RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 ARTNQ5T4W7 220 aa3.85□□□□□ -1.79
ECHDC1-222ENST00000531967 C9orf57Q5W0N0 161 aa3.85□□□□□ -1.79
ECHDC1-222ENST00000531967 FAM57AQ8TBR7 257 aa3.85□□□□□ -1.79
ECHDC1-222ENST00000531967 SLC25A46Q96AG3 418 aa3.85□□□□□ -1.79
ECHDC1-222ENST00000531967 TOMM6Q96B49 74 aa3.85□□□□□ -1.79
ECHDC1-222ENST00000531967 NPVFQ9HCQ7 196 aa3.85□□□□□ -1.79
ECHDC1-222ENST00000531967 NCKAP5O14513 1909 aa3.84□□□□□ -1.79
ECHDC1-222ENST00000531967 IGHV3-74A0A0B4J1X5 117 aa3.84□□□□□ -1.79
ECHDC1-222ENST00000531967 TRAV41A0A0B4J266 112 aa3.84□□□□□ -1.79
ECHDC1-222ENST00000531967 CCDC179H3BU77 68 aa3.84□□□□□ -1.79
ECHDC1-222ENST00000531967 HINT1P49773 126 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-222ENST00000531967 LINC01547P58512 204 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-222ENST00000531967 TPPP2P59282 170 aa3.84□□□□□ -1.79
ECHDC1-222ENST00000531967 IGFL4Q6B9Z1 124 aa3.84□□□□□ -1.79
ECHDC1-222ENST00000531967 SUMF2Q8NBJ7 301 aa3.84□□□□□ -1.79
ECHDC1-222ENST00000531967 OR5H2Q8NGV7 314 aa3.84□□□□□ -1.79
ECHDC1-222ENST00000531967 MUCL1Q96DR8 90 aa3.84□□□□□ -1.79
ECHDC1-222ENST00000531967 LYZL4Q96KX0 146 aa3.84□□□□□ -1.79
ECHDC1-222ENST00000531967 C2orf50Q96LR7 162 aa3.84□□□□□ -1.79
ECHDC1-222ENST00000531967 LINC00597Q9H2U6 94 aa3.84□□□□□ -1.79
ECHDC1-222ENST00000531967 BANF2Q9H503 90 aa3.84□□□□□ -1.79
ECHDC1-222ENST00000531967 SND1-IT1Q9HBX3 110 aa3.84□□□□□ -1.79
ECHDC1-222ENST00000531967 RALGAPA2Q2PPJ7 1873 aa3.84□□□□□ -1.79
ECHDC1-222ENST00000531967 DOCK7Q96N67 2140 aa3.84□□□□□ -1.79
ECHDC1-222ENST00000531967 LOC285556D6RIA3 1793 aa3.84□□□□□ -1.79
ECHDC1-222ENST00000531967 BRWD3Q6RI45 1802 aa3.84□□□□□ -1.79
ECHDC1-222ENST00000531967 GGT3PA6NGU5 568 aa3.84□□□□□ -1.8
ECHDC1-222ENST00000531967 GGTLC3B5MD39 225 aa3.84□□□□□ -1.8
ECHDC1-222ENST00000531967 ZNF670-ZNF695F2Z2N8 137 aa3.84□□□□□ -1.8
ECHDC1-222ENST00000531967 PIPP12273 146 aaPredicted RBP3.84□□□□□ -1.8
ECHDC1-222ENST00000531967 DIO3P55073 304 aa3.84□□□□□ -1.8
ECHDC1-222ENST00000531967 SAXO1Q8IYX7 474 aa3.84□□□□□ -1.8
ECHDC1-222ENST00000531967 RNF175Q8N4F7 328 aa3.84□□□□□ -1.8
ECHDC1-222ENST00000531967 OR5AK2Q8NH90 309 aa3.84□□□□□ -1.8
ECHDC1-222ENST00000531967 NEUROG1Q92886 237 aa3.84□□□□□ -1.8
ECHDC1-222ENST00000531967 ZNF799Q96GE5 643 aa3.84□□□□□ -1.8
ECHDC1-222ENST00000531967 IGHV1-45A0A0A0MS14 117 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 A0A0J9YXY3 114 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 KANTRA0A1W2PQU2 76 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 TLCD2A6NGC4 264 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 C9JQL5 133 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 FNDC10F2Z333 226 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 H0YJW9 148 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 MEIG1Q5JSS6 88 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 TEX29Q8N6K0 151 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 ZDHHC22Q8N966 263 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 PPTC7Q8NI37 304 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 RPS4Y2Q8TD47 263 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 VOPP1Q96AW1 172 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 OR4C12Q96R67 309 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 GGTLC1Q9BX51 225 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 TAC3Q9UHF0 121 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 FUT9Q9Y231 359 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 TRPM7Q96QT4 1865 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 EP400Q96L91 3159 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 TRIP12Q14669 1992 aaPredicted RBP3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 PATJQ8NI35 1801 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 A0A087WWC5 75 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 OR2T8A6NH00 312 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 IGLL5B9A064 214 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 K7EP34 96 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 HIST1H1DP16402 221 aaKnown RBP3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 KRTAP27-1Q3LI81 207 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 SP6Q3SY56 376 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 Q8NBF4 154 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 VSIG2Q96IQ7 327 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 SDF2Q99470 211 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 TXNL4BQ9NX01 149 aaKnown RBP3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 ATG2AQ2TAZ0 1938 aa3.83□□□□□ -1.8
ECHDC1-222ENST00000531967 SBF1O95248 1867 aa3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 ARRDC5A6NEK1 342 aa3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 UBE2L6O14933 153 aa3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 WISP3O95389 354 aaPredicted RBP3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 SEC11BP0C7V7 166 aa3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 LINC00869P0C866 280 aa3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 IGLC2P0DOY2 106 aa3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 IGLC3P0DOY3 106 aa3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 SRP14P37108 136 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 C1orf140Q5VVS0 124 aa3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 SLC25A34Q6PIV7 304 aa3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 PDPNQ86YL7 162 aa3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 OR2T10Q8NGZ9 312 aa3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 C7orf33Q8WU49 177 aa3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 SNRNP25Q9BV90 132 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 TSSK6Q9BXA6 273 aa3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 COL4A4P53420 1690 aaPredicted RBP3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 GREB1Q4ZG55 1949 aa3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 NUP210LQ5VU65 1888 aa3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 CDC42EP2O14613 210 aa3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 GEMIN2O14893 280 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 ZNF73O43830 326 aaPredicted RBP3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 NCR2O95944 276 aa3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 SDC2P34741 201 aa3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 ELOBQ15370 118 aa3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 AADACL3Q5VUY0 350 aa3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 OR4A5Q8NH83 315 aa3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 DCANP1Q8TF63 244 aa3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 NDUFB11Q9NX14 153 aa3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 CKLFQ9UBR5 152 aa3.82□□□□□ -1.8
ECHDC1-222ENST00000531967 TP73-AS1Q9UF72 201 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms