RNA–Protein interactions for RNA: ENST00000534555.5

RPS3-220, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 387 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-220ENST00000534555 DTD1Q8TEA8 209 aa11.3□□□□□ -0.6
RPS3-220ENST00000534555 RBKSQ9H477 322 aa11.3□□□□□ -0.6
RPS3-220ENST00000534555 RPS10-NUDT3A0A1W2PQS6 291 aa11.29□□□□□ -0.6
RPS3-220ENST00000534555 FAM90A26D6RGX4 464 aa11.29□□□□□ -0.6
RPS3-220ENST00000534555 PITX3O75364 302 aa11.29□□□□□ -0.6
RPS3-220ENST00000534555 SPART-AS1P0CW21 52 aa11.29□□□□□ -0.6
RPS3-220ENST00000534555 OPRK1P41145 380 aa11.29□□□□□ -0.6
RPS3-220ENST00000534555 TNP2Q05952 138 aa11.29□□□□□ -0.6
RPS3-220ENST00000534555 C2orf83Q53S99 150 aa11.29□□□□□ -0.6
RPS3-220ENST00000534555 GGNBP1Q5YKI7 109 aa11.29□□□□□ -0.6
RPS3-220ENST00000534555 RNASEH2CQ8TDP1 164 aaKnown RBP11.29□□□□□ -0.6
RPS3-220ENST00000534555 NUDT15Q9NV35 164 aa11.29□□□□□ -0.6
RPS3-220ENST00000534555 U3KQ87 197 aa11.29□□□□□ -0.6
RPS3-220ENST00000534555 NACAE9PAV3 2078 aa11.29□□□□□ -0.6
RPS3-220ENST00000534555 TRAV6A0A075B6T7 132 aa11.28□□□□□ -0.6
RPS3-220ENST00000534555 HELTA6NFD8 242 aa11.28□□□□□ -0.6
RPS3-220ENST00000534555 SCGB2A1O75556 95 aa11.28□□□□□ -0.6
RPS3-220ENST00000534555 CDK2AP2O75956 126 aa11.28□□□□□ -0.6
RPS3-220ENST00000534555 ATP5IP56385 69 aaPredicted RBP11.28□□□□□ -0.6
RPS3-220ENST00000534555 FNDC4Q9H6D8 234 aaPredicted RBP11.28□□□□□ -0.6
RPS3-220ENST00000534555 H3BMM0 161 aa11.27□□□□□ -0.61
RPS3-220ENST00000534555 CLN5O75503 358 aa11.27□□□□□ -0.61
RPS3-220ENST00000534555 MED6O75586 246 aa11.27□□□□□ -0.61
RPS3-220ENST00000534555 ADAP1O75689 374 aa11.27□□□□□ -0.61
RPS3-220ENST00000534555 H2AFB2P0C5Z0 115 aa11.27□□□□□ -0.61
RPS3-220ENST00000534555 HTN3P15516 51 aa11.27□□□□□ -0.61
RPS3-220ENST00000534555 FXYD7P58549 80 aa11.27□□□□□ -0.61
RPS3-220ENST00000534555 TIGITQ495A1 244 aa11.27□□□□□ -0.61
RPS3-220ENST00000534555 RNF212Q495C1 297 aa11.27□□□□□ -0.61
RPS3-220ENST00000534555 ENKURQ8TC29 256 aa11.27□□□□□ -0.61
RPS3-220ENST00000534555 MITD1Q8WV92 249 aa11.27□□□□□ -0.61
RPS3-220ENST00000534555 C1QTNF4Q9BXJ3 329 aa11.27□□□□□ -0.61
RPS3-220ENST00000534555 U3KQE9 123 aa11.27□□□□□ -0.61
RPS3-220ENST00000534555 IGHV3OR16-12A0A075B7B8 117 aa11.26□□□□□ -0.61
RPS3-220ENST00000534555 SLC25A4P12235 298 aa11.26□□□□□ -0.61
RPS3-220ENST00000534555 NUTF2P61970 127 aaKnown RBP11.26□□□□□ -0.61
RPS3-220ENST00000534555 ETFRF1Q6IPR1 90 aa11.26□□□□□ -0.61
RPS3-220ENST00000534555 C16orf54Q6UWD8 224 aa11.26□□□□□ -0.61
RPS3-220ENST00000534555 ZNF705AQ6ZN79 300 aaPredicted RBP11.26□□□□□ -0.61
RPS3-220ENST00000534555 OR4X1Q8NH49 305 aa11.26□□□□□ -0.61
RPS3-220ENST00000534555 GLMPQ8WWB7 406 aa11.26□□□□□ -0.61
RPS3-220ENST00000534555 NARS2Q96I59 477 aaKnown RBP11.26□□□□□ -0.61
RPS3-220ENST00000534555 CIB3Q96Q77 187 aaPredicted RBP11.26□□□□□ -0.61
RPS3-220ENST00000534555 IGKV1-17P01599 117 aa11.25□□□□□ -0.61
RPS3-220ENST00000534555 DEFA1P59665 94 aa11.25□□□□□ -0.61
RPS3-220ENST00000534555 DEFA3P59666 94 aa11.25□□□□□ -0.61
RPS3-220ENST00000534555 DEFB1P60022 68 aa11.25□□□□□ -0.61
RPS3-220ENST00000534555 RPP30P78346 268 aaKnown RBP11.25□□□□□ -0.61
RPS3-220ENST00000534555 FAM222AQ5U5X8 452 aa11.25□□□□□ -0.61
RPS3-220ENST00000534555 TMEM170AQ8WVE7 144 aa11.25□□□□□ -0.61
RPS3-220ENST00000534555 FAM210BQ96KR6 192 aa11.25□□□□□ -0.61
RPS3-220ENST00000534555 NEU1Q99519 415 aa11.25□□□□□ -0.61
RPS3-220ENST00000534555 NIPSNAP3BQ9BS92 247 aa11.25□□□□□ -0.61
RPS3-220ENST00000534555 DKK2Q9UBU2 259 aa11.25□□□□□ -0.61
RPS3-220ENST00000534555 ZNF705FA8MVS1 300 aaPredicted RBP11.24□□□□□ -0.61
RPS3-220ENST00000534555 SYNGR2O43760 224 aa11.24□□□□□ -0.61
RPS3-220ENST00000534555 IGKV3-20P01619 116 aa11.24□□□□□ -0.61
RPS3-220ENST00000534555 ZNF705DP0CH99 300 aaPredicted RBP11.24□□□□□ -0.61
RPS3-220ENST00000534555 ZNF705BP0CI00 300 aaPredicted RBP11.24□□□□□ -0.61
RPS3-220ENST00000534555 IFITM3Q01628 133 aa11.24□□□□□ -0.61
RPS3-220ENST00000534555 GDF5OSQ5U4N7 250 aa11.24□□□□□ -0.61
RPS3-220ENST00000534555 ZNF431Q8TF32 576 aaPredicted RBP11.24□□□□□ -0.61
RPS3-220ENST00000534555 APOBP04114 4563 aaKnown RBP11.23□□□□□ -0.61
RPS3-220ENST00000534555 TRAV30A0A087WSZ9 112 aa11.23□□□□□ -0.61
RPS3-220ENST00000534555 TMEM189A5PLL7 270 aa11.23□□□□□ -0.61
RPS3-220ENST00000534555 HNRNPCP07910 306 aaKnown RBP eCLIP11.23□□□□□ -0.61
RPS3-220ENST00000534555 IAPPP10997 89 aa11.23□□□□□ -0.61
RPS3-220ENST00000534555 NKX2-1P43699 371 aaPredicted RBP11.23□□□□□ -0.61
RPS3-220ENST00000534555 EIF2B2P49770 351 aaKnown RBP11.23□□□□□ -0.61
RPS3-220ENST00000534555 RAB11AP62491 216 aa11.23□□□□□ -0.61
RPS3-220ENST00000534555 TMEM88Q6PEY1 159 aa11.23□□□□□ -0.61
RPS3-220ENST00000534555 Q8N1X5 172 aa11.23□□□□□ -0.61
RPS3-220ENST00000534555 SEC22CQ9BRL7 303 aa11.23□□□□□ -0.61
RPS3-220ENST00000534555 MAGT1Q9H0U3 335 aa11.23□□□□□ -0.61
RPS3-220ENST00000534555 SMIM9A6NGZ8 99 aa11.22□□□□□ -0.61
RPS3-220ENST00000534555 WRBO00258 174 aa11.22□□□□□ -0.61
RPS3-220ENST00000534555 HLA-DRB4P13762 266 aa11.22□□□□□ -0.61
RPS3-220ENST00000534555 RND2P52198 227 aa11.22□□□□□ -0.61
RPS3-220ENST00000534555 AP2S1P53680 142 aaPredicted RBP11.22□□□□□ -0.61
RPS3-220ENST00000534555 SNRPD3P62318 126 aaKnown RBP11.22□□□□□ -0.61
RPS3-220ENST00000534555 IAH1Q2TAA2 248 aaPredicted RBP11.22□□□□□ -0.61
RPS3-220ENST00000534555 PRSS54Q6PEW0 395 aa11.22□□□□□ -0.61
RPS3-220ENST00000534555 OR4D5Q8NGN0 318 aa11.22□□□□□ -0.61
RPS3-220ENST00000534555 SCRT2Q9NQ03 307 aa11.22□□□□□ -0.61
RPS3-220ENST00000534555 PAIP2BQ9ULR5 123 aaKnown RBP11.22□□□□□ -0.61
RPS3-220ENST00000534555 RFNGQ9Y644 331 aa11.22□□□□□ -0.61
RPS3-220ENST00000534555 HLA-DRB4X5D2U9 266 aa11.22□□□□□ -0.61
RPS3-220ENST00000534555 IL5P05113 134 aa11.21□□□□□ -0.61
RPS3-220ENST00000534555 GPX4P36969 197 aaPredicted RBP11.21□□□□□ -0.61
RPS3-220ENST00000534555 ID3Q02535 119 aa11.21□□□□□ -0.61
RPS3-220ENST00000534555 USF2Q15853 346 aaPredicted RBP11.21□□□□□ -0.61
RPS3-220ENST00000534555 NRARPQ7Z6K4 114 aa11.21□□□□□ -0.61
RPS3-220ENST00000534555 C12orf45Q8N5I9 185 aaPredicted RBP11.21□□□□□ -0.61
RPS3-220ENST00000534555 OR1S2Q8NGQ3 325 aa11.21□□□□□ -0.61
RPS3-220ENST00000534555 ACY3Q96HD9 319 aa11.21□□□□□ -0.61
RPS3-220ENST00000534555 GPN1Q9HCN4 374 aaPredicted RBP11.21□□□□□ -0.61
RPS3-220ENST00000534555 GSKIPQ9P0R6 139 aa11.21□□□□□ -0.61
RPS3-220ENST00000534555 DNAH5Q8TE73 4624 aa11.21□□□□□ -0.62
RPS3-220ENST00000534555 FAM25EA8MYX2 175 aa11.2□□□□□ -0.62
RPS3-220ENST00000534555 SSSCA1O60232 199 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms