RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 PFDN5Q99471 154 aa2.02□□□□□ -2.09
USP47-211ENST00000531513 SLC25A21Q9BQT8 299 aaPredicted RBP2.02□□□□□ -2.09
USP47-211ENST00000531513 YIPF3Q9GZM5 350 aa2.02□□□□□ -2.09
USP47-211ENST00000531513 TCEAL2Q9H3H9 227 aaPredicted RBP2.02□□□□□ -2.09
USP47-211ENST00000531513 MED31Q9Y3C7 131 aa2.02□□□□□ -2.09
USP47-211ENST00000531513 CAMSAP2Q08AD1 1489 aa2.01□□□□□ -2.09
USP47-211ENST00000531513 NCOA3Q9Y6Q9 1424 aa2.01□□□□□ -2.09
USP47-211ENST00000531513 CEP152O94986 1710 aa2.01□□□□□ -2.09
USP47-211ENST00000531513 TRAV5A0A0B4J249 113 aa2.01□□□□□ -2.09
USP47-211ENST00000531513 TRDV1A0A1B0GX56 115 aa2.01□□□□□ -2.09
USP47-211ENST00000531513 IBA57-AS1B1ANH7 110 aa2.01□□□□□ -2.09
USP47-211ENST00000531513 OVOL1O14753 267 aa2.01□□□□□ -2.09
USP47-211ENST00000531513 PMP2P02689 132 aa2.01□□□□□ -2.09
USP47-211ENST00000531513 C1QCP02747 245 aa2.01□□□□□ -2.09
USP47-211ENST00000531513 RPL7P18124 248 aaKnown RBP2.01□□□□□ -2.09
USP47-211ENST00000531513 SDC4P31431 198 aa2.01□□□□□ -2.09
USP47-211ENST00000531513 S100A11P31949 105 aa2.01□□□□□ -2.09
USP47-211ENST00000531513 NDUFA6P56556 154 aa2.01□□□□□ -2.09
USP47-211ENST00000531513 CKS1BP61024 79 aa2.01□□□□□ -2.09
USP47-211ENST00000531513 MYL5Q02045 173 aa2.01□□□□□ -2.09
USP47-211ENST00000531513 TMEM155Q4W5P6 130 aa2.01□□□□□ -2.09
USP47-211ENST00000531513 C22orf39Q6P5X5 142 aa2.01□□□□□ -2.09
USP47-211ENST00000531513 TMEM229BQ8NBD8 167 aa2.01□□□□□ -2.09
USP47-211ENST00000531513 AQP3Q92482 292 aa2.01□□□□□ -2.09
USP47-211ENST00000531513 BORCS8Q96FH0 119 aa2.01□□□□□ -2.09
USP47-211ENST00000531513 TPT1P8Q9HAU6 139 aa2.01□□□□□ -2.09
USP47-211ENST00000531513 NHP2Q9NX24 153 aaKnown RBP2.01□□□□□ -2.09
USP47-211ENST00000531513 COPZ2Q9P299 210 aa2.01□□□□□ -2.09
USP47-211ENST00000531513 MED23Q9ULK4 1368 aa2□□□□□ -2.09
USP47-211ENST00000531513 IGKV1D-42A0A075B6H8 117 aa2□□□□□ -2.09
USP47-211ENST00000531513 TMEM256-PLSCR3K7ERE1 68 aa2□□□□□ -2.09
USP47-211ENST00000531513 CST7O76096 145 aa2□□□□□ -2.09
USP47-211ENST00000531513 CTSDP07339 412 aaPredicted RBP2□□□□□ -2.09
USP47-211ENST00000531513 SCTP09683 121 aa2□□□□□ -2.09
USP47-211ENST00000531513 COX4I1P13073 169 aa2□□□□□ -2.09
USP47-211ENST00000531513 RPS3P23396 243 aaKnown RBP eCLIP2□□□□□ -2.09
USP47-211ENST00000531513 ZNF826PQ6ZT77 177 aa2□□□□□ -2.09
USP47-211ENST00000531513 C7orf65Q6ZTY9 151 aa2□□□□□ -2.09
USP47-211ENST00000531513 OR8I2Q8N0Y5 310 aa2□□□□□ -2.09
USP47-211ENST00000531513 OR2T10Q8NGZ9 312 aa2□□□□□ -2.09
USP47-211ENST00000531513 RNASE11Q8TAA1 199 aaKnown RBP2□□□□□ -2.09
USP47-211ENST00000531513 LXNQ9BS40 222 aa2□□□□□ -2.09
USP47-211ENST00000531513 LHFPL6Q9Y693 200 aa2□□□□□ -2.09
USP47-211ENST00000531513 PEG3Q9GZU2 1588 aa2□□□□□ -2.09
USP47-211ENST00000531513 CCDC88AQ3V6T2 1871 aa2□□□□□ -2.09
USP47-211ENST00000531513 DISP1Q96F81 1524 aa2□□□□□ -2.09
USP47-211ENST00000531513 STRCQ7RTU9 1775 aa2□□□□□ -2.09
USP47-211ENST00000531513 NCAPD3P42695 1498 aa2□□□□□ -2.09
USP47-211ENST00000531513 ERCC6Q03468 1493 aa2□□□□□ -2.09
USP47-211ENST00000531513 TECPR2O15040 1411 aa2□□□□□ -2.09
USP47-211ENST00000531513 CD109Q6YHK3 1445 aa2□□□□□ -2.09
USP47-211ENST00000531513 MYH11P35749 1972 aa1.99□□□□□ -2.09
USP47-211ENST00000531513 DENND4CQ5VZ89 1909 aa1.99□□□□□ -2.09
USP47-211ENST00000531513 RIMBP3CA6NJZ7 1639 aa1.99□□□□□ -2.09
USP47-211ENST00000531513 RIMBP3BA6NNM3 1639 aa1.99□□□□□ -2.09
USP47-211ENST00000531513 RIMBP3Q9UFD9 1639 aa1.99□□□□□ -2.09
USP47-211ENST00000531513 GLI3P10071 1580 aa1.99□□□□□ -2.09
USP47-211ENST00000531513 OR2T1O43869 369 aa1.99□□□□□ -2.09
USP47-211ENST00000531513 SULT1C4O75897 302 aa1.99□□□□□ -2.09
USP47-211ENST00000531513 FKBP2P26885 142 aaKnown RBP1.99□□□□□ -2.09
USP47-211ENST00000531513 INSL3P51460 131 aa1.99□□□□□ -2.09
USP47-211ENST00000531513 DYNLT3P51808 116 aa1.99□□□□□ -2.09
USP47-211ENST00000531513 MORN2Q502X0 79 aa1.99□□□□□ -2.09
USP47-211ENST00000531513 C9orf163Q8N9P6 203 aa1.99□□□□□ -2.09
USP47-211ENST00000531513 PRADC1Q9BSG0 188 aa1.99□□□□□ -2.09
USP47-211ENST00000531513 ADAT1Q9BUB4 502 aaKnown RBP1.99□□□□□ -2.09
USP47-211ENST00000531513 MRPL32Q9BYC8 188 aaKnown RBP1.99□□□□□ -2.09
USP47-211ENST00000531513 OR2H1Q9GZK4 316 aa1.99□□□□□ -2.09
USP47-211ENST00000531513 CST9LQ9H4G1 147 aa1.99□□□□□ -2.09
USP47-211ENST00000531513 POPDC3Q9HBV1 291 aa1.99□□□□□ -2.09
USP47-211ENST00000531513 TMEM106BQ9NUM4 274 aa1.99□□□□□ -2.09
USP47-211ENST00000531513 HSPB8Q9UJY1 196 aa1.99□□□□□ -2.09
USP47-211ENST00000531513 CUL9Q8IWT3 2517 aa1.98□□□□□ -2.09
USP47-211ENST00000531513 NDUFB3O43676 98 aa1.98□□□□□ -2.09
USP47-211ENST00000531513 NDUFA2O43678 99 aa1.98□□□□□ -2.09
USP47-211ENST00000531513 ZNF737O75373 536 aa1.98□□□□□ -2.09
USP47-211ENST00000531513 LYZL6O75951 148 aa1.98□□□□□ -2.09
USP47-211ENST00000531513 HLA-EP13747 358 aa1.98□□□□□ -2.09
USP47-211ENST00000531513 CMPK1P30085 196 aa1.98□□□□□ -2.09
USP47-211ENST00000531513 SDC2P34741 201 aa1.98□□□□□ -2.09
USP47-211ENST00000531513 SPANXN5Q5MJ07 72 aa1.98□□□□□ -2.09
USP47-211ENST00000531513 EIF5AL1Q6IS14 154 aaKnown RBP1.98□□□□□ -2.09
USP47-211ENST00000531513 PHF5AQ7RTV0 110 aaKnown RBP1.98□□□□□ -2.09
USP47-211ENST00000531513 TCTE3Q8IZS6 198 aa1.98□□□□□ -2.09
USP47-211ENST00000531513 SLC30A7Q8NEW0 376 aa1.98□□□□□ -2.09
USP47-211ENST00000531513 OR8J3Q8NGG0 315 aa1.98□□□□□ -2.09
USP47-211ENST00000531513 C1orf54Q8WWF1 131 aa1.98□□□□□ -2.09
USP47-211ENST00000531513 TAS2R4Q9NYW5 299 aa1.98□□□□□ -2.09
USP47-211ENST00000531513 NAT8BQ9UHF3 227 aa1.98□□□□□ -2.09
USP47-211ENST00000531513 TRAPPC2LQ9UL33 140 aa1.98□□□□□ -2.09
USP47-211ENST00000531513 SOGA1O94964 1423 aa1.98□□□□□ -2.09
USP47-211ENST00000531513 HIVEP2P31629 2446 aa1.98□□□□□ -2.09
USP47-211ENST00000531513 STRCP1A6NGW2 1772 aa1.98□□□□□ -2.09
USP47-211ENST00000531513 UBR2Q8IWV8 1755 aa1.98□□□□□ -2.09
USP47-211ENST00000531513 MYH3P11055 1940 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 MYH2Q9UKX2 1941 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 ARHGEF28Q8N1W1 1705 aaKnown RBP1.97□□□□□ -2.09
USP47-211ENST00000531513 ADGBQ8N7X0 1667 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 MEIKINA0A087WXM9 373 aa1.97□□□□□ -2.09
USP47-211ENST00000531513 IGHV1-58A0A0C4DH39 117 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms