 57 aa11.34□□□□□ -0.59
USP44-203ENST00000537435 M0QZ24 198 aa11.34□□□□□ -0.59
USP44-203ENST00000537435 SIAH2O43255 324 aa11.34□□□□□ -0.59
USP44-203ENST00000537435 BTF3P20290 206 aaKnown RBP11.34□□□□□ -0.59
USP44-203ENST00000537435 GRNP28799 593 aaKnown RBP11.34□□□□□ -0.59
USP44-203ENST00000537435 NBL1P41271 181 aa11.34□□□□□ -0.59
USP44-203ENST00000537435 KIR3DL3Q8N743 410 aa11.33□□□□□ -0.6
USP44-203ENST00000537435 SRSF8Q9BRL6 282 aaKnown RBP11.33□□□□□ -0.6
USP44-203ENST00000537435 SH2D7A6NKC9 451 aaPredicted RBP11.33□□□□□ -0.6
USP44-203ENST00000537435 DLEU1O43261 78 aa11.33□□□□□ -0.6
USP44-203ENST00000537435 LIPFP07098 398 aa11.33□□□□□ -0.6
USP44-203ENST00000537435 HNRNPA3P51991 378 aaKnown RBP11.33□□□□□ -0.6
USP44-203ENST00000537435 FOXC1Q12948 553 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms