RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 ITGB1BP1O14713 200 aa10.74□□□□□ -0.69
HDAC4-214ENST00000535493 CHEK1O14757 476 aa10.74□□□□□ -0.69
HDAC4-214ENST00000535493 PRNTQ86SH4 94 aa10.74□□□□□ -0.69
HDAC4-214ENST00000535493 OR1L4Q8NGR5 311 aa10.74□□□□□ -0.69
HDAC4-214ENST00000535493 DAZAP1Q96EP5 407 aaKnown RBP10.74□□□□□ -0.69
HDAC4-214ENST00000535493 SSUH2Q9Y2M2 353 aa10.74□□□□□ -0.69
HDAC4-214ENST00000535493 FAM106CPP0CH98 169 aa10.74□□□□□ -0.69
HDAC4-214ENST00000535493 MYCNOSP40205 109 aa10.74□□□□□ -0.69
HDAC4-214ENST00000535493 FAM106AQ4KMX7 169 aa10.74□□□□□ -0.69
HDAC4-214ENST00000535493 SLC25A34Q6PIV7 304 aa10.74□□□□□ -0.69
HDAC4-214ENST00000535493 RASL11AQ6T310 242 aa10.74□□□□□ -0.69
HDAC4-214ENST00000535493 TMEM116Q8NCL8 245 aa10.74□□□□□ -0.69
HDAC4-214ENST00000535493 GAL3ST2Q9H3Q3 398 aa10.74□□□□□ -0.69
HDAC4-214ENST00000535493 COL8A1P27658 744 aa10.73□□□□□ -0.69
HDAC4-214ENST00000535493 TMEM200BQ69YZ2 307 aa10.73□□□□□ -0.69
HDAC4-214ENST00000535493 ZNF833PQ6ZTB9 187 aa10.73□□□□□ -0.69
HDAC4-214ENST00000535493 OSR1Q8TAX0 266 aaPredicted RBP10.73□□□□□ -0.69
HDAC4-214ENST00000535493 MLST8Q9BVC4 326 aa10.73□□□□□ -0.69
HDAC4-214ENST00000535493 Q9H3A6 140 aa10.73□□□□□ -0.69
HDAC4-214ENST00000535493 NCR2O95944 276 aa10.73□□□□□ -0.69
HDAC4-214ENST00000535493 UQCRFS1P47985 274 aa10.73□□□□□ -0.69
HDAC4-214ENST00000535493 LYPD2Q6UXB3 125 aa10.73□□□□□ -0.69
HDAC4-214ENST00000535493 GOLT1AQ6ZVE7 132 aa10.73□□□□□ -0.69
HDAC4-214ENST00000535493 FAM222BQ8WU58 562 aa10.73□□□□□ -0.69
HDAC4-214ENST00000535493 IGFBPL1Q8WX77 278 aa10.73□□□□□ -0.69
HDAC4-214ENST00000535493 CCL17Q92583 94 aa10.73□□□□□ -0.69
HDAC4-214ENST00000535493 C17orf77Q96MU5 243 aa10.73□□□□□ -0.69
HDAC4-214ENST00000535493 VPS25Q9BRG1 176 aa10.73□□□□□ -0.69
HDAC4-214ENST00000535493 A8MWL6 223 aa10.72□□□□□ -0.69
HDAC4-214ENST00000535493 K7EP13 123 aa10.72□□□□□ -0.69
HDAC4-214ENST00000535493 OR4C13Q8NGP0 309 aa10.72□□□□□ -0.69
HDAC4-214ENST00000535493 DEFB109BQ30KR1 87 aa10.72□□□□□ -0.69
HDAC4-214ENST00000535493 LRRC10Q5BKY1 277 aa10.72□□□□□ -0.69
HDAC4-214ENST00000535493 OR5AN1Q8NGI8 311 aa10.72□□□□□ -0.69
HDAC4-214ENST00000535493 TRAV8-6A0A0B4J262 113 aa10.71□□□□□ -0.69
HDAC4-214ENST00000535493 LOC389332A0A1B0GUA5 103 aa10.71□□□□□ -0.69
HDAC4-214ENST00000535493 IGLV2-23P01705 113 aa10.71□□□□□ -0.69
HDAC4-214ENST00000535493 TCRAP04437 139 aa10.71□□□□□ -0.69
HDAC4-214ENST00000535493 ARMS2P0C7Q2 107 aa10.71□□□□□ -0.69
HDAC4-214ENST00000535493 HTR1DP28221 377 aa10.71□□□□□ -0.69
HDAC4-214ENST00000535493 CDKN1BP46527 198 aa10.71□□□□□ -0.69
HDAC4-214ENST00000535493 LYZP61626 148 aa10.71□□□□□ -0.69
HDAC4-214ENST00000535493 PRSS22Q9GZN4 317 aa10.71□□□□□ -0.69
HDAC4-214ENST00000535493 IGLV3-9A0A075B6K5 115 aa10.71□□□□□ -0.69
HDAC4-214ENST00000535493 HSBP1L1C9JCN9 74 aa10.71□□□□□ -0.69
HDAC4-214ENST00000535493 PPIAL4DF5H284 164 aa10.71□□□□□ -0.69
HDAC4-214ENST00000535493 CST9LQ9H4G1 147 aa10.71□□□□□ -0.69
HDAC4-214ENST00000535493 RAB9BQ9NP90 201 aa10.71□□□□□ -0.69
HDAC4-214ENST00000535493 S4R3C0 116 aa10.71□□□□□ -0.69
HDAC4-214ENST00000535493 PSG9Q00887 426 aa10.71□□□□□ -0.7
HDAC4-214ENST00000535493 LOXL1Q08397 574 aaPredicted RBP10.71□□□□□ -0.7
HDAC4-214ENST00000535493 RBPMS2Q6ZRY4 209 aaKnown RBP10.71□□□□□ -0.7
HDAC4-214ENST00000535493 ATP5L2Q7Z4Y8 100 aa10.71□□□□□ -0.7
HDAC4-214ENST00000535493 PERPQ96FX8 193 aa10.71□□□□□ -0.7
HDAC4-214ENST00000535493 ST20Q9HBF5 79 aa10.71□□□□□ -0.7
HDAC4-214ENST00000535493 TMSB15BA0A087X1C1 80 aa10.7□□□□□ -0.7
HDAC4-214ENST00000535493 C19orf71A6NCJ1 209 aa10.7□□□□□ -0.7
HDAC4-214ENST00000535493 CRXO43186 299 aaPredicted RBP10.7□□□□□ -0.7
HDAC4-214ENST00000535493 LTAP01374 205 aa10.7□□□□□ -0.7
HDAC4-214ENST00000535493 ANKRD39Q53RE8 183 aa10.7□□□□□ -0.7
HDAC4-214ENST00000535493 TMEM167AQ8TBQ9 72 aa10.7□□□□□ -0.7
HDAC4-214ENST00000535493 SRSF12Q8WXF0 261 aaKnown RBP10.7□□□□□ -0.7
HDAC4-214ENST00000535493 MAP1LC3CQ9BXW4 147 aa10.7□□□□□ -0.7
HDAC4-214ENST00000535493 LINC00312Q9Y6C7 94 aa10.7□□□□□ -0.7
HDAC4-214ENST00000535493 TRAV30A0A087WSZ9 112 aa10.7□□□□□ -0.7
HDAC4-214ENST00000535493 TRAV17A0A0B4J275 112 aa10.7□□□□□ -0.7
HDAC4-214ENST00000535493 APOHP02749 345 aaPredicted RBP10.7□□□□□ -0.7
HDAC4-214ENST00000535493 GP9P14770 177 aa10.7□□□□□ -0.7
HDAC4-214ENST00000535493 SUB1P53999 127 aaKnown RBP eCLIP10.7□□□□□ -0.7
HDAC4-214ENST00000535493 TIMM23BQ5SRD1 257 aa10.7□□□□□ -0.7
HDAC4-214ENST00000535493 TMEM191AQ9H0A3 160 aa10.7□□□□□ -0.7
HDAC4-214ENST00000535493 SCRT2Q9NQ03 307 aa10.7□□□□□ -0.7
HDAC4-214ENST00000535493 KLF12Q9Y4X4 402 aa10.7□□□□□ -0.7
HDAC4-214ENST00000535493 ARHGAP32A7KAX9 2087 aa10.69□□□□□ -0.7
HDAC4-214ENST00000535493 SPTA1P02549 2419 aa10.69□□□□□ -0.7
HDAC4-214ENST00000535493 ZNF883P0CG24 379 aa10.69□□□□□ -0.7
HDAC4-214ENST00000535493 SAPCD1Q5SSQ6 148 aa10.69□□□□□ -0.7
HDAC4-214ENST00000535493 DEFB125Q8N687 156 aa10.69□□□□□ -0.7
HDAC4-214ENST00000535493 CHRDL1Q9BU40 450 aa10.69□□□□□ -0.7
HDAC4-214ENST00000535493 FAM215AQ9Y5M1 114 aa10.69□□□□□ -0.7
HDAC4-214ENST00000535493 ZFHX2Q9C0A1 2572 aaPredicted RBP10.69□□□□□ -0.7
HDAC4-214ENST00000535493 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.69□□□□□ -0.7
HDAC4-214ENST00000535493 ZNF785A8K8V0 405 aa10.69□□□□□ -0.7
HDAC4-214ENST00000535493 GATA4P43694 442 aa10.69□□□□□ -0.7
HDAC4-214ENST00000535493 ARF6P62330 175 aa10.69□□□□□ -0.7
HDAC4-214ENST00000535493 COTL1Q14019 142 aa10.69□□□□□ -0.7
HDAC4-214ENST00000535493 MRGPRG-AS1Q2M3A8 158 aa10.69□□□□□ -0.7
HDAC4-214ENST00000535493 C5orf17Q8NAS9 161 aa10.69□□□□□ -0.7
HDAC4-214ENST00000535493 OR8A1Q8NGG7 326 aa10.69□□□□□ -0.7
HDAC4-214ENST00000535493 NEU4Q8WWR8 484 aaPredicted RBP10.69□□□□□ -0.7
HDAC4-214ENST00000535493 SH3BGRL2Q9UJC5 107 aa10.69□□□□□ -0.7
HDAC4-214ENST00000535493 TM4SF5O14894 197 aa10.68□□□□□ -0.7
HDAC4-214ENST00000535493 TNFRSF1AP19438 455 aa10.68□□□□□ -0.7
HDAC4-214ENST00000535493 OCIAD2Q56VL3 154 aa10.68□□□□□ -0.7
HDAC4-214ENST00000535493 WFDC3Q8IUB2 231 aa10.68□□□□□ -0.7
HDAC4-214ENST00000535493 THAP8Q8NA92 274 aa10.68□□□□□ -0.7
HDAC4-214ENST00000535493 GUCD1Q96NT3 240 aa10.68□□□□□ -0.7
HDAC4-214ENST00000535493 COLQQ9Y215 455 aaPredicted RBP10.68□□□□□ -0.7
HDAC4-214ENST00000535493 OTOGLQ3ZCN5 2332 aa10.68□□□□□ -0.7
HDAC4-214ENST00000535493 SAP30O75446 220 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms