RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 SLC45A2Q9UMX9 530 aa12.56□□□□□ -0.4
PHRF1-204ENST00000532550 RYR2Q92736 4967 aa12.56□□□□□ -0.4
PHRF1-204ENST00000532550 TRAV6A0A075B6T7 132 aa12.55□□□□□ -0.4
PHRF1-204ENST00000532550 DEFB4AO15263 64 aa12.55□□□□□ -0.4
PHRF1-204ENST00000532550 GATA2P23769 480 aaPredicted RBP12.55□□□□□ -0.4
PHRF1-204ENST00000532550 PHLDA1Q8WV24 401 aaPredicted RBP12.55□□□□□ -0.4
PHRF1-204ENST00000532550 DNAH1Q9P2D7 4330 aa12.55□□□□□ -0.4
PHRF1-204ENST00000532550 H3BMM0 161 aa12.54□□□□□ -0.4
PHRF1-204ENST00000532550 IL5P05113 134 aa12.54□□□□□ -0.4
PHRF1-204ENST00000532550 C4BPBP20851 252 aa12.54□□□□□ -0.4
PHRF1-204ENST00000532550 GALR1P47211 349 aa12.54□□□□□ -0.4
PHRF1-204ENST00000532550 PAX9P55771 341 aa12.54□□□□□ -0.4
PHRF1-204ENST00000532550 TAS2R30P59541 319 aa12.54□□□□□ -0.4
PHRF1-204ENST00000532550 ZNF846Q147U1 533 aa12.54□□□□□ -0.4
PHRF1-204ENST00000532550 TMEM182Q6ZP80 229 aaPredicted RBP12.54□□□□□ -0.4
PHRF1-204ENST00000532550 LINC00299Q6ZSB3 139 aa12.54□□□□□ -0.4
PHRF1-204ENST00000532550 OR10P1Q8NGE3 313 aa12.54□□□□□ -0.4
PHRF1-204ENST00000532550 OR1B1Q8NGR6 318 aa12.54□□□□□ -0.4
PHRF1-204ENST00000532550 TMEM147Q9BVK8 224 aa12.54□□□□□ -0.4
PHRF1-204ENST00000532550 C1QTNF4Q9BXJ3 329 aa12.54□□□□□ -0.4
PHRF1-204ENST00000532550 WDR12Q9GZL7 423 aaKnown RBP12.54□□□□□ -0.4
PHRF1-204ENST00000532550 SLC25A22Q9H936 323 aa12.54□□□□□ -0.4
PHRF1-204ENST00000532550 CLEC5AQ9NY25 188 aa12.54□□□□□ -0.4
PHRF1-204ENST00000532550 PLECQ15149 4684 aaKnown RBP12.53□□□□□ -0.4
PHRF1-204ENST00000532550 ZNF98A6NK75 572 aa12.53□□□□□ -0.4
PHRF1-204ENST00000532550 PMS2P5A8MQ11 134 aa12.53□□□□□ -0.4
PHRF1-204ENST00000532550 METTL15P1P0C7V9 234 aa12.53□□□□□ -0.4
PHRF1-204ENST00000532550 MIFP14174 115 aa12.53□□□□□ -0.4
PHRF1-204ENST00000532550 PSMB3P49720 205 aa12.53□□□□□ -0.4
PHRF1-204ENST00000532550 NANOS2P60321 138 aaKnown RBP12.53□□□□□ -0.4
PHRF1-204ENST00000532550 RRAS2P62070 204 aaPredicted RBP12.53□□□□□ -0.4
PHRF1-204ENST00000532550 SAMD13Q5VXD3 122 aa12.53□□□□□ -0.4
PHRF1-204ENST00000532550 TMEM14EPQ6UXP3 125 aa12.53□□□□□ -0.4
PHRF1-204ENST00000532550 CYP2G1PQ6ZSU1 146 aa12.53□□□□□ -0.4
PHRF1-204ENST00000532550 S100ZQ8WXG8 99 aa12.53□□□□□ -0.4
PHRF1-204ENST00000532550 NPVFQ9HCQ7 196 aa12.53□□□□□ -0.4
PHRF1-204ENST00000532550 TBC1D24Q9ULP9 559 aa12.53□□□□□ -0.4
PHRF1-204ENST00000532550 FAM240BA0A1B0GVZ2 78 aa12.52□□□□□ -0.41
PHRF1-204ENST00000532550 FAM25EA8MYX2 175 aa12.52□□□□□ -0.41
PHRF1-204ENST00000532550 ISLRO14498 428 aa12.52□□□□□ -0.41
PHRF1-204ENST00000532550 TSC22D2O75157 780 aa12.52□□□□□ -0.41
PHRF1-204ENST00000532550 H2AFB2P0C5Z0 115 aa12.52□□□□□ -0.41
PHRF1-204ENST00000532550 HLA-DRB4P13762 266 aa12.52□□□□□ -0.41
PHRF1-204ENST00000532550 MEOX2P50222 304 aa12.52□□□□□ -0.41
PHRF1-204ENST00000532550 DLK1P80370 383 aa12.52□□□□□ -0.41
PHRF1-204ENST00000532550 CSNK1G2-AS1Q8NCQ2 148 aa12.52□□□□□ -0.41
PHRF1-204ENST00000532550 ZNF431Q8TF32 576 aaPredicted RBP12.52□□□□□ -0.41
PHRF1-204ENST00000532550 C16orf92Q96LL3 132 aa12.52□□□□□ -0.41
PHRF1-204ENST00000532550 GPR82Q96P67 336 aa12.52□□□□□ -0.41
PHRF1-204ENST00000532550 RSG1Q9BU20 258 aa12.52□□□□□ -0.41
PHRF1-204ENST00000532550 NUDT15Q9NV35 164 aa12.52□□□□□ -0.41
PHRF1-204ENST00000532550 XCL2Q9UBD3 114 aa12.52□□□□□ -0.41
PHRF1-204ENST00000532550 MGAT4CQ9UBM8 478 aa12.52□□□□□ -0.41
PHRF1-204ENST00000532550 HLA-DRB4X5D2U9 266 aa12.52□□□□□ -0.41
PHRF1-204ENST00000532550 C5orf51A6NDU8 294 aa12.51□□□□□ -0.41
PHRF1-204ENST00000532550 ZNF705EA8MWA4 302 aaPredicted RBP12.51□□□□□ -0.41
PHRF1-204ENST00000532550 L7N2F9 121 aa12.51□□□□□ -0.41
PHRF1-204ENST00000532550 CCSO14618 274 aa12.51□□□□□ -0.41
PHRF1-204ENST00000532550 CCNKO75909 580 aa12.51□□□□□ -0.41
PHRF1-204ENST00000532550 MBPP02686 304 aaPredicted RBP12.51□□□□□ -0.41
PHRF1-204ENST00000532550 RAP2BP61225 183 aa12.51□□□□□ -0.41
PHRF1-204ENST00000532550 SELENOTP62341 195 aa12.51□□□□□ -0.41
PHRF1-204ENST00000532550 VAMP2P63027 116 aa12.51□□□□□ -0.41
PHRF1-204ENST00000532550 MZT2BQ6NZ67 158 aa12.51□□□□□ -0.41
PHRF1-204ENST00000532550 FOXI2Q6ZQN5 318 aa12.51□□□□□ -0.41
PHRF1-204ENST00000532550 C12orf45Q8N5I9 185 aaPredicted RBP12.51□□□□□ -0.41
PHRF1-204ENST00000532550 Q8NAQ8 132 aa12.51□□□□□ -0.41
PHRF1-204ENST00000532550 SEC22CQ9BRL7 303 aa12.51□□□□□ -0.41
PHRF1-204ENST00000532550 SLC25A32Q9H2D1 315 aa12.51□□□□□ -0.41
PHRF1-204ENST00000532550 SAV1Q9H4B6 383 aaPredicted RBP12.51□□□□□ -0.41
PHRF1-204ENST00000532550 IGHV4-28A0A0C4DH34 117 aa12.5□□□□□ -0.41
PHRF1-204ENST00000532550 C7orf66A4D0T2 115 aa12.5□□□□□ -0.41
PHRF1-204ENST00000532550 A6NHS1 94 aa12.5□□□□□ -0.41
PHRF1-204ENST00000532550 FNDC10F2Z333 226 aa12.5□□□□□ -0.41
PHRF1-204ENST00000532550 SOCS3O14543 225 aa12.5□□□□□ -0.41
PHRF1-204ENST00000532550 HYPMO75409 117 aa12.5□□□□□ -0.41
PHRF1-204ENST00000532550 LY6G6CO95867 125 aa12.5□□□□□ -0.41
PHRF1-204ENST00000532550 IGKV3-20P01619 116 aa12.5□□□□□ -0.41
PHRF1-204ENST00000532550 DEFB1P60022 68 aa12.5□□□□□ -0.41
PHRF1-204ENST00000532550 GDF5OSQ5U4N7 250 aa12.5□□□□□ -0.41
PHRF1-204ENST00000532550 SPATA31B1PQ5VZV4 182 aa12.5□□□□□ -0.41
PHRF1-204ENST00000532550 EBLN2Q6P2I7 272 aa12.5□□□□□ -0.41
PHRF1-204ENST00000532550 S100A7AQ86SG5 101 aa12.5□□□□□ -0.41
PHRF1-204ENST00000532550 OR4B1Q8NGF8 309 aa12.5□□□□□ -0.41
PHRF1-204ENST00000532550 LINC00476Q8WZB0 136 aa12.5□□□□□ -0.41
PHRF1-204ENST00000532550 DOK5Q9P104 306 aa12.5□□□□□ -0.41
PHRF1-204ENST00000532550 HIGD1AQ9Y241 93 aa12.5□□□□□ -0.41
PHRF1-204ENST00000532550 RCL1Q9Y2P8 373 aaKnown RBP12.5□□□□□ -0.41
PHRF1-204ENST00000532550 X6R8D5 127 aa12.5□□□□□ -0.41
PHRF1-204ENST00000532550 OR5G3P0C626 314 aa12.49□□□□□ -0.41
PHRF1-204ENST00000532550 LINC00869P0C866 280 aa12.49□□□□□ -0.41
PHRF1-204ENST00000532550 RBMY1A1P0DJD3 496 aaKnown RBP12.49□□□□□ -0.41
PHRF1-204ENST00000532550 RBMY1CP0DJD4 496 aa12.49□□□□□ -0.41
PHRF1-204ENST00000532550 RBMY1FQ15415 496 aaKnown RBP12.49□□□□□ -0.41
PHRF1-204ENST00000532550 TEPPQ6URK8 271 aa12.49□□□□□ -0.41
PHRF1-204ENST00000532550 GSG1LQ6UXU4 331 aa12.49□□□□□ -0.41
PHRF1-204ENST00000532550 SLC25A39Q9BZJ4 359 aaPredicted RBP12.49□□□□□ -0.41
PHRF1-204ENST00000532550 RPRMQ9NS64 109 aa12.49□□□□□ -0.41
PHRF1-204ENST00000532550 LSM5Q9Y4Y9 91 aaKnown RBP12.49□□□□□ -0.41
PHRF1-204ENST00000532550 BCAP31P51572 246 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms