RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 FAT2Q9NYQ8 4349 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 TRAV8-2A0A0B4J237 113 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 LCE6AA0A183 80 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 IGSF23A1L1A6 192 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 FAM24AA6NFZ4 105 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 ZNF98A6NK75 572 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 CENPXA8MT69 81 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 H0YIZ8 118 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 H3BMM0 161 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 H3BRN7 92 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 DNASE2O00115 360 aaPredicted RBP3.67□□□□□ -1.82
USH1C-210ENST00000534556 MRPS12O15235 138 aaKnown RBP3.67□□□□□ -1.82
USH1C-210ENST00000534556 MED6O75586 246 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 CA1P00915 261 aaPredicted RBP3.67□□□□□ -1.82
USH1C-210ENST00000534556 IL5P05113 134 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 LINC00869P0C866 280 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 ATP5IP56385 69 aaPredicted RBP3.67□□□□□ -1.82
USH1C-210ENST00000534556 RAB11AP62491 216 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 PSMG4Q5JS54 123 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 ACTL10Q5JWF8 245 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 ETFRF1Q6IPR1 90 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 SIGLEC15Q6ZMC9 328 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 CYP2G1PQ6ZSU1 146 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 TMEM144Q7Z5S9 345 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 NRARPQ7Z6K4 114 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 NOXA1Q86UR1 476 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 C12orf45Q8N5I9 185 aaPredicted RBP3.67□□□□□ -1.82
USH1C-210ENST00000534556 Q8NAQ8 132 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 COQ8AQ8NI60 647 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 GRAMD2BQ96HH9 432 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 UHRF2Q96PU4 802 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 MGST2Q99735 147 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 SCRT1Q9BWW7 348 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 DOK5Q9P104 306 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 SLC45A2Q9UMX9 530 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 STRAPQ9Y3F4 350 aaKnown RBP3.67□□□□□ -1.82
USH1C-210ENST00000534556 LSM5Q9Y4Y9 91 aaKnown RBP3.67□□□□□ -1.82
USH1C-210ENST00000534556 DNAH11Q96DT5 4516 aa3.67□□□□□ -1.82
USH1C-210ENST00000534556 ELOA3CA0A087WX78 387 aaPredicted RBP3.66□□□□□ -1.82
USH1C-210ENST00000534556 FAM240BA0A1B0GVZ2 78 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 A0A1W2PS18 150 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 HELTA6NFD8 242 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 A8MTW9 85 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 SNRPGP15A8MWD9 76 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 UBE2CO00762 179 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 CST7O76096 145 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 PRM2P04554 102 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 SNRPCP09234 159 aaKnown RBP3.66□□□□□ -1.82
USH1C-210ENST00000534556 ZNF705DP0CH99 300 aaPredicted RBP3.66□□□□□ -1.82
USH1C-210ENST00000534556 ZNF705BP0CI00 300 aaPredicted RBP3.66□□□□□ -1.82
USH1C-210ENST00000534556 ORM2P19652 201 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 APOC4P55056 127 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 H2BFSP57053 126 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 FXYD7P58549 80 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 PLP1P60201 277 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 NANOS2P60321 138 aaKnown RBP3.66□□□□□ -1.82
USH1C-210ENST00000534556 PAFAH1B2P68402 229 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 DLK1P80370 383 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 SLC38A11Q08AI6 406 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 RAB32Q13637 225 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 PMS2P11Q13670 270 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 ZNF846Q147U1 533 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 AMTNQ6UX39 209 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 RNF182Q8N6D2 247 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 ZNF709Q8N972 641 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 OR11H2Q8NH07 326 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 S100ZQ8WXG8 99 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 TMEM37Q8WXS4 190 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 C2orf50Q96LR7 162 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 CIB3Q96Q77 187 aaPredicted RBP3.66□□□□□ -1.82
USH1C-210ENST00000534556 TMEM231Q9H6L2 316 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 NRN1Q9NPD7 142 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 OR5AC2Q9NZP5 309 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 CACFD1Q9UGQ2 172 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 CELA1Q9UNI1 258 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 RFNGQ9Y644 331 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 HERC2O95714 4834 aa3.66□□□□□ -1.82
USH1C-210ENST00000534556 PKHD1P08F94 4074 aa3.65□□□□□ -1.82
USH1C-210ENST00000534556 TRAV5A0A0B4J249 113 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 IGHV4-28A0A0C4DH34 117 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 A0A0J9YX75 114 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 SMCO3A2RU48 225 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 C5orf51A6NDU8 294 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 ZNF705EA8MWA4 302 aaPredicted RBP3.65□□□□□ -1.83
USH1C-210ENST00000534556 FAM25EA8MYX2 175 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 H3BTX0 84 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 AGPAT2O15120 278 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 TSC22D2O75157 780 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 DEDDO75618 318 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 IFNA21P01568 189 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 IGKV3-20P01619 116 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 CD5P06127 495 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 HLA-DRB4P13762 266 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 BMI1P35226 326 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 CMC4P56277 68 aaPredicted RBP3.65□□□□□ -1.83
USH1C-210ENST00000534556 TAS2R30P59541 319 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 NHLH2Q02577 135 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 AKR1C1Q04828 323 aa3.65□□□□□ -1.83
USH1C-210ENST00000534556 VWC2Q2TAL6 325 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms