RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 PITX3O75364 302 aa6.31□□□□□ -1.4
USF1-210ENST00000531842 AKR1C4P17516 323 aa6.31□□□□□ -1.4
USF1-210ENST00000531842 DLK1P80370 383 aa6.31□□□□□ -1.4
USF1-210ENST00000531842 USF2Q15853 346 aaPredicted RBP6.31□□□□□ -1.4
USF1-210ENST00000531842 RNF212Q495C1 297 aa6.31□□□□□ -1.4
USF1-210ENST00000531842 C2orf83Q53S99 150 aa6.31□□□□□ -1.4
USF1-210ENST00000531842 SIGLEC15Q6ZMC9 328 aa6.31□□□□□ -1.4
USF1-210ENST00000531842 ZNF705AQ6ZN79 300 aaPredicted RBP6.31□□□□□ -1.4
USF1-210ENST00000531842 TOMM5Q8N4H5 51 aa6.31□□□□□ -1.4
USF1-210ENST00000531842 GLMPQ8WWB7 406 aa6.31□□□□□ -1.4
USF1-210ENST00000531842 IL22RA2Q969J5 263 aa6.31□□□□□ -1.4
USF1-210ENST00000531842 LINC00052Q96N35 136 aa6.31□□□□□ -1.4
USF1-210ENST00000531842 NIPSNAP3BQ9BS92 247 aa6.31□□□□□ -1.4
USF1-210ENST00000531842 PBDC1Q9BVG4 233 aa6.31□□□□□ -1.4
USF1-210ENST00000531842 NRN1Q9NPD7 142 aa6.31□□□□□ -1.4
USF1-210ENST00000531842 CACFD1Q9UGQ2 172 aa6.31□□□□□ -1.4
USF1-210ENST00000531842 PFDN2Q9UHV9 154 aa6.31□□□□□ -1.4
USF1-210ENST00000531842 SCP2D1Q9UJQ7 156 aa6.31□□□□□ -1.4
USF1-210ENST00000531842 FLVCR2Q9UPI3 526 aa6.31□□□□□ -1.4
USF1-210ENST00000531842 U3KQE9 123 aa6.31□□□□□ -1.4
USF1-210ENST00000531842 A0A0B4J2A0 478 aa6.3□□□□□ -1.4
USF1-210ENST00000531842 ZNF705FA8MVS1 300 aaPredicted RBP6.3□□□□□ -1.4
USF1-210ENST00000531842 PLA2G10O15496 165 aa6.3□□□□□ -1.4
USF1-210ENST00000531842 ZNF705DP0CH99 300 aaPredicted RBP6.3□□□□□ -1.4
USF1-210ENST00000531842 ZNF705BP0CI00 300 aaPredicted RBP6.3□□□□□ -1.4
USF1-210ENST00000531842 SULT1A3P0DMM9 295 aa6.3□□□□□ -1.4
USF1-210ENST00000531842 SULT1A4P0DMN0 295 aa6.3□□□□□ -1.4
USF1-210ENST00000531842 INAFM2P0DMQ5 153 aa6.3□□□□□ -1.4
USF1-210ENST00000531842 S100A5P33763 92 aa6.3□□□□□ -1.4
USF1-210ENST00000531842 PPP1R1AQ13522 171 aa6.3□□□□□ -1.4
USF1-210ENST00000531842 OR51G1Q8NGK1 321 aa6.3□□□□□ -1.4
USF1-210ENST00000531842 ZNRF2Q8NHG8 242 aa6.3□□□□□ -1.4
USF1-210ENST00000531842 PPP1R14BQ96C90 147 aa6.3□□□□□ -1.4
USF1-210ENST00000531842 SLC35B3Q9H1N7 401 aa6.3□□□□□ -1.4
USF1-210ENST00000531842 HSPB7Q9UBY9 170 aa6.3□□□□□ -1.4
USF1-210ENST00000531842 SHPKQ9UHJ6 478 aa6.3□□□□□ -1.4
USF1-210ENST00000531842 KCNIP3Q9Y2W7 256 aa6.3□□□□□ -1.4
USF1-210ENST00000531842 YTHDF2Q9Y5A9 579 aaKnown RBP6.3□□□□□ -1.4
USF1-210ENST00000531842 ZFP92A6NM28 416 aa6.29□□□□□ -1.4
USF1-210ENST00000531842 F6UB75 175 aa6.29□□□□□ -1.4
USF1-210ENST00000531842 BUB3O43684 328 aa6.29□□□□□ -1.4
USF1-210ENST00000531842 TOMM40O96008 361 aa6.29□□□□□ -1.4
USF1-210ENST00000531842 PSG1P11464 419 aa6.29□□□□□ -1.4
USF1-210ENST00000531842 NUP62P37198 522 aaPredicted RBP6.29□□□□□ -1.4
USF1-210ENST00000531842 ID1P41134 155 aa6.29□□□□□ -1.4
USF1-210ENST00000531842 FCN2Q15485 313 aa6.29□□□□□ -1.4
USF1-210ENST00000531842 TMEM128Q5BJH2 165 aa6.29□□□□□ -1.4
USF1-210ENST00000531842 TMED4Q7Z7H5 227 aa6.29□□□□□ -1.4
USF1-210ENST00000531842 LGI3Q8N145 548 aa6.29□□□□□ -1.4
USF1-210ENST00000531842 C1orf158Q8N1D5 194 aa6.29□□□□□ -1.4
USF1-210ENST00000531842 LRTM2Q8N967 370 aa6.29□□□□□ -1.4
USF1-210ENST00000531842 ZNF709Q8N972 641 aa6.29□□□□□ -1.4
USF1-210ENST00000531842 COQ8AQ8NI60 647 aa6.29□□□□□ -1.4
USF1-210ENST00000531842 DTD1Q8TEA8 209 aa6.29□□□□□ -1.4
USF1-210ENST00000531842 RBKSQ9H477 322 aa6.29□□□□□ -1.4
USF1-210ENST00000531842 SEPSECSQ9HD40 501 aaKnown RBP6.29□□□□□ -1.4
USF1-210ENST00000531842 TMED3Q9Y3Q3 217 aa6.29□□□□□ -1.4
USF1-210ENST00000531842 U3KQ87 197 aa6.29□□□□□ -1.4
USF1-210ENST00000531842 UBR4Q5T4S7 5183 aa6.28□□□□□ -1.4
USF1-210ENST00000531842 LOC102723971A0A1B0GUV8 181 aa6.28□□□□□ -1.4
USF1-210ENST00000531842 LINC00854A0A1B0GVQ3 168 aa6.28□□□□□ -1.4
USF1-210ENST00000531842 TMEM189A5PLL7 270 aa6.28□□□□□ -1.4
USF1-210ENST00000531842 A6NHS1 94 aa6.28□□□□□ -1.4
USF1-210ENST00000531842 EPM2AB3EWF7 344 aa6.28□□□□□ -1.4
USF1-210ENST00000531842 NDUFB6O95139 128 aa6.28□□□□□ -1.4
USF1-210ENST00000531842 SFT2D2O95562 160 aa6.28□□□□□ -1.4
USF1-210ENST00000531842 NUDT3O95989 172 aa6.28□□□□□ -1.4
USF1-210ENST00000531842 FABP1P07148 127 aa6.28□□□□□ -1.4
USF1-210ENST00000531842 PRB4P10163 310 aaPredicted RBP6.28□□□□□ -1.4
USF1-210ENST00000531842 IL7P13232 177 aa6.28□□□□□ -1.4
USF1-210ENST00000531842 HLA-DRB4P13762 266 aa6.28□□□□□ -1.4
USF1-210ENST00000531842 NKX2-1P43699 371 aaPredicted RBP6.28□□□□□ -1.4
USF1-210ENST00000531842 SPANXN2Q5MJ10 180 aa6.28□□□□□ -1.4
USF1-210ENST00000531842 OR4B1Q8NGF8 309 aa6.28□□□□□ -1.4
USF1-210ENST00000531842 DEDD2Q8WXF8 326 aa6.28□□□□□ -1.4
USF1-210ENST00000531842 RNF125Q96EQ8 232 aa6.28□□□□□ -1.4
USF1-210ENST00000531842 SCGB3A2Q96PL1 93 aa6.28□□□□□ -1.4
USF1-210ENST00000531842 UHRF2Q96PU4 802 aa6.28□□□□□ -1.4
USF1-210ENST00000531842 C7orf50Q9BRJ6 194 aaKnown RBP6.28□□□□□ -1.4
USF1-210ENST00000531842 ATG101Q9BSB4 218 aa6.28□□□□□ -1.4
USF1-210ENST00000531842 WDR12Q9GZL7 423 aaKnown RBP6.28□□□□□ -1.4
USF1-210ENST00000531842 MDFICQ9P1T7 246 aa6.28□□□□□ -1.4
USF1-210ENST00000531842 PAIP2BQ9ULR5 123 aaKnown RBP6.28□□□□□ -1.4
USF1-210ENST00000531842 LINC00588Q9Y4M8 146 aa6.28□□□□□ -1.4
USF1-210ENST00000531842 RFNGQ9Y644 331 aa6.28□□□□□ -1.4
USF1-210ENST00000531842 HLA-DRB4X5D2U9 266 aa6.28□□□□□ -1.4
USF1-210ENST00000531842 IGKV1D-37A0A075B6S9 117 aa6.27□□□□□ -1.41
USF1-210ENST00000531842 SMIM9A6NGZ8 99 aa6.27□□□□□ -1.41
USF1-210ENST00000531842 SNRPGP15A8MWD9 76 aa6.27□□□□□ -1.41
USF1-210ENST00000531842 PRSS46E5RG02 174 aa6.27□□□□□ -1.41
USF1-210ENST00000531842 ADAP1O75689 374 aa6.27□□□□□ -1.41
USF1-210ENST00000531842 ANXA3P12429 323 aa6.27□□□□□ -1.41
USF1-210ENST00000531842 ANXA7P20073 488 aaKnown RBP6.27□□□□□ -1.41
USF1-210ENST00000531842 GPX4P36969 197 aaPredicted RBP6.27□□□□□ -1.41
USF1-210ENST00000531842 AP3S2P59780 193 aa6.27□□□□□ -1.41
USF1-210ENST00000531842 LYZP61626 148 aa6.27□□□□□ -1.41
USF1-210ENST00000531842 DAD1P61803 113 aa6.27□□□□□ -1.41
USF1-210ENST00000531842 HAMPP81172 84 aa6.27□□□□□ -1.41
USF1-210ENST00000531842 OR2F1Q13607 317 aa6.27□□□□□ -1.41
USF1-210ENST00000531842 SMCO1Q147U7 214 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms