RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 RNASE2P10153 161 aaKnown RBP14.47□□□□□ -0.09
RAB40C-203ENST00000535977 SSBP3Q9BWW4 388 aaPredicted RBP14.47□□□□□ -0.09
RAB40C-203ENST00000535977 MRPL20Q9BYC9 149 aaKnown RBP14.47□□□□□ -0.09
RAB40C-203ENST00000535977 NDUFA4L2Q9NRX3 87 aa14.47□□□□□ -0.09
RAB40C-203ENST00000535977 CACNA1AO00555 2505 aa14.47□□□□□ -0.09
RAB40C-203ENST00000535977 TNFRSF13BO14836 293 aaPredicted RBP14.47□□□□□ -0.09
RAB40C-203ENST00000535977 CD69Q07108 199 aa14.47□□□□□ -0.09
RAB40C-203ENST00000535977 SSBP4Q9BWG4 385 aaPredicted RBP14.47□□□□□ -0.09
RAB40C-203ENST00000535977 MYOD1P15172 320 aa14.46□□□□□ -0.09
RAB40C-203ENST00000535977 PRR31Q5SQ13 230 aa14.46□□□□□ -0.09
RAB40C-203ENST00000535977 PET117Q6UWS5 81 aa14.46□□□□□ -0.09
RAB40C-203ENST00000535977 TMEM167AQ8TBQ9 72 aa14.46□□□□□ -0.09
RAB40C-203ENST00000535977 SNRNP40Q96DI7 357 aaKnown RBP14.46□□□□□ -0.09
RAB40C-203ENST00000535977 KAAG1Q9UBP8 84 aa14.46□□□□□ -0.09
RAB40C-203ENST00000535977 SMPXQ9UHP9 88 aa14.46□□□□□ -0.09
RAB40C-203ENST00000535977 IGLV2-8P01709 118 aa14.46□□□□□ -0.09
RAB40C-203ENST00000535977 MFAP2P55001 183 aa14.46□□□□□ -0.09
RAB40C-203ENST00000535977 RND1Q92730 232 aa14.46□□□□□ -0.09
RAB40C-203ENST00000535977 NAA38Q9BRA0 125 aaKnown RBP14.46□□□□□ -0.09
RAB40C-203ENST00000535977 C1RLQ9NZP8 487 aa14.46□□□□□ -0.09
RAB40C-203ENST00000535977 SSUH2Q9Y2M2 353 aa14.46□□□□□ -0.09
RAB40C-203ENST00000535977 AZU1P20160 251 aa14.45□□□□□ -0.1
RAB40C-203ENST00000535977 REG1BP48304 166 aa14.45□□□□□ -0.1
RAB40C-203ENST00000535977 SUB1P53999 127 aaKnown RBP eCLIP14.45□□□□□ -0.1
RAB40C-203ENST00000535977 OR10X1Q8NGY0 326 aa14.45□□□□□ -0.1
RAB40C-203ENST00000535977 WIPF2Q8TF74 440 aaPredicted RBP14.45□□□□□ -0.1
RAB40C-203ENST00000535977 MCRIP2Q9BUT9 160 aaKnown RBP14.45□□□□□ -0.1
RAB40C-203ENST00000535977 MRPL32Q9BYC8 188 aaKnown RBP14.45□□□□□ -0.1
RAB40C-203ENST00000535977 PLCE1Q9P212 2302 aa14.45□□□□□ -0.1
RAB40C-203ENST00000535977 K7EP34 96 aa14.45□□□□□ -0.1
RAB40C-203ENST00000535977 UQCRFS1P47985 274 aa14.45□□□□□ -0.1
RAB40C-203ENST00000535977 ZNF137PP52743 207 aa14.44□□□□□ -0.1
RAB40C-203ENST00000535977 PSG5Q15238 335 aa14.44□□□□□ -0.1
RAB40C-203ENST00000535977 MIR17HGQ75NE6 70 aa14.44□□□□□ -0.1
RAB40C-203ENST00000535977 RNASE6Q93091 150 aaKnown RBP14.44□□□□□ -0.1
RAB40C-203ENST00000535977 AP1S3Q96PC3 154 aa14.44□□□□□ -0.1
RAB40C-203ENST00000535977 PPIAL4CA0A0B4J2A2 164 aa14.44□□□□□ -0.1
RAB40C-203ENST00000535977 CCL3L1P16619 93 aa14.44□□□□□ -0.1
RAB40C-203ENST00000535977 MC5RP33032 325 aa14.44□□□□□ -0.1
RAB40C-203ENST00000535977 C2orf91Q6ZV80 131 aa14.44□□□□□ -0.1
RAB40C-203ENST00000535977 H1FXQ92522 213 aaKnown RBP14.44□□□□□ -0.1
RAB40C-203ENST00000535977 CCL17Q92583 94 aa14.44□□□□□ -0.1
RAB40C-203ENST00000535977 TMEM191AQ9H0A3 160 aa14.44□□□□□ -0.1
RAB40C-203ENST00000535977 GTSF1LQ9H1H1 148 aa14.44□□□□□ -0.1
RAB40C-203ENST00000535977 MGAQ8IWI9 3026 aa14.44□□□□□ -0.1
RAB40C-203ENST00000535977 SNAI2O43623 268 aa14.43□□□□□ -0.1
RAB40C-203ENST00000535977 HTR1DP28221 377 aa14.43□□□□□ -0.1
RAB40C-203ENST00000535977 NHLRC2Q8NBF2 726 aa14.43□□□□□ -0.1
RAB40C-203ENST00000535977 ICE1Q9Y2F5 2266 aa14.43□□□□□ -0.1
RAB40C-203ENST00000535977 C9orf118A6NHY6 69 aa14.43□□□□□ -0.1
RAB40C-203ENST00000535977 H3BUT2 72 aa14.43□□□□□ -0.1
RAB40C-203ENST00000535977 PPOXP50336 477 aa14.43□□□□□ -0.1
RAB40C-203ENST00000535977 Q8NA96 180 aa14.43□□□□□ -0.1
RAB40C-203ENST00000535977 ACTL6BO94805 426 aa14.43□□□□□ -0.1
RAB40C-203ENST00000535977 SMAGPQ0VAQ4 97 aa14.43□□□□□ -0.1
RAB40C-203ENST00000535977 ZNRD1Q9P1U0 126 aa14.43□□□□□ -0.1
RAB40C-203ENST00000535977 IGHV1-24A0A0C4DH33 117 aa14.42□□□□□ -0.1
RAB40C-203ENST00000535977 A0A1B0GV72 72 aa14.42□□□□□ -0.1
RAB40C-203ENST00000535977 A0A1W2PRE2 83 aa14.42□□□□□ -0.1
RAB40C-203ENST00000535977 C8orf88P0DMB2 117 aa14.42□□□□□ -0.1
RAB40C-203ENST00000535977 SCGB1A1P11684 91 aa14.42□□□□□ -0.1
RAB40C-203ENST00000535977 SEC11AP67812 179 aa14.42□□□□□ -0.1
RAB40C-203ENST00000535977 TMEM97Q5BJF2 176 aa14.42□□□□□ -0.1
RAB40C-203ENST00000535977 RASL11AQ6T310 242 aa14.42□□□□□ -0.1
RAB40C-203ENST00000535977 OR9G1Q8NH87 305 aa14.42□□□□□ -0.1
RAB40C-203ENST00000535977 SCNM1Q9BWG6 230 aa14.42□□□□□ -0.1
RAB40C-203ENST00000535977 DYNLRB1Q9NP97 96 aa14.42□□□□□ -0.1
RAB40C-203ENST00000535977 ANKRD11Q6UB99 2663 aaPredicted RBP14.42□□□□□ -0.1
RAB40C-203ENST00000535977 IGKV1OR2-108A0A075B7D4 117 aa14.42□□□□□ -0.1
RAB40C-203ENST00000535977 LEPROTL1O95214 131 aa14.42□□□□□ -0.1
RAB40C-203ENST00000535977 PLP1P60201 277 aa14.42□□□□□ -0.1
RAB40C-203ENST00000535977 VMA21Q3ZAQ7 101 aa14.42□□□□□ -0.1
RAB40C-203ENST00000535977 ZCCHC24Q8N2G6 241 aaKnown RBP14.42□□□□□ -0.1
RAB40C-203ENST00000535977 NPFFR1Q9GZQ6 430 aa14.42□□□□□ -0.1
RAB40C-203ENST00000535977 DSPP15924 2871 aaKnown RBP14.41□□□□□ -0.1
RAB40C-203ENST00000535977 OR2J3O76001 311 aa14.41□□□□□ -0.1
RAB40C-203ENST00000535977 CAMPP49913 170 aa14.41□□□□□ -0.1
RAB40C-203ENST00000535977 NUP35Q8NFH5 326 aa14.41□□□□□ -0.1
RAB40C-203ENST00000535977 H0Y8G0 127 aa14.41□□□□□ -0.1
RAB40C-203ENST00000535977 OR10W1Q8NGF6 305 aa14.41□□□□□ -0.1
RAB40C-203ENST00000535977 OR2K2Q8NGT1 345 aa14.41□□□□□ -0.1
RAB40C-203ENST00000535977 IGF2BP2-AS1Q96M15 143 aa14.41□□□□□ -0.1
RAB40C-203ENST00000535977 SLC25A33Q9BSK2 321 aa14.41□□□□□ -0.1
RAB40C-203ENST00000535977 TMEM155Q4W5P6 130 aa14.4□□□□□ -0.1
RAB40C-203ENST00000535977 OR1L4Q8NGR5 311 aa14.4□□□□□ -0.1
RAB40C-203ENST00000535977 ATP6V0BQ99437 205 aa14.4□□□□□ -0.1
RAB40C-203ENST00000535977 PMCHL2Q9BQD1 86 aa14.4□□□□□ -0.1
RAB40C-203ENST00000535977 MS4A6AQ9H2W1 248 aa14.4□□□□□ -0.1
RAB40C-203ENST00000535977 ZNF355PQ9NSJ1 428 aa14.4□□□□□ -0.1
RAB40C-203ENST00000535977 THYN1Q9P016 225 aa14.4□□□□□ -0.1
RAB40C-203ENST00000535977 H3BRM9 83 aa14.4□□□□□ -0.1
RAB40C-203ENST00000535977 FCN3O75636 299 aa14.4□□□□□ -0.1
RAB40C-203ENST00000535977 DLX6P56179 175 aa14.4□□□□□ -0.1
RAB40C-203ENST00000535977 BPIFA4PQ86YQ2 179 aa14.4□□□□□ -0.1
RAB40C-203ENST00000535977 SHISA9B4DS77 424 aa14.39□□□□□ -0.11
RAB40C-203ENST00000535977 HIST1H1EP10412 219 aaKnown RBP14.39□□□□□ -0.11
RAB40C-203ENST00000535977 LOXP28300 417 aaPredicted RBP14.39□□□□□ -0.11
RAB40C-203ENST00000535977 LYPD2Q6UXB3 125 aa14.39□□□□□ -0.11
RAB40C-203ENST00000535977 MOB3BQ86TA1 216 aa14.39□□□□□ -0.11
RAB40C-203ENST00000535977 OR10AG1Q8NH19 301 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms