RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 HGFACQ04756 655 aa8.79□□□□□ -1
COLCA1-203ENST00000532918 CHCHD5Q9BSY4 110 aa8.79□□□□□ -1
COLCA1-203ENST00000532918 TOMM7Q9P0U1 55 aa8.79□□□□□ -1
COLCA1-203ENST00000532918 A0A1W2PRE2 83 aa8.79□□□□□ -1
COLCA1-203ENST00000532918 RPL35AP18077 110 aaKnown RBP8.79□□□□□ -1
COLCA1-203ENST00000532918 GATA2P23769 480 aaPredicted RBP8.79□□□□□ -1
COLCA1-203ENST00000532918 SCN2AQ99250 2005 aa8.79□□□□□ -1
COLCA1-203ENST00000532918 ACACAQ13085 2346 aa8.79□□□□□ -1
COLCA1-203ENST00000532918 TRAV9-1A0A075B6T8 112 aa8.78□□□□□ -1
COLCA1-203ENST00000532918 TRAV5A0A0B4J249 113 aa8.78□□□□□ -1
COLCA1-203ENST00000532918 IGKV1-12A0A0C4DH73 117 aa8.78□□□□□ -1
COLCA1-203ENST00000532918 IGKV1D-12P01611 117 aa8.78□□□□□ -1
COLCA1-203ENST00000532918 PLA2G5P39877 138 aa8.78□□□□□ -1
COLCA1-203ENST00000532918 C9orf153Q5TBE3 101 aa8.78□□□□□ -1
COLCA1-203ENST00000532918 RCHY1Q96PM5 261 aa8.78□□□□□ -1
COLCA1-203ENST00000532918 NRN1Q9NPD7 142 aa8.78□□□□□ -1
COLCA1-203ENST00000532918 EPDR1Q9UM22 224 aa8.78□□□□□ -1
COLCA1-203ENST00000532918 TNFRSF6BO95407 300 aa8.78□□□□□ -1
COLCA1-203ENST00000532918 GATA4P43694 442 aa8.78□□□□□ -1
COLCA1-203ENST00000532918 PHLDA1Q8WV24 401 aaPredicted RBP8.78□□□□□ -1
COLCA1-203ENST00000532918 IL36BQ9NZH7 164 aa8.78□□□□□ -1
COLCA1-203ENST00000532918 PSG8Q9UQ74 426 aa8.78□□□□□ -1
COLCA1-203ENST00000532918 GGTLC3B5MD39 225 aa8.78□□□□□ -1
COLCA1-203ENST00000532918 SPINK8P0C7L1 97 aa8.78□□□□□ -1
COLCA1-203ENST00000532918 LYPD2Q6UXB3 125 aa8.78□□□□□ -1
COLCA1-203ENST00000532918 TRGV9Q99603 122 aa8.78□□□□□ -1
COLCA1-203ENST00000532918 GVINP1Q7Z2Y8 2422 aa8.78□□□□□ -1
COLCA1-203ENST00000532918 F2Z2F3 143 aa8.78□□□□□ -1
COLCA1-203ENST00000532918 MPZP25189 248 aa8.78□□□□□ -1
COLCA1-203ENST00000532918 ORMDL3Q8N138 153 aa8.78□□□□□ -1
COLCA1-203ENST00000532918 DAZ1Q9NQZ3 744 aaKnown RBP8.78□□□□□ -1
COLCA1-203ENST00000532918 NYNRINQ9P2P1 1898 aaKnown RBP8.78□□□□□ -1
COLCA1-203ENST00000532918 RALGAPA1Q6GYQ0 2036 aa8.77□□□□□ -1
COLCA1-203ENST00000532918 ITGB1BP1O14713 200 aa8.77□□□□□ -1
COLCA1-203ENST00000532918 LAIR2Q6ISS4 152 aa8.77□□□□□ -1
COLCA1-203ENST00000532918 LINC00477Q96M19 166 aa8.77□□□□□ -1
COLCA1-203ENST00000532918 SIGLEC9Q9Y336 463 aa8.77□□□□□ -1
COLCA1-203ENST00000532918 IGKV1D-17A0A075B6S4 117 aa8.77□□□□□ -1.01
COLCA1-203ENST00000532918 A0A087WWC5 75 aa8.77□□□□□ -1.01
COLCA1-203ENST00000532918 LY6HO94772 140 aa8.77□□□□□ -1.01
COLCA1-203ENST00000532918 HSD52Q0P140 79 aa8.77□□□□□ -1.01
COLCA1-203ENST00000532918 S100A7L2Q5SY68 101 aa8.77□□□□□ -1.01
COLCA1-203ENST00000532918 BOD1L2Q8IYS8 172 aa8.77□□□□□ -1.01
COLCA1-203ENST00000532918 ZNF329Q86UD4 541 aa8.77□□□□□ -1.01
COLCA1-203ENST00000532918 PNRC2Q9NPJ4 139 aaKnown RBP8.77□□□□□ -1.01
COLCA1-203ENST00000532918 ZSWIM8A7E2V4 1837 aa8.77□□□□□ -1.01
COLCA1-203ENST00000532918 ADARB2-AS1A8MUL3 147 aa8.76□□□□□ -1.01
COLCA1-203ENST00000532918 CFHR2P36980 270 aa8.76□□□□□ -1.01
COLCA1-203ENST00000532918 RPL36AP83881 106 aaKnown RBP8.76□□□□□ -1.01
COLCA1-203ENST00000532918 FAM19A2Q8N3H0 131 aa8.76□□□□□ -1.01
COLCA1-203ENST00000532918 RPL36ALQ969Q0 106 aaKnown RBP8.76□□□□□ -1.01
COLCA1-203ENST00000532918 SLC25A2Q9BXI2 301 aa8.76□□□□□ -1.01
COLCA1-203ENST00000532918 LGALS1P09382 135 aaKnown RBP8.76□□□□□ -1.01
COLCA1-203ENST00000532918 IMMP2LQ96T52 175 aa8.76□□□□□ -1.01
COLCA1-203ENST00000532918 A8MXK9 166 aa8.76□□□□□ -1.01
COLCA1-203ENST00000532918 J3QRE1 110 aa8.76□□□□□ -1.01
COLCA1-203ENST00000532918 PPBPP02775 128 aa8.76□□□□□ -1.01
COLCA1-203ENST00000532918 APOC4P55056 127 aa8.76□□□□□ -1.01
COLCA1-203ENST00000532918 DEFB113Q30KQ7 82 aa8.76□□□□□ -1.01
COLCA1-203ENST00000532918 ACTL10Q5JWF8 245 aa8.76□□□□□ -1.01
COLCA1-203ENST00000532918 MS4A6AQ9H2W1 248 aa8.76□□□□□ -1.01
COLCA1-203ENST00000532918 SCO2A0A1W2PP80 73 aa8.76□□□□□ -1.01
COLCA1-203ENST00000532918 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.76□□□□□ -1.01
COLCA1-203ENST00000532918 SHISA3A0PJX4 238 aa8.76□□□□□ -1.01
COLCA1-203ENST00000532918 NDUFA3O95167 84 aa8.76□□□□□ -1.01
COLCA1-203ENST00000532918 EFNB1P98172 346 aa8.76□□□□□ -1.01
COLCA1-203ENST00000532918 RUSC1-AS1Q66K80 236 aa8.76□□□□□ -1.01
COLCA1-203ENST00000532918 ZMAT4Q9H898 229 aa8.76□□□□□ -1.01
COLCA1-203ENST00000532918 TCF20Q9UGU0 1960 aaKnown RBP8.75□□□□□ -1.01
COLCA1-203ENST00000532918 EREGO14944 169 aa8.75□□□□□ -1.01
COLCA1-203ENST00000532918 SERF1AO75920 110 aa8.75□□□□□ -1.01
COLCA1-203ENST00000532918 Q6P435 159 aa8.75□□□□□ -1.01
COLCA1-203ENST00000532918 SLX1AQ9BQ83 275 aa8.75□□□□□ -1.01
COLCA1-203ENST00000532918 RHPN1-AS1Q9BWJ2 59 aa8.75□□□□□ -1.01
COLCA1-203ENST00000532918 ETV2O00321 342 aaPredicted RBP8.75□□□□□ -1.01
COLCA1-203ENST00000532918 UBE2CO00762 179 aa8.75□□□□□ -1.01
COLCA1-203ENST00000532918 MAPK1IP1LQ8NDC0 245 aa8.75□□□□□ -1.01
COLCA1-203ENST00000532918 FAM110DQ8TAY7 271 aaPredicted RBP8.75□□□□□ -1.01
COLCA1-203ENST00000532918 WDR83OSQ9Y284 106 aa8.75□□□□□ -1.01
COLCA1-203ENST00000532918 RTTNQ86VV8 2226 aa8.75□□□□□ -1.01
COLCA1-203ENST00000532918 TRGV1A0A0A0MS02 117 aa8.75□□□□□ -1.01
COLCA1-203ENST00000532918 IZUMO1RA6ND01 250 aa8.75□□□□□ -1.01
COLCA1-203ENST00000532918 CD55P08174 381 aa8.75□□□□□ -1.01
COLCA1-203ENST00000532918 VPREB1P12018 145 aa8.75□□□□□ -1.01
COLCA1-203ENST00000532918 CCL20P78556 96 aa8.75□□□□□ -1.01
COLCA1-203ENST00000532918 ID3Q02535 119 aa8.75□□□□□ -1.01
COLCA1-203ENST00000532918 UBE2V1Q13404 147 aa8.75□□□□□ -1.01
COLCA1-203ENST00000532918 IGKV1-27A0A075B6S5 117 aa8.75□□□□□ -1.01
COLCA1-203ENST00000532918 NAPSAO96009 420 aa8.75□□□□□ -1.01
COLCA1-203ENST00000532918 TMEM170AQ8WVE7 144 aa8.75□□□□□ -1.01
COLCA1-203ENST00000532918 ZNF318Q5VUA4 2279 aa8.74□□□□□ -1.01
COLCA1-203ENST00000532918 A0A1B0GUS0 222 aa8.74□□□□□ -1.01
COLCA1-203ENST00000532918 PSG1P11464 419 aa8.74□□□□□ -1.01
COLCA1-203ENST00000532918 DMRTC2Q8IXT2 367 aaPredicted RBP8.74□□□□□ -1.01
COLCA1-203ENST00000532918 PLNP26678 52 aa8.74□□□□□ -1.01
COLCA1-203ENST00000532918 RPRMLQ8N4K4 120 aa8.74□□□□□ -1.01
COLCA1-203ENST00000532918 RIF1Q5UIP0 2472 aaKnown RBP8.74□□□□□ -1.01
COLCA1-203ENST00000532918 ORMDL2Q53FV1 153 aa8.74□□□□□ -1.01
COLCA1-203ENST00000532918 ERG28Q9UKR5 140 aa8.74□□□□□ -1.01
COLCA1-203ENST00000532918 CACNA1IQ9P0X4 2223 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms