RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 RCHY1Q96PM5 261 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 MLST8Q9BVC4 326 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 PRSS22Q9GZN4 317 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 MEGF9Q9H1U4 602 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 ZNF331Q9NQX6 463 aaPredicted RBP4.58□□□□□ -1.68
VPS33A-203ENST00000536212 C1RLQ9NZP8 487 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 MRPL36Q9P0J6 103 aaKnown RBP4.58□□□□□ -1.68
VPS33A-203ENST00000536212 ZNF492Q9P255 531 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 EPDR1Q9UM22 224 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 ZFP30Q9Y2G7 519 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 PAM16Q9Y3D7 125 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 DOCK7Q96N67 2140 aa4.58□□□□□ -1.68
VPS33A-203ENST00000536212 CEP290O15078 2479 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 USF3Q68DE3 2245 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 PPIAL4EA0A075B759 164 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 TRBV6-1A0A0K0K1D8 114 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 A0A1W2PPI3 338 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 IGLC7A0M8Q6 106 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 C19orf71A6NCJ1 209 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 PPIAL4DF5H284 164 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 NDUFB3O43676 98 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 SPINK4O60575 86 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 TOMM40O96008 361 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 PPIAL4FP0DN26 164 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 IGLC2P0DOY2 106 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 IGLC3P0DOY3 106 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 PYYP10082 97 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 HIST1H1EP10412 219 aaKnown RBP4.57□□□□□ -1.68
VPS33A-203ENST00000536212 LOXP28300 417 aaPredicted RBP4.57□□□□□ -1.68
VPS33A-203ENST00000536212 TCL1AP56279 114 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 SLC35B1P78383 322 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 PMCHL1Q16048 86 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 VMA21Q3ZAQ7 101 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 TMEM155Q4W5P6 130 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 C10orf55Q5SWW7 151 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 COL5A1-AS1Q5SY13 56 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 FAM162BQ5T6X4 162 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 TMEM108Q6UXF1 575 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 ZNF841Q6ZN19 808 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 TCF24Q7RTU0 167 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 ASCL5Q7RTU5 278 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 C11orf42Q8N5U0 333 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 NUP35Q8NFH5 326 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 ORAOV1Q8WV07 137 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 LINC00479Q96M42 142 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 GPR82Q96P67 336 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 ALKBH7Q9BT30 221 aaPredicted RBP4.57□□□□□ -1.68
VPS33A-203ENST00000536212 TPPP3Q9BW30 176 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 SAP30LQ9HAJ7 183 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 SPANXA1Q9NS26 97 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 SERTAD4Q9NUC0 356 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 CTSZQ9UBR2 303 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 UQCR10Q9UDW1 63 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 PPIAL4AQ9Y536 164 aa4.57□□□□□ -1.68
VPS33A-203ENST00000536212 SOX21Q9Y651 276 aaPredicted RBP4.57□□□□□ -1.68
VPS33A-203ENST00000536212 A4D1N5 150 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 FAM231BA6NCW3 169 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 VWC2LB2RUY7 222 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 C16orf97H3BN30 126 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 CORTO00230 105 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 HYPMO75409 117 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 CA1P00915 261 aaPredicted RBP4.56□□□□□ -1.68
VPS33A-203ENST00000536212 NPSP0C0P6 89 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 PMCHP20382 165 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 REG1BP48304 166 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 MFAP2P55001 183 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 MFAP4P55083 255 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 CCL8P80075 99 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 DIAPH2-AS1Q14236 149 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 MMDQ15546 238 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 TNXAQ16473 311 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 SPATA45Q537H7 98 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 LRRC10Q5BKY1 277 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 CCDC144NLQ6NUI1 221 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 LYPD2Q6UXB3 125 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 KLHDC1Q8N7A1 406 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 C5orf17Q8NAS9 161 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 GATD1Q8NB37 220 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 NHLRC2Q8NBF2 726 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 SYT8Q8NBV8 401 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 OR8B3Q8NGG8 313 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 OR8B2Q96RD0 313 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 FAM103A1Q9BTL3 118 aaKnown RBP4.56□□□□□ -1.68
VPS33A-203ENST00000536212 SSBP3Q9BWW4 388 aaPredicted RBP4.56□□□□□ -1.68
VPS33A-203ENST00000536212 CLEC7AQ9BXN2 247 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 GFRA4Q9GZZ7 299 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 LPAR2Q9HBW0 351 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 TNFRSF19Q9NS68 423 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 TMEM14CQ9P0S9 112 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 MRPS16Q9Y3D3 137 aaKnown RBP4.56□□□□□ -1.68
VPS33A-203ENST00000536212 XIRP2A4UGR9 3374 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 HCFC1P51610 2035 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 SZT2Q5T011 3432 aa4.56□□□□□ -1.68
VPS33A-203ENST00000536212 DOCK11Q5JSL3 2073 aa4.55□□□□□ -1.68
VPS33A-203ENST00000536212 CNTRLQ7Z7A1 2325 aa4.55□□□□□ -1.68
VPS33A-203ENST00000536212 TRAV9-2A0A087WT02 112 aa4.55□□□□□ -1.68
VPS33A-203ENST00000536212 PGPA6NDG6 321 aa4.55□□□□□ -1.68
VPS33A-203ENST00000536212 C2orf70A6NJV1 201 aa4.55□□□□□ -1.68
VPS33A-203ENST00000536212 HIGD1CA8MV81 97 aa4.55□□□□□ -1.68
VPS33A-203ENST00000536212 A8MWL6 223 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms