RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 BAALC-AS2P0C853 105 aa1.85□□□□□ -2.11
PRKDC-208ENST00000536710 SSR2P43308 183 aa1.85□□□□□ -2.11
PRKDC-208ENST00000536710 ARF6P62330 175 aa1.85□□□□□ -2.11
PRKDC-208ENST00000536710 TSNQ15631 228 aaKnown RBP1.85□□□□□ -2.11
PRKDC-208ENST00000536710 C10orf105Q8TEF2 133 aa1.85□□□□□ -2.11
PRKDC-208ENST00000536710 TRABDQ9H4I3 376 aa1.85□□□□□ -2.11
PRKDC-208ENST00000536710 CAMSAP2Q08AD1 1489 aa1.85□□□□□ -2.11
PRKDC-208ENST00000536710 PRDM15P57071 1507 aaPredicted RBP1.85□□□□□ -2.11
PRKDC-208ENST00000536710 KDM5DQ9BY66 1539 aa1.85□□□□□ -2.11
PRKDC-208ENST00000536710 ZFHX2Q9C0A1 2572 aaPredicted RBP1.85□□□□□ -2.11
PRKDC-208ENST00000536710 SYNMO15061 1565 aa1.85□□□□□ -2.11
PRKDC-208ENST00000536710 CR1P17927 2039 aa1.84□□□□□ -2.11
PRKDC-208ENST00000536710 CLIP1P30622 1438 aa1.84□□□□□ -2.11
PRKDC-208ENST00000536710 CEP162Q5TB80 1403 aa1.84□□□□□ -2.11
PRKDC-208ENST00000536710 UHRF1BP1Q6BDS2 1440 aa1.84□□□□□ -2.11
PRKDC-208ENST00000536710 CNTLNQ9NXG0 1405 aa1.84□□□□□ -2.11
PRKDC-208ENST00000536710 IQGAP1P46940 1657 aa1.84□□□□□ -2.11
PRKDC-208ENST00000536710 NUMA1Q14980 2115 aa1.84□□□□□ -2.11
PRKDC-208ENST00000536710 MED14O60244 1454 aa1.84□□□□□ -2.11
PRKDC-208ENST00000536710 PLEKHH2Q8IVE3 1493 aa1.84□□□□□ -2.11
PRKDC-208ENST00000536710 IGKV3-7A0A075B6H7 116 aa1.84□□□□□ -2.11
PRKDC-208ENST00000536710 TRAV4A0A0B4J268 109 aa1.84□□□□□ -2.11
PRKDC-208ENST00000536710 OR2T1O43869 369 aa1.84□□□□□ -2.11
PRKDC-208ENST00000536710 CST8O60676 142 aa1.84□□□□□ -2.11
PRKDC-208ENST00000536710 PROSCO94903 275 aa1.84□□□□□ -2.11
PRKDC-208ENST00000536710 LYNX1P0DP58 116 aa1.84□□□□□ -2.11
PRKDC-208ENST00000536710 ATP5G3P48201 142 aa1.84□□□□□ -2.11
PRKDC-208ENST00000536710 CTAG1AP78358 180 aa1.84□□□□□ -2.11
PRKDC-208ENST00000536710 KRR1Q13601 381 aaKnown RBP1.84□□□□□ -2.11
PRKDC-208ENST00000536710 BRMS1LQ5PSV4 323 aa1.84□□□□□ -2.11
PRKDC-208ENST00000536710 ADAT3Q96EY9 351 aaPredicted RBP1.84□□□□□ -2.11
PRKDC-208ENST00000536710 RNF122Q9H9V4 155 aa1.84□□□□□ -2.11
PRKDC-208ENST00000536710 SNURFQ9Y675 71 aa1.84□□□□□ -2.11
PRKDC-208ENST00000536710 MAP3K1Q13233 1512 aa1.84□□□□□ -2.11
PRKDC-208ENST00000536710 PIK3C2BO00750 1634 aa1.84□□□□□ -2.12
PRKDC-208ENST00000536710 A2ML1A8K2U0 1454 aa1.83□□□□□ -2.12
PRKDC-208ENST00000536710 A2MP01023 1474 aa1.83□□□□□ -2.12
PRKDC-208ENST00000536710 PZPP20742 1482 aa1.83□□□□□ -2.12
PRKDC-208ENST00000536710 TRBV19A0A075B6N1 114 aa1.83□□□□□ -2.12
PRKDC-208ENST00000536710 IGKV1-9A0A0C4DH69 117 aa1.83□□□□□ -2.12
PRKDC-208ENST00000536710 C2orf70A6NJV1 201 aa1.83□□□□□ -2.12
PRKDC-208ENST00000536710 ANGP03950 147 aaKnown RBP1.83□□□□□ -2.12
PRKDC-208ENST00000536710 CYBAP13498 195 aa1.83□□□□□ -2.12
PRKDC-208ENST00000536710 MIFP14174 115 aa1.83□□□□□ -2.12
PRKDC-208ENST00000536710 IL9P15248 144 aa1.83□□□□□ -2.12
PRKDC-208ENST00000536710 HSPE1P61604 102 aaKnown RBP1.83□□□□□ -2.12
PRKDC-208ENST00000536710 OR2T10Q8NGZ9 312 aa1.83□□□□□ -2.12
PRKDC-208ENST00000536710 STOML2Q9UJZ1 356 aa1.83□□□□□ -2.12
PRKDC-208ENST00000536710 UGGT1Q9NYU2 1555 aa1.83□□□□□ -2.12
PRKDC-208ENST00000536710 TET3O43151 1660 aa1.83□□□□□ -2.12
PRKDC-208ENST00000536710 GCC2Q8IWJ2 1684 aa1.83□□□□□ -2.12
PRKDC-208ENST00000536710 NCOA2Q15596 1464 aa1.82□□□□□ -2.12
PRKDC-208ENST00000536710 CCDC141Q6ZP82 1450 aa1.82□□□□□ -2.12
PRKDC-208ENST00000536710 ABCC3O15438 1527 aa1.82□□□□□ -2.12
PRKDC-208ENST00000536710 SLIT1O75093 1534 aa1.82□□□□□ -2.12
PRKDC-208ENST00000536710 CPS1P31327 1500 aa1.82□□□□□ -2.12
PRKDC-208ENST00000536710 LMTK2Q8IWU2 1503 aa1.82□□□□□ -2.12
PRKDC-208ENST00000536710 NWD1Q149M9 1564 aa1.82□□□□□ -2.12
PRKDC-208ENST00000536710 MED1Q15648 1581 aaPredicted RBP1.82□□□□□ -2.12
PRKDC-208ENST00000536710 OR1I1O60431 355 aa1.82□□□□□ -2.12
PRKDC-208ENST00000536710 IFNA7P01567 189 aa1.82□□□□□ -2.12
PRKDC-208ENST00000536710 CCDC94Q9BW85 323 aaPredicted RBP1.82□□□□□ -2.12
PRKDC-208ENST00000536710 C6orf62Q9GZU0 229 aaPredicted RBP1.82□□□□□ -2.12
PRKDC-208ENST00000536710 TMEM133Q9H2Q1 129 aa1.82□□□□□ -2.12
PRKDC-208ENST00000536710 CCDC88AQ3V6T2 1871 aa1.82□□□□□ -2.12
PRKDC-208ENST00000536710 ERVK-7P63135 1459 aa1.82□□□□□ -2.12
PRKDC-208ENST00000536710 LRRC9Q6ZRR7 1453 aa1.82□□□□□ -2.12
PRKDC-208ENST00000536710 NLRP1Q9C000 1473 aa1.82□□□□□ -2.12
PRKDC-208ENST00000536710 SHANK2Q9UPX8 1470 aa1.82□□□□□ -2.12
PRKDC-208ENST00000536710 EP400Q96L91 3159 aa1.82□□□□□ -2.12
PRKDC-208ENST00000536710 EFCAB6Q5THR3 1501 aa1.81□□□□□ -2.12
PRKDC-208ENST00000536710 DUOX2Q9NRD8 1548 aa1.81□□□□□ -2.12
PRKDC-208ENST00000536710 UNC13BO14795 1591 aa1.81□□□□□ -2.12
PRKDC-208ENST00000536710 LAMC1P11047 1609 aa1.81□□□□□ -2.12
PRKDC-208ENST00000536710 PTPN23Q9H3S7 1636 aa1.81□□□□□ -2.12
PRKDC-208ENST00000536710 E9PCH4 1651 aa1.81□□□□□ -2.12
PRKDC-208ENST00000536710 RNASE3P12724 160 aaKnown RBP1.81□□□□□ -2.12
PRKDC-208ENST00000536710 RHOGP84095 191 aa1.81□□□□□ -2.12
PRKDC-208ENST00000536710 ESRGQ1W209 222 aa1.81□□□□□ -2.12
PRKDC-208ENST00000536710 BCL2L15Q5TBC7 163 aa1.81□□□□□ -2.12
PRKDC-208ENST00000536710 DHRS4L2Q6PKH6 230 aa1.81□□□□□ -2.12
PRKDC-208ENST00000536710 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.81□□□□□ -2.12
PRKDC-208ENST00000536710 OR4C6Q8NH72 309 aa1.81□□□□□ -2.12
PRKDC-208ENST00000536710 STAG3L4Q8TBR4 150 aa1.81□□□□□ -2.12
PRKDC-208ENST00000536710 SLAMF6Q96DU3 332 aa1.81□□□□□ -2.12
PRKDC-208ENST00000536710 IMUPQ9GZP8 106 aa1.81□□□□□ -2.12
PRKDC-208ENST00000536710 ARHGAP31Q2M1Z3 1444 aa1.81□□□□□ -2.12
PRKDC-208ENST00000536710 VPS8Q8N3P4 1428 aa1.81□□□□□ -2.12
PRKDC-208ENST00000536710 MIA2Q96PC5 1412 aa1.81□□□□□ -2.12
PRKDC-208ENST00000536710 ADGRL2O95490 1459 aa1.81□□□□□ -2.12
PRKDC-208ENST00000536710 LRRC7Q96NW7 1537 aa1.81□□□□□ -2.12
PRKDC-208ENST00000536710 TMEM131LA2VDJ0 1609 aa1.8□□□□□ -2.12
PRKDC-208ENST00000536710 IQGAP3Q86VI3 1631 aa1.8□□□□□ -2.12
PRKDC-208ENST00000536710 NRXN3Q9Y4C0 1643 aa1.8□□□□□ -2.12
PRKDC-208ENST00000536710 XRN1Q8IZH2 1706 aaKnown RBP1.8□□□□□ -2.12
PRKDC-208ENST00000536710 ATG12O94817 140 aa1.8□□□□□ -2.12
PRKDC-208ENST00000536710 RAB4BP61018 213 aa1.8□□□□□ -2.12
PRKDC-208ENST00000536710 NCALDP61601 193 aa1.8□□□□□ -2.12
PRKDC-208ENST00000536710 RRN3P1Q2M238 152 aa1.8□□□□□ -2.12
PRKDC-208ENST00000536710 LINC00301Q8NCQ3 95 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms