RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 A0A1W2PPV4 95 aa10.97□□□□□ -0.65
TRIM3-212ENST00000533064 A0A1W2PRX2 142 aa10.97□□□□□ -0.65
TRIM3-212ENST00000533064 RBFOX3A6NFN3 312 aa10.97□□□□□ -0.65
TRIM3-212ENST00000533064 TRBV12-3P01733 135 aa10.97□□□□□ -0.65
TRIM3-212ENST00000533064 HSPB1P04792 205 aaKnown RBP10.97□□□□□ -0.65
TRIM3-212ENST00000533064 PSG1P11464 419 aa10.97□□□□□ -0.65
TRIM3-212ENST00000533064 GATA2P23769 480 aaPredicted RBP10.97□□□□□ -0.65
TRIM3-212ENST00000533064 ADMP35318 185 aa10.97□□□□□ -0.65
TRIM3-212ENST00000533064 FGF8P55075 233 aaPredicted RBP10.97□□□□□ -0.65
TRIM3-212ENST00000533064 PMS2P11Q13670 270 aa10.97□□□□□ -0.65
TRIM3-212ENST00000533064 RPEL1Q2QD12 228 aa10.97□□□□□ -0.65
TRIM3-212ENST00000533064 GCSAMLQ5JQS6 135 aa10.97□□□□□ -0.65
TRIM3-212ENST00000533064 DPF1Q92782 380 aa10.96□□□□□ -0.65
TRIM3-212ENST00000533064 TENM1Q9UKZ4 2725 aa10.96□□□□□ -0.66
TRIM3-212ENST00000533064 IGHV3-35A0A0C4DH35 117 aa10.95□□□□□ -0.66
TRIM3-212ENST00000533064 C9JQL5 133 aa10.95□□□□□ -0.66
TRIM3-212ENST00000533064 BMPR1BO00238 502 aa10.95□□□□□ -0.66
TRIM3-212ENST00000533064 LYZP61626 148 aa10.95□□□□□ -0.66
TRIM3-212ENST00000533064 RHOBP62745 196 aa10.95□□□□□ -0.66
TRIM3-212ENST00000533064 FAM106AQ4KMX7 169 aa10.95□□□□□ -0.66
TRIM3-212ENST00000533064 ZNF506Q5JVG8 444 aa10.95□□□□□ -0.66
TRIM3-212ENST00000533064 C10orf91Q5T1B1 145 aa10.95□□□□□ -0.66
TRIM3-212ENST00000533064 PFDN5Q99471 154 aa10.95□□□□□ -0.66
TRIM3-212ENST00000533064 SEC11CQ9BY50 192 aa10.95□□□□□ -0.66
TRIM3-212ENST00000533064 PUS1Q9Y606 427 aaKnown RBP eCLIP10.95□□□□□ -0.66
TRIM3-212ENST00000533064 NDUFA4O00483 81 aa10.95□□□□□ -0.66
TRIM3-212ENST00000533064 HMGB3O15347 200 aaKnown RBP10.95□□□□□ -0.66
TRIM3-212ENST00000533064 OR2C1O95371 312 aa10.95□□□□□ -0.66
TRIM3-212ENST00000533064 IFNA1P01562 189 aa10.95□□□□□ -0.66
TRIM3-212ENST00000533064 IL4P05112 153 aa10.95□□□□□ -0.66
TRIM3-212ENST00000533064 SFTA3P0C7M3 94 aa10.95□□□□□ -0.66
TRIM3-212ENST00000533064 HAGHQ16775 308 aa10.95□□□□□ -0.66
TRIM3-212ENST00000533064 KHDC3LQ587J8 217 aa10.95□□□□□ -0.66
TRIM3-212ENST00000533064 C18orf65Q6ZTR6 163 aa10.95□□□□□ -0.66
TRIM3-212ENST00000533064 C8orf86Q6ZUL3 223 aa10.95□□□□□ -0.66
TRIM3-212ENST00000533064 S100A7AQ86SG5 101 aa10.95□□□□□ -0.66
TRIM3-212ENST00000533064 NDUFA11Q86Y39 141 aa10.95□□□□□ -0.66
TRIM3-212ENST00000533064 CCDC28AQ8IWP9 274 aa10.95□□□□□ -0.66
TRIM3-212ENST00000533064 OR11H1Q8NG94 326 aa10.95□□□□□ -0.66
TRIM3-212ENST00000533064 OR1L4Q8NGR5 311 aa10.95□□□□□ -0.66
TRIM3-212ENST00000533064 RNF125Q96EQ8 232 aa10.95□□□□□ -0.66
TRIM3-212ENST00000533064 RARRES2Q99969 163 aa10.95□□□□□ -0.66
TRIM3-212ENST00000533064 GNG13Q9P2W3 67 aa10.95□□□□□ -0.66
TRIM3-212ENST00000533064 IGHV4OR15-8A0A075B7B6 117 aa10.94□□□□□ -0.66
TRIM3-212ENST00000533064 A0A087WW49 117 aa10.94□□□□□ -0.66
TRIM3-212ENST00000533064 LOC102723971A0A1B0GUV8 181 aa10.94□□□□□ -0.66
TRIM3-212ENST00000533064 F8W036 122 aa10.94□□□□□ -0.66
TRIM3-212ENST00000533064 LINC01619G3V211 115 aa10.94□□□□□ -0.66
TRIM3-212ENST00000533064 COX7A2P2O60397 106 aa10.94□□□□□ -0.66
TRIM3-212ENST00000533064 OR5G3P0C626 314 aa10.94□□□□□ -0.66
TRIM3-212ENST00000533064 ORM2P19652 201 aa10.94□□□□□ -0.66
TRIM3-212ENST00000533064 S100A7P31151 101 aa10.94□□□□□ -0.66
TRIM3-212ENST00000533064 DEFB136Q30KP8 78 aa10.94□□□□□ -0.66
TRIM3-212ENST00000533064 NSUN5P1Q3KNT7 163 aa10.94□□□□□ -0.66
TRIM3-212ENST00000533064 HIST2H2BDQ6DRA6 164 aa10.94□□□□□ -0.66
TRIM3-212ENST00000533064 LURAP1LQ8IV03 231 aa10.94□□□□□ -0.66
TRIM3-212ENST00000533064 OR1B1Q8NGR6 318 aa10.94□□□□□ -0.66
TRIM3-212ENST00000533064 OR1N2Q8NGR9 330 aa10.94□□□□□ -0.66
TRIM3-212ENST00000533064 CARHSP1Q9Y2V2 147 aaKnown RBP10.94□□□□□ -0.66
TRIM3-212ENST00000533064 FBN1P35555 2871 aaKnown RBP10.93□□□□□ -0.66
TRIM3-212ENST00000533064 ELOA3CA0A087WX78 387 aaPredicted RBP10.93□□□□□ -0.66
TRIM3-212ENST00000533064 HYPMO75409 117 aa10.93□□□□□ -0.66
TRIM3-212ENST00000533064 EIF3GO75821 320 aaKnown RBP eCLIP10.93□□□□□ -0.66
TRIM3-212ENST00000533064 APOC3P02656 99 aa10.93□□□□□ -0.66
TRIM3-212ENST00000533064 STAG3L2P0CL84 134 aa10.93□□□□□ -0.66
TRIM3-212ENST00000533064 STAG3L3P0CL85 134 aa10.93□□□□□ -0.66
TRIM3-212ENST00000533064 BCL2P10415 239 aa10.93□□□□□ -0.66
TRIM3-212ENST00000533064 ADCYAP1P18509 176 aa10.93□□□□□ -0.66
TRIM3-212ENST00000533064 TAGLN2P37802 199 aaKnown RBP10.93□□□□□ -0.66
TRIM3-212ENST00000533064 PPT1P50897 306 aa10.93□□□□□ -0.66
TRIM3-212ENST00000533064 KRTAP10-3P60369 221 aa10.93□□□□□ -0.66
TRIM3-212ENST00000533064 ICAM4Q14773 271 aa10.93□□□□□ -0.66
TRIM3-212ENST00000533064 TOMM20LQ6UXN7 152 aa10.93□□□□□ -0.66
TRIM3-212ENST00000533064 SLC35B3Q9H1N7 401 aa10.93□□□□□ -0.66
TRIM3-212ENST00000533064 DNAJC4Q9NNZ3 241 aa10.93□□□□□ -0.66
TRIM3-212ENST00000533064 DOK5Q9P104 306 aa10.93□□□□□ -0.66
TRIM3-212ENST00000533064 COL6A5A8TX70 2615 aa10.93□□□□□ -0.66
TRIM3-212ENST00000533064 WI2-2373I1.2A0A1W2PRP0 233 aa10.92□□□□□ -0.66
TRIM3-212ENST00000533064 ZNF320A2RRD8 509 aa10.92□□□□□ -0.66
TRIM3-212ENST00000533064 PSMB3P49720 205 aa10.92□□□□□ -0.66
TRIM3-212ENST00000533064 PLP1P60201 277 aa10.92□□□□□ -0.66
TRIM3-212ENST00000533064 C10orf113Q5VZT2 155 aa10.92□□□□□ -0.66
TRIM3-212ENST00000533064 GPHB5Q86YW7 130 aa10.92□□□□□ -0.66
TRIM3-212ENST00000533064 GATAD1Q8WUU5 269 aa10.92□□□□□ -0.66
TRIM3-212ENST00000533064 RNF2Q99496 336 aa10.92□□□□□ -0.66
TRIM3-212ENST00000533064 C20orf24Q9BUV8 137 aa10.92□□□□□ -0.66
TRIM3-212ENST00000533064 SEPSECSQ9HD40 501 aaKnown RBP10.92□□□□□ -0.66
TRIM3-212ENST00000533064 MANBALQ9NQG1 85 aa10.92□□□□□ -0.66
TRIM3-212ENST00000533064 FUT9Q9Y231 359 aa10.92□□□□□ -0.66
TRIM3-212ENST00000533064 HIGD1AQ9Y241 93 aa10.92□□□□□ -0.66
TRIM3-212ENST00000533064 CXorf1O96002 111 aa10.92□□□□□ -0.66
TRIM3-212ENST00000533064 HOXD3P31249 432 aaPredicted RBP10.92□□□□□ -0.66
TRIM3-212ENST00000533064 SMUG1Q53HV7 270 aa10.92□□□□□ -0.66
TRIM3-212ENST00000533064 FAM78BQ5VT40 261 aa10.92□□□□□ -0.66
TRIM3-212ENST00000533064 C12orf54Q6X4T0 127 aa10.92□□□□□ -0.66
TRIM3-212ENST00000533064 RXFP4Q8TDU9 374 aa10.92□□□□□ -0.66
TRIM3-212ENST00000533064 CITED1Q99966 193 aa10.92□□□□□ -0.66
TRIM3-212ENST00000533064 TMPRSS5Q9H3S3 457 aa10.92□□□□□ -0.66
TRIM3-212ENST00000533064 RABAC1Q9UI14 185 aa10.92□□□□□ -0.66
TRIM3-212ENST00000533064 VAX2Q9UIW0 290 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms