RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 C18orf65Q6ZTR6 163 aa12.27□□□□□ -0.44
TRIM3-213ENST00000533309 FAM167A-AS1Q96KT0 104 aa12.27□□□□□ -0.44
TRIM3-213ENST00000533309 RNF2Q99496 336 aa12.27□□□□□ -0.44
TRIM3-213ENST00000533309 HIGD1AQ9Y241 93 aa12.27□□□□□ -0.44
TRIM3-213ENST00000533309 RNF114Q9Y508 228 aa12.27□□□□□ -0.44
TRIM3-213ENST00000533309 TENM1Q9UKZ4 2725 aa12.27□□□□□ -0.45
TRIM3-213ENST00000533309 IGHV3OR16-8A0A075B7F1 116 aa12.26□□□□□ -0.45
TRIM3-213ENST00000533309 TRAV5A0A0B4J249 113 aa12.26□□□□□ -0.45
TRIM3-213ENST00000533309 CLPSL1A2RUU4 121 aa12.26□□□□□ -0.45
TRIM3-213ENST00000533309 I3L521 148 aa12.26□□□□□ -0.45
TRIM3-213ENST00000533309 ARL14EPLP0DKL9 152 aa12.26□□□□□ -0.45
TRIM3-213ENST00000533309 CDX1P47902 265 aaPredicted RBP12.26□□□□□ -0.45
TRIM3-213ENST00000533309 COMMD7Q86VX2 200 aa12.26□□□□□ -0.45
TRIM3-213ENST00000533309 ZNF503Q96F45 646 aa12.26□□□□□ -0.45
TRIM3-213ENST00000533309 SLC25A2Q9BXI2 301 aa12.26□□□□□ -0.45
TRIM3-213ENST00000533309 SLC25A39Q9BZJ4 359 aaPredicted RBP12.26□□□□□ -0.45
TRIM3-213ENST00000533309 PFDN2Q9UHV9 154 aa12.26□□□□□ -0.45
TRIM3-213ENST00000533309 CD28P10747 220 aa12.26□□□□□ -0.45
TRIM3-213ENST00000533309 IL34Q6ZMJ4 242 aa12.26□□□□□ -0.45
TRIM3-213ENST00000533309 SCRT1Q9BWW7 348 aa12.26□□□□□ -0.45
TRIM3-213ENST00000533309 TMPRSS5Q9H3S3 457 aa12.26□□□□□ -0.45
TRIM3-213ENST00000533309 H3BRN7 92 aa12.25□□□□□ -0.45
TRIM3-213ENST00000533309 NDUFA4O00483 81 aa12.25□□□□□ -0.45
TRIM3-213ENST00000533309 GGCTO75223 188 aaKnown RBP12.25□□□□□ -0.45
TRIM3-213ENST00000533309 C8orf88P0DMB2 117 aa12.25□□□□□ -0.45
TRIM3-213ENST00000533309 MARC2Q969Z3 335 aa12.25□□□□□ -0.45
TRIM3-213ENST00000533309 SHANK2-AS3Q9BTD1 123 aa12.25□□□□□ -0.45
TRIM3-213ENST00000533309 TECRQ9NZ01 308 aaKnown RBP12.25□□□□□ -0.45
TRIM3-213ENST00000533309 IGHV4OR15-8A0A075B7B6 117 aa12.24□□□□□ -0.45
TRIM3-213ENST00000533309 A0A087WW49 117 aa12.24□□□□□ -0.45
TRIM3-213ENST00000533309 HAX1O00165 279 aa12.24□□□□□ -0.45
TRIM3-213ENST00000533309 CXorf1O96002 111 aa12.24□□□□□ -0.45
TRIM3-213ENST00000533309 LEMD1Q68G75 181 aa12.24□□□□□ -0.45
TRIM3-213ENST00000533309 UNQ9165/PRO28630Q6UXU0 137 aa12.24□□□□□ -0.45
TRIM3-213ENST00000533309 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.24□□□□□ -0.45
TRIM3-213ENST00000533309 C11orf44Q8N8P7 122 aa12.24□□□□□ -0.45
TRIM3-213ENST00000533309 C4orf3Q8WVX3 66 aa12.24□□□□□ -0.45
TRIM3-213ENST00000533309 NUDT19A8MXV4 375 aa12.23□□□□□ -0.45
TRIM3-213ENST00000533309 TAS2R45P59539 299 aa12.23□□□□□ -0.45
TRIM3-213ENST00000533309 KHDC3LQ587J8 217 aa12.23□□□□□ -0.45
TRIM3-213ENST00000533309 KHDC1LQ5JSQ8 128 aa12.23□□□□□ -0.45
TRIM3-213ENST00000533309 FAM210AQ96ND0 272 aa12.23□□□□□ -0.45
TRIM3-213ENST00000533309 GCHFRP30047 84 aa12.22□□□□□ -0.45
TRIM3-213ENST00000533309 PMS2P11Q13670 270 aa12.22□□□□□ -0.45
TRIM3-213ENST00000533309 DEFB136Q30KP8 78 aa12.22□□□□□ -0.45
TRIM3-213ENST00000533309 PQLC2Q6ZP29 291 aa12.22□□□□□ -0.45
TRIM3-213ENST00000533309 WFDC12Q8WWY7 111 aa12.22□□□□□ -0.45
TRIM3-213ENST00000533309 TMEM190Q8WZ59 177 aa12.22□□□□□ -0.45
TRIM3-213ENST00000533309 CITED2Q99967 270 aaPredicted RBP12.22□□□□□ -0.45
TRIM3-213ENST00000533309 RABAC1Q9UI14 185 aa12.22□□□□□ -0.45
TRIM3-213ENST00000533309 WNK1Q9H4A3 2382 aa12.22□□□□□ -0.45
TRIM3-213ENST00000533309 RAB19A4D1S5 217 aa12.22□□□□□ -0.45
TRIM3-213ENST00000533309 ZNF98A6NK75 572 aa12.22□□□□□ -0.45
TRIM3-213ENST00000533309 OR7C2O60412 319 aa12.22□□□□□ -0.45
TRIM3-213ENST00000533309 PYYP10082 97 aa12.22□□□□□ -0.45
TRIM3-213ENST00000533309 GP9P14770 177 aa12.22□□□□□ -0.45
TRIM3-213ENST00000533309 KRTAP10-3P60369 221 aa12.22□□□□□ -0.45
TRIM3-213ENST00000533309 SRSF3P84103 164 aaKnown RBP12.22□□□□□ -0.45
TRIM3-213ENST00000533309 GPHB5Q86YW7 130 aa12.22□□□□□ -0.45
TRIM3-213ENST00000533309 IQCF2Q8IXL9 164 aa12.22□□□□□ -0.45
TRIM3-213ENST00000533309 EIF4E3Q8N5X7 224 aaKnown RBP12.22□□□□□ -0.45
TRIM3-213ENST00000533309 KLHL30-AS1Q8NEE0 82 aa12.22□□□□□ -0.45
TRIM3-213ENST00000533309 C20orf24Q9BUV8 137 aa12.22□□□□□ -0.45
TRIM3-213ENST00000533309 GNG13Q9P2W3 67 aa12.22□□□□□ -0.45
TRIM3-213ENST00000533309 ZNF207O43670 478 aaKnown RBP12.21□□□□□ -0.46
TRIM3-213ENST00000533309 HSPB1P04792 205 aaKnown RBP12.21□□□□□ -0.46
TRIM3-213ENST00000533309 PSMB3P49720 205 aa12.21□□□□□ -0.46
TRIM3-213ENST00000533309 TOR2AQ5JU69 321 aa12.21□□□□□ -0.46
TRIM3-213ENST00000533309 U3KQE9 123 aa12.21□□□□□ -0.46
TRIM3-213ENST00000533309 A0A1B0GUS0 222 aa12.2□□□□□ -0.46
TRIM3-213ENST00000533309 MRPS12O15235 138 aaKnown RBP12.2□□□□□ -0.46
TRIM3-213ENST00000533309 OR10J4P0C629 311 aa12.2□□□□□ -0.46
TRIM3-213ENST00000533309 CRYBB3P26998 211 aa12.2□□□□□ -0.46
TRIM3-213ENST00000533309 HOXD3P31249 432 aaPredicted RBP12.2□□□□□ -0.46
TRIM3-213ENST00000533309 GUK1Q16774 197 aa12.2□□□□□ -0.46
TRIM3-213ENST00000533309 HAGHQ16775 308 aa12.2□□□□□ -0.46
TRIM3-213ENST00000533309 RPEL1Q2QD12 228 aa12.2□□□□□ -0.46
TRIM3-213ENST00000533309 SUN5Q8TC36 379 aa12.2□□□□□ -0.46
TRIM3-213ENST00000533309 FXYD5Q96DB9 178 aa12.2□□□□□ -0.46
TRIM3-213ENST00000533309 RARRES2Q99969 163 aa12.2□□□□□ -0.46
TRIM3-213ENST00000533309 RBFOX3A6NFN3 312 aa12.19□□□□□ -0.46
TRIM3-213ENST00000533309 BUB3O43684 328 aa12.19□□□□□ -0.46
TRIM3-213ENST00000533309 APOHP02749 345 aaPredicted RBP12.19□□□□□ -0.46
TRIM3-213ENST00000533309 BCL2P10415 239 aa12.19□□□□□ -0.46
TRIM3-213ENST00000533309 C8orf86Q6ZUL3 223 aa12.19□□□□□ -0.46
TRIM3-213ENST00000533309 CITED4Q96RK1 184 aa12.19□□□□□ -0.46
TRIM3-213ENST00000533309 METTL26Q96S19 204 aa12.19□□□□□ -0.46
TRIM3-213ENST00000533309 PAXXQ9BUH6 204 aa12.19□□□□□ -0.46
TRIM3-213ENST00000533309 OR51M1Q9H341 326 aa12.19□□□□□ -0.46
TRIM3-213ENST00000533309 TMEM231Q9H6L2 316 aa12.19□□□□□ -0.46
TRIM3-213ENST00000533309 TSSC4Q9Y5U2 329 aaPredicted RBP12.19□□□□□ -0.46
TRIM3-213ENST00000533309 LOC102723971A0A1B0GUV8 181 aa12.19□□□□□ -0.46
TRIM3-213ENST00000533309 ADARB2-AS1A8MUL3 147 aa12.19□□□□□ -0.46
TRIM3-213ENST00000533309 CD5P06127 495 aa12.19□□□□□ -0.46
TRIM3-213ENST00000533309 UBE2L3P68036 154 aaKnown RBP12.19□□□□□ -0.46
TRIM3-213ENST00000533309 ICAM4Q14773 271 aa12.19□□□□□ -0.46
TRIM3-213ENST00000533309 FAM106AQ4KMX7 169 aa12.19□□□□□ -0.46
TRIM3-213ENST00000533309 ZNF506Q5JVG8 444 aa12.19□□□□□ -0.46
TRIM3-213ENST00000533309 S100A7AQ86SG5 101 aa12.19□□□□□ -0.46
TRIM3-213ENST00000533309 STXBP6Q8NFX7 210 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms