RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 TNFRSF9Q07011 255 aa3.22□□□□□ -1.89
CASP4-213ENST00000534356 COQ5Q5HYK3 327 aa3.22□□□□□ -1.89
CASP4-213ENST00000534356 CLVS2Q5SYC1 327 aa3.22□□□□□ -1.89
CASP4-213ENST00000534356 LINC00322Q6ZN03 302 aaPredicted RBP3.22□□□□□ -1.89
CASP4-213ENST00000534356 RASSF6Q6ZTQ3 369 aa3.22□□□□□ -1.89
CASP4-213ENST00000534356 STX12Q86Y82 276 aa3.22□□□□□ -1.89
CASP4-213ENST00000534356 HS3ST5Q8IZT8 346 aa3.22□□□□□ -1.89
CASP4-213ENST00000534356 ST20-AS1Q8NBB2 130 aa3.22□□□□□ -1.89
CASP4-213ENST00000534356 OR5D18Q8NGL1 313 aa3.22□□□□□ -1.89
CASP4-213ENST00000534356 OR10AC1Q8NH08 325 aa3.22□□□□□ -1.89
CASP4-213ENST00000534356 TMEM243Q9BU79 118 aa3.22□□□□□ -1.89
CASP4-213ENST00000534356 HINT2Q9BX68 163 aa3.22□□□□□ -1.89
CASP4-213ENST00000534356 CMC2Q9NRP2 79 aa3.22□□□□□ -1.89
CASP4-213ENST00000534356 FGFR1OP2Q9NVK5 253 aa3.22□□□□□ -1.89
CASP4-213ENST00000534356 GID8Q9NWU2 228 aa3.22□□□□□ -1.89
CASP4-213ENST00000534356 MRM2Q9UI43 246 aaKnown RBP3.22□□□□□ -1.89
CASP4-213ENST00000534356 RBMX2Q9Y388 322 aaKnown RBP3.22□□□□□ -1.89
CASP4-213ENST00000534356 V9GYS6 101 aa3.22□□□□□ -1.89
CASP4-213ENST00000534356 TRGV10A0A0A0MS01 117 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 BBIP1A8MTZ0 92 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 M0QZK8 103 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 GABRPO00591 440 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 FGF16O43320 207 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 HSBP1O75506 76 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 DHRS3O75911 302 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 HPRT1P00492 218 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 TRBV12-3P01733 135 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 RAB4AP20338 218 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 BLVRBP30043 206 aaPredicted RBP3.21□□□□□ -1.9
CASP4-213ENST00000534356 SLC6A1P30531 599 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 POLR2IP36954 125 aaKnown RBP3.21□□□□□ -1.9
CASP4-213ENST00000534356 TALDO1P37837 337 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 RAB7AP51149 207 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 TAS2R46P59540 309 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 VBP1P61758 197 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 APOFQ13790 326 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 COTL1Q14019 142 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 CDK5R1Q15078 307 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 GCSAMLQ5JQS6 135 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 DEGS2Q6QHC5 323 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 DEFB125Q8N687 156 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 SPANXA2-OT1Q8N9U9 137 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 OR52L1Q8NGH7 329 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 ENKURQ8TC29 256 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 ADAT3Q96EY9 351 aaPredicted RBP3.21□□□□□ -1.9
CASP4-213ENST00000534356 TBX5Q99593 518 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 FAM103A1Q9BTL3 118 aaKnown RBP3.21□□□□□ -1.9
CASP4-213ENST00000534356 TOLLIPQ9H0E2 274 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 ABCB9Q9NP78 766 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 CLN6Q9NWW5 311 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 C21orf62Q9NYP8 219 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 IDI2-AS1Q9NZ38 188 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 OR52A1Q9UKL2 312 aa3.21□□□□□ -1.9
CASP4-213ENST00000534356 LRP1BQ9NZR2 4599 aa3.2□□□□□ -1.9
CASP4-213ENST00000534356 APOBP04114 4563 aaKnown RBP3.2□□□□□ -1.9
CASP4-213ENST00000534356 RIIAD1A6NNX1 92 aa3.2□□□□□ -1.9
CASP4-213ENST00000534356 LINC01619G3V211 115 aa3.2□□□□□ -1.9
CASP4-213ENST00000534356 IGLV1-51P01701 117 aa3.2□□□□□ -1.9
CASP4-213ENST00000534356 APOC1P02654 83 aa3.2□□□□□ -1.9
CASP4-213ENST00000534356 CD7P09564 240 aa3.2□□□□□ -1.9
CASP4-213ENST00000534356 PRKACBP22694 351 aa3.2□□□□□ -1.9
CASP4-213ENST00000534356 ERP29P30040 261 aaKnown RBP3.2□□□□□ -1.9
CASP4-213ENST00000534356 S100A12P80511 92 aa3.2□□□□□ -1.9
CASP4-213ENST00000534356 RUNX1Q01196 453 aa3.2□□□□□ -1.9
CASP4-213ENST00000534356 SPCS2Q15005 226 aa3.2□□□□□ -1.9
CASP4-213ENST00000534356 LINC00336Q6ZUF6 198 aa3.2□□□□□ -1.9
CASP4-213ENST00000534356 C10orf67Q8IYJ2 551 aa3.2□□□□□ -1.9
CASP4-213ENST00000534356 ZNF645Q8N7E2 425 aa3.2□□□□□ -1.9
CASP4-213ENST00000534356 OR4D6Q8NGJ1 314 aa3.2□□□□□ -1.9
CASP4-213ENST00000534356 BAALCQ8WXS3 180 aa3.2□□□□□ -1.9
CASP4-213ENST00000534356 UBE2E2Q96LR5 201 aa3.2□□□□□ -1.9
CASP4-213ENST00000534356 PARP11Q9NR21 331 aa3.2□□□□□ -1.9
CASP4-213ENST00000534356 FLVCR2Q9UPI3 526 aa3.2□□□□□ -1.9
CASP4-213ENST00000534356 MEIKINA0A087WXM9 373 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 TRAV41A0A0B4J266 112 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 ZNF729A6NN14 1252 aaPredicted RBP3.19□□□□□ -1.9
CASP4-213ENST00000534356 OOSP1A8MZH6 123 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 H3BN98 237 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 DEGS1O15121 323 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 MPDU1O75352 247 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 IFNGP01579 166 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 IFNA6P05013 189 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 ATF1P18846 271 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 IFNGR2P38484 337 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 HSPA13P48723 471 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 INSL3P51460 131 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 SMIM11AP58511 58 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 CXCR4P61073 352 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 GPR176Q14439 515 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 PIGYQ3MUY2 71 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 YIF1BQ5BJH7 314 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 BCL2L15Q5TBC7 163 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 ZNF322Q6U7Q0 402 aaPredicted RBP3.19□□□□□ -1.9
CASP4-213ENST00000534356 SGPP2Q8IWX5 399 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 OR51A4Q8NGJ6 313 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 OR10K1Q8NGX5 313 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 OR10X1Q8NGY0 326 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 OR2T10Q8NGZ9 312 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 LRRC20Q8TCA0 184 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 OR4C12Q96R67 309 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms