RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 SMIM17P0DL12 118 aa-0.32□□□□□ -2.46
ATM-217ENST00000531957 COX7CP15954 63 aa-0.32□□□□□ -2.46
ATM-217ENST00000531957 SRP14P37108 136 aaKnown RBP-0.32□□□□□ -2.46
ATM-217ENST00000531957 NKX2-5P52952 324 aaPredicted RBP-0.32□□□□□ -2.46
ATM-217ENST00000531957 AP3S2P59780 193 aa-0.32□□□□□ -2.46
ATM-217ENST00000531957 ACOT6Q3I5F7 207 aaPredicted RBP-0.32□□□□□ -2.46
ATM-217ENST00000531957 GLIPR1L1Q6UWM5 242 aa-0.32□□□□□ -2.46
ATM-217ENST00000531957 Q86TA4 180 aa-0.32□□□□□ -2.46
ATM-217ENST00000531957 ADAT3Q96EY9 351 aaPredicted RBP-0.32□□□□□ -2.46
ATM-217ENST00000531957 C2orf50Q96LR7 162 aa-0.32□□□□□ -2.46
ATM-217ENST00000531957 LINC00467Q9BRT7 94 aa-0.32□□□□□ -2.46
ATM-217ENST00000531957 MRPL27Q9P0M9 148 aaKnown RBP-0.32□□□□□ -2.46
ATM-217ENST00000531957 ANKRD17O75179 2603 aaKnown RBP-0.32□□□□□ -2.46
ATM-217ENST00000531957 PHRF1Q9P1Y6 1649 aaKnown RBP-0.32□□□□□ -2.46
ATM-217ENST00000531957 WRNQ14191 1432 aaPredicted RBP eCLIP-0.32□□□□□ -2.46
ATM-217ENST00000531957 FANCMQ8IYD8 2048 aa-0.33□□□□□ -2.46
ATM-217ENST00000531957 SULT1A1P50225 295 aa-0.33□□□□□ -2.46
ATM-217ENST00000531957 CCDC122Q5T0U0 273 aa-0.33□□□□□ -2.46
ATM-217ENST00000531957 PTH2Q96A98 100 aa-0.33□□□□□ -2.46
ATM-217ENST00000531957 OPTCQ9UBM4 332 aa-0.33□□□□□ -2.46
ATM-217ENST00000531957 UBR5O95071 2799 aaPredicted RBP-0.34□□□□□ -2.46
ATM-217ENST00000531957 SCN8AQ9UQD0 1980 aa-0.34□□□□□ -2.46
ATM-217ENST00000531957 FREM3P0C091 2139 aa-0.34□□□□□ -2.46
ATM-217ENST00000531957 ZGRF1Q86YA3 2104 aa-0.34□□□□□ -2.46
ATM-217ENST00000531957 CECR2Q9BXF3 1484 aa-0.34□□□□□ -2.46
ATM-217ENST00000531957 CELSR1Q9NYQ6 3014 aa-0.34□□□□□ -2.46
ATM-217ENST00000531957 hCG_1818297A0A087WSY0 165 aa-0.34□□□□□ -2.46
ATM-217ENST00000531957 A8MT66 165 aa-0.34□□□□□ -2.46
ATM-217ENST00000531957 HIST1H1EP10412 219 aaKnown RBP-0.34□□□□□ -2.46
ATM-217ENST00000531957 CCL4P13236 92 aa-0.34□□□□□ -2.46
ATM-217ENST00000531957 OR2F1Q13607 317 aa-0.34□□□□□ -2.46
ATM-217ENST00000531957 Q6ZQY7 126 aa-0.34□□□□□ -2.46
ATM-217ENST00000531957 CMSS1Q9BQ75 279 aaKnown RBP-0.34□□□□□ -2.46
ATM-217ENST00000531957 NKIRAS1Q9NYS0 192 aa-0.34□□□□□ -2.46
ATM-217ENST00000531957 UNC79Q9P2D8 2635 aa-0.34□□□□□ -2.46
ATM-217ENST00000531957 HMCN2Q8NDA2 5059 aa-0.34□□□□□ -2.46
ATM-217ENST00000531957 PLXND1Q9Y4D7 1925 aa-0.34□□□□□ -2.46
ATM-217ENST00000531957 HECW1Q76N89 1606 aa-0.35□□□□□ -2.46
ATM-217ENST00000531957 TRGV10A0A0A0MS01 117 aa-0.35□□□□□ -2.47
ATM-217ENST00000531957 FAM236DA0A1B0GTK5 79 aa-0.35□□□□□ -2.47
ATM-217ENST00000531957 A8MWV9 139 aa-0.35□□□□□ -2.47
ATM-217ENST00000531957 E7EUB6 86 aa-0.35□□□□□ -2.47
ATM-217ENST00000531957 GPR31O00270 319 aa-0.35□□□□□ -2.47
ATM-217ENST00000531957 SPINK1P00995 79 aa-0.35□□□□□ -2.47
ATM-217ENST00000531957 TPM3P06753 285 aa-0.35□□□□□ -2.47
ATM-217ENST00000531957 CD14P08571 375 aa-0.35□□□□□ -2.47
ATM-217ENST00000531957 FAM236CP0DP71 79 aa-0.35□□□□□ -2.47
ATM-217ENST00000531957 CXCL8P10145 99 aa-0.35□□□□□ -2.47
ATM-217ENST00000531957 PPIBP23284 216 aaKnown RBP-0.35□□□□□ -2.47
ATM-217ENST00000531957 PDZD9Q8IXQ8 264 aa-0.35□□□□□ -2.47
ATM-217ENST00000531957 OR6V1Q8N148 313 aa-0.35□□□□□ -2.47
ATM-217ENST00000531957 OR10K1Q8NGX5 313 aa-0.35□□□□□ -2.47
ATM-217ENST00000531957 SLC25A40Q8TBP6 338 aa-0.35□□□□□ -2.47
ATM-217ENST00000531957 CT55Q8WUE5 264 aa-0.35□□□□□ -2.47
ATM-217ENST00000531957 PLAC4Q8WY50 150 aa-0.35□□□□□ -2.47
ATM-217ENST00000531957 C8orf76Q96K31 380 aa-0.35□□□□□ -2.47
ATM-217ENST00000531957 SLC25A21Q9BQT8 299 aaPredicted RBP-0.35□□□□□ -2.47
ATM-217ENST00000531957 PBOV1Q9GZY1 135 aa-0.35□□□□□ -2.47
ATM-217ENST00000531957 TVP23BQ9NYZ1 205 aa-0.35□□□□□ -2.47
ATM-217ENST00000531957 OR52A1Q9UKL2 312 aa-0.35□□□□□ -2.47
ATM-217ENST00000531957 TTRP02766 147 aa-0.36□□□□□ -2.47
ATM-217ENST00000531957 DSCR4P56555 118 aaPredicted RBP-0.36□□□□□ -2.47
ATM-217ENST00000531957 FXYD4P59646 89 aa-0.36□□□□□ -2.47
ATM-217ENST00000531957 DEFA3P59666 94 aa-0.36□□□□□ -2.47
ATM-217ENST00000531957 CDK6Q00534 326 aa-0.36□□□□□ -2.47
ATM-217ENST00000531957 KRR1Q13601 381 aaKnown RBP-0.36□□□□□ -2.47
ATM-217ENST00000531957 LYRM7Q5U5X0 104 aa-0.36□□□□□ -2.47
ATM-217ENST00000531957 Q8TAT8 98 aa-0.36□□□□□ -2.47
ATM-217ENST00000531957 TCEAL2Q9H3H9 227 aaPredicted RBP-0.36□□□□□ -2.47
ATM-217ENST00000531957 VPS29Q9UBQ0 182 aa-0.36□□□□□ -2.47
ATM-217ENST00000531957 GUCA1BQ9UMX6 200 aa-0.36□□□□□ -2.47
ATM-217ENST00000531957 RIMBP3CA6NJZ7 1639 aa-0.36□□□□□ -2.47
ATM-217ENST00000531957 RIMBP3BA6NNM3 1639 aa-0.36□□□□□ -2.47
ATM-217ENST00000531957 RIMBP3Q9UFD9 1639 aa-0.36□□□□□ -2.47
ATM-217ENST00000531957 NEO1Q92859 1461 aa-0.36□□□□□ -2.47
ATM-217ENST00000531957 SIP14410 1827 aa-0.36□□□□□ -2.47
ATM-217ENST00000531957 LOC285556D6RIA3 1793 aa-0.37□□□□□ -2.47
ATM-217ENST00000531957 NDUFB3O43676 98 aa-0.37□□□□□ -2.47
ATM-217ENST00000531957 CHP2O43745 196 aa-0.37□□□□□ -2.47
ATM-217ENST00000531957 ROMO1P60602 79 aa-0.37□□□□□ -2.47
ATM-217ENST00000531957 Q6Q795 121 aa-0.37□□□□□ -2.47
ATM-217ENST00000531957 PRR15Q8IV56 129 aa-0.37□□□□□ -2.47
ATM-217ENST00000531957 YPEL2Q96QA6 119 aa-0.37□□□□□ -2.47
ATM-217ENST00000531957 GGACTQ9BVM4 153 aa-0.37□□□□□ -2.47
ATM-217ENST00000531957 HSPB8Q9UJY1 196 aa-0.37□□□□□ -2.47
ATM-217ENST00000531957 ATP6V1DQ9Y5K8 247 aa-0.37□□□□□ -2.47
ATM-217ENST00000531957 ROBO3Q96MS0 1386 aa-0.37□□□□□ -2.47
ATM-217ENST00000531957 BCL9O00512 1426 aa-0.38□□□□□ -2.47
ATM-217ENST00000531957 MYH7BA7E2Y1 1941 aa-0.38□□□□□ -2.47
ATM-217ENST00000531957 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-0.38□□□□□ -2.47
ATM-217ENST00000531957 M0QX08 132 aa-0.38□□□□□ -2.47
ATM-217ENST00000531957 M0R233 179 aa-0.38□□□□□ -2.47
ATM-217ENST00000531957 CNIH1O95406 144 aa-0.38□□□□□ -2.47
ATM-217ENST00000531957 TPM4P67936 248 aa-0.38□□□□□ -2.47
ATM-217ENST00000531957 MYL5Q02045 173 aa-0.38□□□□□ -2.47
ATM-217ENST00000531957 RAB37Q96AX2 223 aa-0.38□□□□□ -2.47
ATM-217ENST00000531957 BORCS7Q96B45 105 aa-0.38□□□□□ -2.47
ATM-217ENST00000531957 MUCL1Q96DR8 90 aa-0.38□□□□□ -2.47
ATM-217ENST00000531957 NOSIPQ9Y314 301 aaKnown RBP-0.38□□□□□ -2.47
ATM-217ENST00000531957 HECW2Q9P2P5 1572 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms