RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.62□□□□□ -0.39
PPFIA1-222ENST00000532504 CD7P09564 240 aa12.62□□□□□ -0.39
PPFIA1-222ENST00000532504 FXYD7P58549 80 aa12.62□□□□□ -0.39
PPFIA1-222ENST00000532504 SRSF4Q08170 494 aaKnown RBP12.62□□□□□ -0.39
PPFIA1-222ENST00000532504 VSIRQ9H7M9 311 aa12.62□□□□□ -0.39
PPFIA1-222ENST00000532504 CFPP27918 469 aa12.62□□□□□ -0.39
PPFIA1-222ENST00000532504 SPATA31B1PQ5VZV4 182 aa12.62□□□□□ -0.39
PPFIA1-222ENST00000532504 SLC25A39Q9BZJ4 359 aaPredicted RBP12.62□□□□□ -0.39
PPFIA1-222ENST00000532504 OTORQ9NRC9 128 aa12.61□□□□□ -0.39
PPFIA1-222ENST00000532504 MED12LQ86YW9 2145 aa12.61□□□□□ -0.39
PPFIA1-222ENST00000532504 EPG5Q9HCE0 2579 aa12.61□□□□□ -0.39
PPFIA1-222ENST00000532504 M0R2Z0 102 aa12.61□□□□□ -0.39
PPFIA1-222ENST00000532504 ZNF343Q6P1L6 599 aa12.61□□□□□ -0.39
PPFIA1-222ENST00000532504 STPG2Q8N412 459 aa12.61□□□□□ -0.39
PPFIA1-222ENST00000532504 TMEM262E9PQX1 116 aa12.61□□□□□ -0.39
PPFIA1-222ENST00000532504 LINC01619G3V211 115 aa12.61□□□□□ -0.39
PPFIA1-222ENST00000532504 FCN3O75636 299 aa12.61□□□□□ -0.39
PPFIA1-222ENST00000532504 Q6ZN92 141 aa12.6□□□□□ -0.39
PPFIA1-222ENST00000532504 DAZ1Q9NQZ3 744 aaKnown RBP12.6□□□□□ -0.39
PPFIA1-222ENST00000532504 PCNX3Q9H6A9 2034 aa12.6□□□□□ -0.39
PPFIA1-222ENST00000532504 ZNF98A6NK75 572 aa12.6□□□□□ -0.39
PPFIA1-222ENST00000532504 C15orf62A8K5M9 175 aa12.6□□□□□ -0.39
PPFIA1-222ENST00000532504 COX19Q49B96 90 aa12.6□□□□□ -0.39
PPFIA1-222ENST00000532504 OR11H12B2RN74 326 aa12.6□□□□□ -0.39
PPFIA1-222ENST00000532504 NPIPB6E9PJ23 425 aa12.6□□□□□ -0.39
PPFIA1-222ENST00000532504 MGST2Q99735 147 aa12.6□□□□□ -0.39
PPFIA1-222ENST00000532504 LINC00862A6NCI5 91 aa12.59□□□□□ -0.39
PPFIA1-222ENST00000532504 BTF3P20290 206 aaKnown RBP12.59□□□□□ -0.39
PPFIA1-222ENST00000532504 EXOC3-AS1Q8N2X6 119 aa12.59□□□□□ -0.39
PPFIA1-222ENST00000532504 TRGV9Q99603 122 aa12.59□□□□□ -0.39
PPFIA1-222ENST00000532504 TRGC1P0CF51 173 aa12.59□□□□□ -0.39
PPFIA1-222ENST00000532504 PAX1P15863 534 aa12.59□□□□□ -0.39
PPFIA1-222ENST00000532504 CDSNQ15517 529 aa12.59□□□□□ -0.39
PPFIA1-222ENST00000532504 TMEM14EPQ6UXP3 125 aa12.59□□□□□ -0.39
PPFIA1-222ENST00000532504 ZMAT5Q9UDW3 170 aaKnown RBP12.59□□□□□ -0.39
PPFIA1-222ENST00000532504 YTHDF2Q9Y5A9 579 aaKnown RBP12.59□□□□□ -0.39
PPFIA1-222ENST00000532504 SRRM4A7MD48 611 aaKnown RBP12.58□□□□□ -0.39
PPFIA1-222ENST00000532504 UBE2E2Q96LR5 201 aa12.58□□□□□ -0.39
PPFIA1-222ENST00000532504 SDF2L1Q9HCN8 221 aa12.58□□□□□ -0.39
PPFIA1-222ENST00000532504 RFNGQ9Y644 331 aa12.58□□□□□ -0.39
PPFIA1-222ENST00000532504 TBX15Q96SF7 602 aa12.58□□□□□ -0.4
PPFIA1-222ENST00000532504 IGKV2-40A0A087WW87 121 aaPredicted RBP12.58□□□□□ -0.4
PPFIA1-222ENST00000532504 FGF16O43320 207 aa12.58□□□□□ -0.4
PPFIA1-222ENST00000532504 IGKV2D-40P01614 121 aaPredicted RBP12.58□□□□□ -0.4
PPFIA1-222ENST00000532504 BLCAPP62952 87 aa12.58□□□□□ -0.4
PPFIA1-222ENST00000532504 PMS2P11Q13670 270 aa12.58□□□□□ -0.4
PPFIA1-222ENST00000532504 OR8A1Q8NGG7 326 aa12.58□□□□□ -0.4
PPFIA1-222ENST00000532504 SEPSECSQ9HD40 501 aaKnown RBP12.58□□□□□ -0.4
PPFIA1-222ENST00000532504 LEPP41159 167 aa12.58□□□□□ -0.4
PPFIA1-222ENST00000532504 PPIFP30405 207 aaKnown RBP12.57□□□□□ -0.4
PPFIA1-222ENST00000532504 KLK15Q9H2R5 256 aa12.57□□□□□ -0.4
PPFIA1-222ENST00000532504 NDUFA4L2Q9NRX3 87 aa12.57□□□□□ -0.4
PPFIA1-222ENST00000532504 MST1LQ2TV78 715 aa12.57□□□□□ -0.4
PPFIA1-222ENST00000532504 FMC1Q96HJ9 113 aa12.57□□□□□ -0.4
PPFIA1-222ENST00000532504 EPDR1Q9UM22 224 aa12.57□□□□□ -0.4
PPFIA1-222ENST00000532504 WIPF3A6NGB9 483 aa12.57□□□□□ -0.4
PPFIA1-222ENST00000532504 TMEM14BQ9NUH8 114 aa12.57□□□□□ -0.4
PPFIA1-222ENST00000532504 EML6Q6ZMW3 1958 aa12.57□□□□□ -0.4
PPFIA1-222ENST00000532504 NCOA6Q14686 2063 aaPredicted RBP12.57□□□□□ -0.4
PPFIA1-222ENST00000532504 SLC17A3O00476 420 aa12.57□□□□□ -0.4
PPFIA1-222ENST00000532504 OR11H6Q8NGC7 330 aa12.57□□□□□ -0.4
PPFIA1-222ENST00000532504 TMEM250H0YL14 139 aa12.56□□□□□ -0.4
PPFIA1-222ENST00000532504 ZNF506Q5JVG8 444 aa12.56□□□□□ -0.4
PPFIA1-222ENST00000532504 MYOZ3Q8TDC0 251 aa12.56□□□□□ -0.4
PPFIA1-222ENST00000532504 SFRP2Q96HF1 295 aa12.56□□□□□ -0.4
PPFIA1-222ENST00000532504 RIPPLY3P57055 190 aa12.56□□□□□ -0.4
PPFIA1-222ENST00000532504 KIAA1644Q3SXP7 199 aa12.56□□□□□ -0.4
PPFIA1-222ENST00000532504 ATG101Q9BSB4 218 aa12.56□□□□□ -0.4
PPFIA1-222ENST00000532504 RANBP2P49792 3224 aaKnown RBP12.56□□□□□ -0.4
PPFIA1-222ENST00000532504 PRRC2AP48634 2157 aaKnown RBP12.56□□□□□ -0.4
PPFIA1-222ENST00000532504 OVOL1O14753 267 aa12.56□□□□□ -0.4
PPFIA1-222ENST00000532504 DEFB131AP59861 70 aa12.56□□□□□ -0.4
PPFIA1-222ENST00000532504 CYYR1Q96J86 154 aa12.56□□□□□ -0.4
PPFIA1-222ENST00000532504 SRSF8Q9BRL6 282 aaKnown RBP12.56□□□□□ -0.4
PPFIA1-222ENST00000532504 PSG8Q9UQ74 426 aa12.56□□□□□ -0.4
PPFIA1-222ENST00000532504 ZNF462Q96JM2 2506 aa12.56□□□□□ -0.4
PPFIA1-222ENST00000532504 DEFB136Q30KP8 78 aa12.56□□□□□ -0.4
PPFIA1-222ENST00000532504 TOMM20LQ6UXN7 152 aa12.56□□□□□ -0.4
PPFIA1-222ENST00000532504 G0S2P27469 103 aa12.55□□□□□ -0.4
PPFIA1-222ENST00000532504 BCL6BQ8N143 479 aaPredicted RBP12.55□□□□□ -0.4
PPFIA1-222ENST00000532504 JMJD1CQ15652 2540 aa12.55□□□□□ -0.4
PPFIA1-222ENST00000532504 IGKV1-39P01597 117 aa12.55□□□□□ -0.4
PPFIA1-222ENST00000532504 IGKV1D-39P04432 117 aa12.55□□□□□ -0.4
PPFIA1-222ENST00000532504 Q8NFD4 153 aa12.55□□□□□ -0.4
PPFIA1-222ENST00000532504 WT1-ASQ06250 92 aa12.55□□□□□ -0.4
PPFIA1-222ENST00000532504 FABP5P3A8MUU1 101 aa12.55□□□□□ -0.4
PPFIA1-222ENST00000532504 CMC4P56277 68 aaPredicted RBP12.55□□□□□ -0.4
PPFIA1-222ENST00000532504 EIF4E3Q8N5X7 224 aaKnown RBP12.55□□□□□ -0.4
PPFIA1-222ENST00000532504 WNK1Q9H4A3 2382 aa12.54□□□□□ -0.4
PPFIA1-222ENST00000532504 DSCAMO60469 2012 aa12.54□□□□□ -0.4
PPFIA1-222ENST00000532504 TMEM50AO95807 157 aa12.54□□□□□ -0.4
PPFIA1-222ENST00000532504 TOMM40O96008 361 aa12.54□□□□□ -0.4
PPFIA1-222ENST00000532504 TRBV20OR9-2A0A075B6H5 130 aa12.54□□□□□ -0.4
PPFIA1-222ENST00000532504 TNFRSF18Q9Y5U5 241 aa12.54□□□□□ -0.4
PPFIA1-222ENST00000532504 CD5P06127 495 aa12.54□□□□□ -0.4
PPFIA1-222ENST00000532504 CIARTQ8N365 385 aaPredicted RBP12.54□□□□□ -0.4
PPFIA1-222ENST00000532504 NAV3Q8IVL0 2385 aa12.53□□□□□ -0.4
PPFIA1-222ENST00000532504 NPIPB5A8MRT5 1133 aa12.53□□□□□ -0.4
PPFIA1-222ENST00000532504 VN1R17PQ8TDU5 208 aa12.53□□□□□ -0.4
PPFIA1-222ENST00000532504 RPLP1P05386 114 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms